RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 ZNF295-AS1Q8N0V1 137 aa4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 CNKSR1Q969H4 720 aa4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 ARHGEF10LQ9HCE6 1279 aa4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 TFIP11Q9UBB9 837 aaKnown RBP4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 ZNF777Q9ULD5 760 aaPredicted RBP4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 SENP3-EIF4A1A0A087X0R7 540 aa4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 H3BM21 787 aa4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 MAN1A2O60476 641 aa4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 GMPRP36959 345 aa4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 CENPCQ03188 943 aa4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 KANK4Q5T7N3 995 aaPredicted RBP4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 LYSMD3Q7Z3D4 306 aa4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 TRIM50Q86XT4 487 aa4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 SIX5Q8N196 739 aa4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 LARGE2Q8N3Y3 721 aa4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 POLMQ9NP87 494 aaPredicted RBP4.89□□□□□ -1.63
RNU6-541P-201ENST00000384709 SOBPA7XYQ1 873 aa4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 ATP1A2P50993 1020 aa4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 EPHA4P54764 986 aa4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 GDF10P55107 478 aa4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 GTF2IP78347 998 aa4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 CLDN10P78369 228 aa4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 PTSQ03393 145 aa4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 PPARGC1BQ86YN6 1023 aaKnown RBP4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 NANOS1Q8WY41 292 aaKnown RBP4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 NLRP3Q96P20 1036 aa4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 ESF1Q9H501 851 aaKnown RBP4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 MKRN1Q9UHC7 482 aaKnown RBP4.88□□□□□ -1.63
RNU6-541P-201ENST00000384709 FAM196BA6NMK8 535 aa4.87□□□□□ -1.63
RNU6-541P-201ENST00000384709 PPFIA3O75145 1194 aa4.87□□□□□ -1.63
RNU6-541P-201ENST00000384709 GDF11O95390 407 aa4.87□□□□□ -1.63
RNU6-541P-201ENST00000384709 SMTNP53814 917 aa4.87□□□□□ -1.63
RNU6-541P-201ENST00000384709 POTEAQ6S8J7 498 aa4.87□□□□□ -1.63
RNU6-541P-201ENST00000384709 DEPDC4Q8N2C3 294 aa4.87□□□□□ -1.63
RNU6-541P-201ENST00000384709 RAB6BQ9NRW1 208 aa4.87□□□□□ -1.63
RNU6-541P-201ENST00000384709 IQSEC3Q9UPP2 1182 aaPredicted RBP4.87□□□□□ -1.63
RNU6-541P-201ENST00000384709 KIAA1024Q9UPX6 916 aa4.87□□□□□ -1.63
RNU6-541P-201ENST00000384709 FIGNL2A6NMB9 653 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 MEN1O00255 615 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 CDK2AP1O14519 115 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 BACH1O14867 736 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 STAU1O95793 577 aaKnown RBP4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 FOXK2Q01167 660 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 PTK7Q13308 1070 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 NBPF10Q6P3W6 841 aaKnown RBP4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 OGFOD1Q8N543 542 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 NBPF15Q8N660 670 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 GMCL1Q96IK5 515 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 DYRK1BQ9Y463 629 aa4.86□□□□□ -1.63
RNU6-541P-201ENST00000384709 A6NJY4 79 aa4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 ELOAQ14241 798 aaKnown RBP4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 CCDC102BQ68D86 513 aa4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 C14orf37Q86TY3 774 aa4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 CCDC155Q8N6L0 562 aa4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 RHBDD1Q8TEB9 315 aa4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 ZSCAN10Q96SZ4 725 aaPredicted RBP4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 DNAAF2Q9NVR5 837 aaKnown RBP4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 ZNF358Q9NW07 568 aa4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 SERPINA10Q9UK55 444 aa4.85□□□□□ -1.63
RNU6-541P-201ENST00000384709 ITGA6P23229 1130 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 LMOD1P29536 600 aaPredicted RBP4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 RASSF7Q02833 373 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 TLR1Q15399 786 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 C4orf17Q53FE4 359 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 SLC27A3Q5K4L6 730 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 TAS1R3Q7RTX0 852 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 PRICKLE2Q7Z3G6 844 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 SLC16A10Q8TF71 515 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 ARXQ96QS3 562 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 C1orf115Q9H7X2 142 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 VRTNQ9H8Y1 702 aa4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 SCHIP1Q9P0W5 487 aaPredicted RBP4.84□□□□□ -1.63
RNU6-541P-201ENST00000384709 USP17L15C9J2P7 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L10C9JJH3 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L13C9JLJ4 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L12C9JPN9 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L11C9JVI0 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L21D6R901 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L18D6R9N7 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L22D6RA61 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L17D6RBQ6 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L19D6RCP7 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L20D6RJB6 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP17L24Q0WX57 530 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 POU4F2Q12837 409 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 CRTC2Q53ET0 693 aaPredicted RBP4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 STAG2Q8N3U4 1231 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 GAS2L2Q8NHY3 880 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
RNU6-541P-201ENST00000384709 ERBB4Q15303 1308 aa4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 ATG7O95352 703 aa4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 HIRAP54198 1017 aaPredicted RBP4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 LBRQ14739 615 aaKnown RBP4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 TEAD4Q15561 434 aa4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 ANKMY2Q8IV38 441 aa4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 TPCN2Q8NHX9 752 aa4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 C1orf216Q8TAB5 229 aa4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 C7orf43Q8WVR3 580 aa4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 IRF7Q92985 503 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms