RNA–Protein interactions for RNA: ENST00000379056.5

TPT1-203, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-203ENST00000379056 ATG3Q9NT62 314 aa16.57■□□□□ 0.24
TPT1-203ENST00000379056 PKD1L3Q7Z443 1732 aa16.56■□□□□ 0.24
TPT1-203ENST00000379056 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
TPT1-203ENST00000379056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.56■□□□□ 0.24
TPT1-203ENST00000379056 CHD4Q14839 1912 aa16.55■□□□□ 0.24
TPT1-203ENST00000379056 PLEKHG2Q9H7P9 1386 aa16.55■□□□□ 0.24
TPT1-203ENST00000379056 SSFA2P28290 1259 aa16.55■□□□□ 0.24
TPT1-203ENST00000379056 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
TPT1-203ENST00000379056 GNPATO15228 680 aa16.54■□□□□ 0.24
TPT1-203ENST00000379056 GRIN3BO60391 1043 aa16.54■□□□□ 0.24
TPT1-203ENST00000379056 IL13P35225 146 aa16.54■□□□□ 0.24
TPT1-203ENST00000379056 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
TPT1-203ENST00000379056 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
TPT1-203ENST00000379056 TUBGCP6Q96RT7 1819 aa16.54■□□□□ 0.24
TPT1-203ENST00000379056 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
TPT1-203ENST00000379056 TRAPPC3LQ5T215 181 aa16.53■□□□□ 0.24
TPT1-203ENST00000379056 AEBP1Q8IUX7 1158 aa16.53■□□□□ 0.24
TPT1-203ENST00000379056 NLGN2Q8NFZ4 835 aa16.53■□□□□ 0.24
TPT1-203ENST00000379056 RTCBQ9Y3I0 505 aaKnown RBP16.53■□□□□ 0.24
TPT1-203ENST00000379056 CD2APQ9Y5K6 639 aa16.53■□□□□ 0.24
TPT1-203ENST00000379056 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
TPT1-203ENST00000379056 C5P01031 1676 aa16.53■□□□□ 0.24
TPT1-203ENST00000379056 ITPK1Q13572 414 aa16.52■□□□□ 0.24
TPT1-203ENST00000379056 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
TPT1-203ENST00000379056 NFATC2IPQ8NCF5 419 aa16.52■□□□□ 0.24
TPT1-203ENST00000379056 PER1O15534 1290 aaPredicted RBP16.51■□□□□ 0.23
TPT1-203ENST00000379056 ZNF784Q8NCA9 323 aaPredicted RBP16.51■□□□□ 0.23
TPT1-203ENST00000379056 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
TPT1-203ENST00000379056 PTCD1O75127 700 aaKnown RBP16.5■□□□□ 0.23
TPT1-203ENST00000379056 RC3H1Q5TC82 1133 aaKnown RBP16.5■□□□□ 0.23
TPT1-203ENST00000379056 TOGARAM1Q9Y4F4 1720 aa16.5■□□□□ 0.23
TPT1-203ENST00000379056 HMOX1P09601 288 aa16.49■□□□□ 0.23
TPT1-203ENST00000379056 C4BP0C0L5 1744 aa16.49■□□□□ 0.23
TPT1-203ENST00000379056 NLGN1Q8N2Q7 840 aa16.49■□□□□ 0.23
TPT1-203ENST00000379056 RFC4P35249 363 aa16.48■□□□□ 0.23
TPT1-203ENST00000379056 AKAP4Q5JQC9 854 aa16.48■□□□□ 0.23
TPT1-203ENST00000379056 AMIGO3Q86WK7 504 aa16.48■□□□□ 0.23
TPT1-203ENST00000379056 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
TPT1-203ENST00000379056 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
TPT1-203ENST00000379056 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.23
TPT1-203ENST00000379056 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
TPT1-203ENST00000379056 YBX3P16989 372 aaKnown RBP eCLIP16.45■□□□□ 0.222e-34■■□□□ 12.7
TPT1-203ENST00000379056 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
TPT1-203ENST00000379056 KDRP35968 1356 aa16.45■□□□□ 0.22
TPT1-203ENST00000379056 UBR3Q6ZT12 1888 aa16.45■□□□□ 0.22
TPT1-203ENST00000379056 MMP10P09238 476 aa16.44■□□□□ 0.22
TPT1-203ENST00000379056 LGR6Q9HBX8 967 aa16.44■□□□□ 0.22
TPT1-203ENST00000379056 SLC52A2Q9HAB3 445 aa16.43■□□□□ 0.22
TPT1-203ENST00000379056 KDM6AO15550 1401 aaPredicted RBP16.43■□□□□ 0.22
TPT1-203ENST00000379056 CNTNAP4Q9C0A0 1308 aa16.43■□□□□ 0.22
TPT1-203ENST00000379056 RNMTO43148 476 aaKnown RBP16.42■□□□□ 0.22
TPT1-203ENST00000379056 MTHFSDQ2M296 383 aaKnown RBP16.42■□□□□ 0.22
TPT1-203ENST00000379056 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
TPT1-203ENST00000379056 PARP3Q9Y6F1 533 aa16.42■□□□□ 0.22
TPT1-203ENST00000379056 CRKLP46109 303 aaKnown RBP16.41■□□□□ 0.22
TPT1-203ENST00000379056 UTRNP46939 3433 aa16.41■□□□□ 0.22
TPT1-203ENST00000379056 NPC1L1Q9UHC9 1359 aa16.4■□□□□ 0.22
TPT1-203ENST00000379056 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
TPT1-203ENST00000379056 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
TPT1-203ENST00000379056 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
TPT1-203ENST00000379056 GYS1P13807 737 aa16.39■□□□□ 0.21
TPT1-203ENST00000379056 TGFB2P61812 414 aa16.39■□□□□ 0.21
TPT1-203ENST00000379056 ZPR1O75312 459 aa16.38■□□□□ 0.21
TPT1-203ENST00000379056 TEFQ10587 303 aa16.38■□□□□ 0.21
TPT1-203ENST00000379056 SLC39A6Q13433 755 aa16.38■□□□□ 0.21
TPT1-203ENST00000379056 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
TPT1-203ENST00000379056 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
TPT1-203ENST00000379056 DNAJC10Q8IXB1 793 aa16.37■□□□□ 0.21
TPT1-203ENST00000379056 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
TPT1-203ENST00000379056 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
TPT1-203ENST00000379056 GIGYF1O75420 1035 aaPredicted RBP16.36■□□□□ 0.21
TPT1-203ENST00000379056 C1QTNF8P60827 252 aa16.36■□□□□ 0.21
TPT1-203ENST00000379056 INTS5Q6P9B9 1019 aaKnown RBP16.36■□□□□ 0.21
TPT1-203ENST00000379056 SCN11AQ9UI33 1791 aa16.36■□□□□ 0.21
TPT1-203ENST00000379056 A0A0G2JLW4 131 aa16.35■□□□□ 0.21
TPT1-203ENST00000379056 ZNF831Q5JPB2 1677 aa16.34■□□□□ 0.21
TPT1-203ENST00000379056 STARD3NLO95772 234 aa16.34■□□□□ 0.21
TPT1-203ENST00000379056 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
TPT1-203ENST00000379056 SRP68Q9UHB9 627 aaKnown RBP16.34■□□□□ 0.21
TPT1-203ENST00000379056 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
TPT1-203ENST00000379056 CYP19A1P11511 503 aaPredicted RBP16.33■□□□□ 0.2
TPT1-203ENST00000379056 NPM2Q86SE8 214 aaKnown RBP16.33■□□□□ 0.2
TPT1-203ENST00000379056 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.2
TPT1-203ENST00000379056 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
TPT1-203ENST00000379056 FCHSD2O94868 740 aa16.32■□□□□ 0.2
TPT1-203ENST00000379056 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
TPT1-203ENST00000379056 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.2
TPT1-203ENST00000379056 FKBP8Q14318 412 aa16.32■□□□□ 0.2
TPT1-203ENST00000379056 ARHGAP27Q6ZUM4 889 aa16.32■□□□□ 0.2
TPT1-203ENST00000379056 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
TPT1-203ENST00000379056 GPBP1L1Q9HC44 474 aaPredicted RBP16.32■□□□□ 0.2
TPT1-203ENST00000379056 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
TPT1-203ENST00000379056 DPEP1P16444 411 aa16.31■□□□□ 0.2
TPT1-203ENST00000379056 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
TPT1-203ENST00000379056 PRKAR2BP31323 418 aa16.31■□□□□ 0.2
TPT1-203ENST00000379056 USPL1Q5W0Q7 1092 aa16.31■□□□□ 0.2
TPT1-203ENST00000379056 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
TPT1-203ENST00000379056 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
TPT1-203ENST00000379056 NEFMP07197 916 aa16.3■□□□□ 0.2
TPT1-203ENST00000379056 PPP2R1AP30153 589 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms