RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PDE1AP54750 535 aa22.37■■□□□ 1.17
TDP2-202ENST00000378198 NLRP6P59044 892 aa22.37■■□□□ 1.17
TDP2-202ENST00000378198 NUCB2P80303 420 aa22.37■■□□□ 1.17
TDP2-202ENST00000378198 BABAM1Q9NWV8 329 aa22.37■■□□□ 1.17
TDP2-202ENST00000378198 FER1L4A9Z1Z3 1794 aa22.36■■□□□ 1.17
TDP2-202ENST00000378198 HOXC9P31274 260 aa22.35■■□□□ 1.17
TDP2-202ENST00000378198 NWD1Q149M9 1564 aa22.35■■□□□ 1.17
TDP2-202ENST00000378198 CWC22Q9HCG8 908 aaKnown RBP22.35■■□□□ 1.17
TDP2-202ENST00000378198 FLIIQ13045 1269 aa22.35■■□□□ 1.17
TDP2-202ENST00000378198 THEMISQ8N1K5 641 aaPredicted RBP22.35■■□□□ 1.17
TDP2-202ENST00000378198 BAG4O95429 457 aaKnown RBP22.34■■□□□ 1.17
TDP2-202ENST00000378198 FKBP5Q13451 457 aaPredicted RBP22.34■■□□□ 1.17
TDP2-202ENST00000378198 RRAGDQ9NQL2 400 aaPredicted RBP22.34■■□□□ 1.17
TDP2-202ENST00000378198 PXDNLA1KZ92 1463 aa22.33■■□□□ 1.17
TDP2-202ENST00000378198 MAP3K5Q99683 1374 aa22.33■■□□□ 1.17
TDP2-202ENST00000378198 ATP8B2P98198 1209 aa22.32■■□□□ 1.16
TDP2-202ENST00000378198 SALL3Q9BXA9 1300 aa22.32■■□□□ 1.16
TDP2-202ENST00000378198 LRRCC1Q9C099 1032 aa22.32■■□□□ 1.16
TDP2-202ENST00000378198 EXOC6BQ9Y2D4 811 aa22.31■■□□□ 1.16
TDP2-202ENST00000378198 CYP2E1P05181 493 aaPredicted RBP22.3■■□□□ 1.16
TDP2-202ENST00000378198 TAF7Q15545 349 aaPredicted RBP22.3■■□□□ 1.16
TDP2-202ENST00000378198 KLHL40Q2TBA0 621 aa22.3■■□□□ 1.16
TDP2-202ENST00000378198 LTN1O94822 1766 aa22.3■■□□□ 1.16
TDP2-202ENST00000378198 IL17REQ8NFR9 667 aa22.29■■□□□ 1.16
TDP2-202ENST00000378198 IBTKQ9P2D0 1353 aaPredicted RBP22.29■■□□□ 1.16
TDP2-202ENST00000378198 GAS2L3Q86XJ1 694 aa22.29■■□□□ 1.16
TDP2-202ENST00000378198 MX1P20591 662 aa22.27■■□□□ 1.16
TDP2-202ENST00000378198 ABTB2Q8N961 1025 aa22.27■■□□□ 1.16
TDP2-202ENST00000378198 SRCIN1Q9C0H9 1055 aa22.27■■□□□ 1.16
TDP2-202ENST00000378198 DDX49Q9Y6V7 483 aaKnown RBP22.27■■□□□ 1.16
TDP2-202ENST00000378198 PNMA6EA0A0J9YXQ4 647 aa22.26■■□□□ 1.15
TDP2-202ENST00000378198 NUTM2GQ5VZR2 741 aa22.26■■□□□ 1.15
TDP2-202ENST00000378198 ESYT1Q9BSJ8 1104 aa22.26■■□□□ 1.15
TDP2-202ENST00000378198 STAP2Q9UGK3 403 aa22.26■■□□□ 1.15
TDP2-202ENST00000378198 KCNA6P17658 529 aa22.25■■□□□ 1.15
TDP2-202ENST00000378198 NECTIN2Q92692 538 aa22.25■■□□□ 1.15
TDP2-202ENST00000378198 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.25■■□□□ 1.15
TDP2-202ENST00000378198 AOX1Q06278 1338 aa22.24■■□□□ 1.15
TDP2-202ENST00000378198 MCCP23508 829 aa22.24■■□□□ 1.15
TDP2-202ENST00000378198 MCM2P49736 904 aa22.24■■□□□ 1.15
TDP2-202ENST00000378198 LRRFIP2Q9Y608 721 aaKnown RBP22.24■■□□□ 1.15
TDP2-202ENST00000378198 MCTP1Q6DN14 999 aa22.23■■□□□ 1.15
TDP2-202ENST00000378198 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
TDP2-202ENST00000378198 CLCN1P35523 988 aa22.22■■□□□ 1.15
TDP2-202ENST00000378198 LTV1Q96GA3 475 aaPredicted RBP22.22■■□□□ 1.15
TDP2-202ENST00000378198 USP44Q9H0E7 712 aa22.22■■□□□ 1.15
TDP2-202ENST00000378198 UBTFL1P0CB47 393 aaPredicted RBP22.22■■□□□ 1.15
TDP2-202ENST00000378198 HDGFL1Q5TGJ6 251 aa22.22■■□□□ 1.15
TDP2-202ENST00000378198 KDM3BQ7LBC6 1761 aa22.21■■□□□ 1.15
TDP2-202ENST00000378198 CHMLP26374 656 aa22.21■■□□□ 1.15
TDP2-202ENST00000378198 ANAPC15P60006 121 aa22.21■■□□□ 1.15
TDP2-202ENST00000378198 ZGPATQ8N5A5 531 aaKnown RBP22.21■■□□□ 1.15
TDP2-202ENST00000378198 SSH3Q8TE77 659 aa22.21■■□□□ 1.15
TDP2-202ENST00000378198 LMBRD1Q9NUN5 540 aa22.21■■□□□ 1.15
TDP2-202ENST00000378198 CEMIPQ8WUJ3 1361 aa22.2■■□□□ 1.15
TDP2-202ENST00000378198 CHD2O14647 1828 aaKnown RBP22.2■■□□□ 1.14
TDP2-202ENST00000378198 NEK4P51957 841 aa22.2■■□□□ 1.14
TDP2-202ENST00000378198 TSHZ3Q63HK5 1081 aa22.2■■□□□ 1.14
TDP2-202ENST00000378198 CHMP4AQ9BY43 222 aa22.2■■□□□ 1.14
TDP2-202ENST00000378198 MED1Q15648 1581 aaPredicted RBP22.2■■□□□ 1.14
TDP2-202ENST00000378198 TRIM6-TRIM34B2RNG4 842 aa22.19■■□□□ 1.14
TDP2-202ENST00000378198 PKP1Q13835 747 aa22.19■■□□□ 1.14
TDP2-202ENST00000378198 RILPL2Q969X0 211 aa22.19■■□□□ 1.14
TDP2-202ENST00000378198 EPB41L2O43491 1005 aaKnown RBP22.19■■□□□ 1.14
TDP2-202ENST00000378198 RAB11FIP3O75154 756 aa22.19■■□□□ 1.14
TDP2-202ENST00000378198 IP6K1Q92551 441 aa22.19■■□□□ 1.14
TDP2-202ENST00000378198 ZNF445P59923 1031 aa22.18■■□□□ 1.14
TDP2-202ENST00000378198 IL17RAQ96F46 866 aa22.18■■□□□ 1.14
TDP2-202ENST00000378198 PHF8Q9UPP1 1060 aa22.18■■□□□ 1.14
TDP2-202ENST00000378198 SETD1BQ9UPS6 1966 aaKnown RBP22.18■■□□□ 1.14
TDP2-202ENST00000378198 HOXB7P09629 217 aa22.18■■□□□ 1.14
TDP2-202ENST00000378198 TRIM44Q96DX7 344 aaPredicted RBP22.18■■□□□ 1.14
TDP2-202ENST00000378198 LMO7Q8WWI1 1683 aa22.17■■□□□ 1.14
TDP2-202ENST00000378198 C14orf37Q86TY3 774 aa22.17■■□□□ 1.14
TDP2-202ENST00000378198 TMX3Q96JJ7 454 aa22.17■■□□□ 1.14
TDP2-202ENST00000378198 PHAXQ9H814 394 aaKnown RBP22.17■■□□□ 1.14
TDP2-202ENST00000378198 ZDHHC9Q9Y397 364 aa22.17■■□□□ 1.14
TDP2-202ENST00000378198 NFAT5O94916 1531 aa22.17■■□□□ 1.14
TDP2-202ENST00000378198 USHBP1Q8N6Y0 703 aa22.16■■□□□ 1.14
TDP2-202ENST00000378198 PHRF1Q9P1Y6 1649 aaKnown RBP22.16■■□□□ 1.14
TDP2-202ENST00000378198 POLA2Q14181 598 aa22.16■■□□□ 1.14
TDP2-202ENST00000378198 ANO2Q9NQ90 1003 aa22.16■■□□□ 1.14
TDP2-202ENST00000378198 RGPD2P0DJD1 1756 aa22.15■■□□□ 1.14
TDP2-202ENST00000378198 CCDC173Q0VFZ6 552 aa22.15■■□□□ 1.14
TDP2-202ENST00000378198 CUL4AQ13619 759 aa22.15■■□□□ 1.14
TDP2-202ENST00000378198 ESPNB1AK53 854 aa22.15■■□□□ 1.14
TDP2-202ENST00000378198 EIF4A1P60842 406 aaKnown RBP22.15■■□□□ 1.14
TDP2-202ENST00000378198 NASPP49321 788 aaPredicted RBP22.14■■□□□ 1.13
TDP2-202ENST00000378198 NCLP19338 710 aaKnown RBP22.13■■□□□ 1.13
TDP2-202ENST00000378198 PPP1R42Q7Z4L9 355 aa22.13■■□□□ 1.13
TDP2-202ENST00000378198 ANP32BQ92688 251 aaKnown RBP22.13■■□□□ 1.13
TDP2-202ENST00000378198 INTS4Q96HW7 963 aaKnown RBP22.13■■□□□ 1.13
TDP2-202ENST00000378198 SURF6O75683 361 aaKnown RBP22.13■■□□□ 1.13
TDP2-202ENST00000378198 CAVIN1Q6NZI2 390 aaKnown RBP22.13■■□□□ 1.13
TDP2-202ENST00000378198 PPP1R9BQ96SB3 815 aa22.13■■□□□ 1.13
TDP2-202ENST00000378198 PALD1Q9ULE6 856 aa22.13■■□□□ 1.13
TDP2-202ENST00000378198 PRPF40AO75400 957 aaKnown RBP22.12■■□□□ 1.13
TDP2-202ENST00000378198 ZSCAN23Q3MJ62 389 aa22.12■■□□□ 1.13
TDP2-202ENST00000378198 NBPF6Q5VWK0 638 aa22.12■■□□□ 1.13
TDP2-202ENST00000378198 UNC5CLQ8IV45 518 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms