RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 RRP12Q5JTH9 1297 aaKnown RBP7.95□□□□□ -1.14
NEDD9-202ENST00000379446 RILPL2Q969X0 211 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 IFIT1P09914 478 aaKnown RBP7.95□□□□□ -1.14
NEDD9-202ENST00000379446 OTUD7BQ6GQQ9 843 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 PLCD3Q8N3E9 789 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 TESK2Q96S53 571 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 KDM2BQ8NHM5 1336 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 HSP90AB2PQ58FF8 381 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 CCDC158Q5M9N0 1113 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 TTC39AQ5SRH9 613 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 PRAG1Q86YV5 1406 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 SLC3A2P08195 630 aaKnown RBP7.95□□□□□ -1.14
NEDD9-202ENST00000379446 PDE6BP35913 854 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 MCM10Q7L590 875 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 NFATC2IPQ8NCF5 419 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 SCLT1Q96NL6 688 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 NCLP19338 710 aaKnown RBP7.94□□□□□ -1.14
NEDD9-202ENST00000379446 DPP8Q6V1X1 898 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-202ENST00000379446 C14orf93Q9H972 538 aaKnown RBP7.94□□□□□ -1.14
NEDD9-202ENST00000379446 PRKAG2Q9UGJ0 569 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 PARD3Q8TEW0 1356 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 PCDH11XQ9BZA7 1347 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 PCDH11YQ9BZA8 1340 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 ATP5J2-PTCD1G3V325 749 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 USP5P45974 858 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 BECN1Q14457 450 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 NFXL1Q6ZNB6 911 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 BCORL1Q5H9F3 1711 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.94□□□□□ -1.14
NEDD9-202ENST00000379446 POLR3DP05423 398 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-202ENST00000379446 IFIT5Q13325 482 aaKnown RBP7.94□□□□□ -1.14
NEDD9-202ENST00000379446 SLC4A8Q2Y0W8 1093 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 DNAJC2Q99543 621 aaKnown RBP7.94□□□□□ -1.14
NEDD9-202ENST00000379446 MYD88Q99836 296 aa7.94□□□□□ -1.14
NEDD9-202ENST00000379446 ATF7IPQ6VMQ6 1270 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 ITSN2Q9NZM3 1697 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 MMP10P09238 476 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 EZH2Q15910 746 aaKnown RBP7.93□□□□□ -1.14
NEDD9-202ENST00000379446 CNKSR1Q969H4 720 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 RBM17Q96I25 401 aaKnown RBP7.93□□□□□ -1.14
NEDD9-202ENST00000379446 MKRN3Q13064 507 aaKnown RBP7.93□□□□□ -1.14
NEDD9-202ENST00000379446 ANKRD18AQ8IVF6 992 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 SMCR8Q8TEV9 937 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-202ENST00000379446 PIM2Q9P1W9 311 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 TTC21AQ8NDW8 1320 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 ADGRL2O95490 1459 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 SLC4A2P04920 1241 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 SNRPA1P09661 255 aaKnown RBP7.93□□□□□ -1.14
NEDD9-202ENST00000379446 TNNI2P48788 182 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 PDE4CQ08493 712 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 TXNRD1Q16881 649 aa7.93□□□□□ -1.14
NEDD9-202ENST00000379446 FKBP4Q02790 459 aaKnown RBP eCLIP7.92□□□□□ -1.14
NEDD9-202ENST00000379446 DCTN1Q14203 1278 aa7.92□□□□□ -1.14
NEDD9-202ENST00000379446 PLS1Q14651 629 aa7.92□□□□□ -1.14
NEDD9-202ENST00000379446 DUSP27Q5VZP5 1158 aa7.92□□□□□ -1.14
NEDD9-202ENST00000379446 CABP5Q9NP86 173 aa7.92□□□□□ -1.14
NEDD9-202ENST00000379446 SYCP2Q9BX26 1530 aa7.92□□□□□ -1.14
NEDD9-202ENST00000379446 PTPRMP28827 1452 aa7.92□□□□□ -1.14
NEDD9-202ENST00000379446 SLF2Q8IX21 1173 aa7.92□□□□□ -1.14
NEDD9-202ENST00000379446 NOD1Q9Y239 953 aa7.92□□□□□ -1.14
NEDD9-202ENST00000379446 KDM5CP41229 1560 aa7.92□□□□□ -1.14
NEDD9-202ENST00000379446 ANKRD18BA2A2Z9 1011 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 GOLGA6L4A6NEF3 574 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 IDH1O75874 414 aaKnown RBP7.91□□□□□ -1.14
NEDD9-202ENST00000379446 SUPT20HQ8NEM7 779 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 KIAA0232Q92628 1395 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 MBD5Q9P267 1494 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 SKIV2LQ15477 1246 aaKnown RBP7.91□□□□□ -1.14
NEDD9-202ENST00000379446 API5Q9BZZ5 524 aaKnown RBP7.91□□□□□ -1.14
NEDD9-202ENST00000379446 DIAPH3Q9NSV4 1193 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 IQSEC3Q9UPP2 1182 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-202ENST00000379446 IVNS1ABPQ9Y6Y0 642 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 TAF7Q15545 349 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-202ENST00000379446 CCDC152Q4G0S7 254 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 ANP32BQ92688 251 aaKnown RBP7.91□□□□□ -1.14
NEDD9-202ENST00000379446 TMEM106CQ9BVX2 250 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 ALDH1B1P30837 517 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 UTP14AQ9BVJ6 771 aaKnown RBP7.91□□□□□ -1.14
NEDD9-202ENST00000379446 PLEKHH1Q9ULM0 1364 aa7.91□□□□□ -1.14
NEDD9-202ENST00000379446 CCDC85CA6NKD9 419 aa7.9□□□□□ -1.14
NEDD9-202ENST00000379446 SURF6O75683 361 aaKnown RBP7.9□□□□□ -1.14
NEDD9-202ENST00000379446 PPM1FP49593 454 aaPredicted RBP7.9□□□□□ -1.14
NEDD9-202ENST00000379446 SLFN5Q08AF3 891 aa7.9□□□□□ -1.14
NEDD9-202ENST00000379446 RUNDC1Q96C34 613 aa7.9□□□□□ -1.14
NEDD9-202ENST00000379446 CPLX2Q6PUV4 134 aaKnown RBP7.9□□□□□ -1.14
NEDD9-202ENST00000379446 LDHAL6AQ6ZMR3 332 aa7.9□□□□□ -1.14
NEDD9-202ENST00000379446 SRCIN1Q9C0H9 1055 aa7.9□□□□□ -1.14
NEDD9-202ENST00000379446 ARHGEF12Q9NZN5 1544 aa7.9□□□□□ -1.14
NEDD9-202ENST00000379446 L1TD1Q5T7N2 865 aaKnown RBP7.9□□□□□ -1.15
NEDD9-202ENST00000379446 SOGA3Q5TF21 947 aa7.9□□□□□ -1.15
NEDD9-202ENST00000379446 JARID2Q92833 1246 aaPredicted RBP7.9□□□□□ -1.15
NEDD9-202ENST00000379446 CSADQ9Y600 493 aa7.9□□□□□ -1.15
NEDD9-202ENST00000379446 SCAF11Q99590 1463 aaKnown RBP7.9□□□□□ -1.15
NEDD9-202ENST00000379446 GOLGA6L3A6NEY3 463 aa7.9□□□□□ -1.15
NEDD9-202ENST00000379446 CNGA1P29973 690 aa7.9□□□□□ -1.15
NEDD9-202ENST00000379446 DCAF5Q96JK2 942 aa7.9□□□□□ -1.15
NEDD9-202ENST00000379446 JAG2Q9Y219 1238 aa7.9□□□□□ -1.15
NEDD9-202ENST00000379446 ANXA1P04083 346 aa7.89□□□□□ -1.15
NEDD9-202ENST00000379446 MAP3K9P80192 1104 aa7.89□□□□□ -1.15
NEDD9-202ENST00000379446 RALYLQ86SE5 291 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms