RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SURF6O75683 361 aaKnown RBP10.06□□□□□ -0.8
VPS36-201ENST00000378060 LTBP4Q8N2S1 1624 aa10.06□□□□□ -0.8
VPS36-201ENST00000378060 PES1O00541 588 aaKnown RBP10.06□□□□□ -0.8
VPS36-201ENST00000378060 CCT4P50991 539 aaKnown RBP10.06□□□□□ -0.8
VPS36-201ENST00000378060 WDR33Q9C0J8 1336 aaKnown RBP10.06□□□□□ -0.8
VPS36-201ENST00000378060 SIRT1Q96EB6 747 aa10.06□□□□□ -0.8
VPS36-201ENST00000378060 PDIA4P13667 645 aaKnown RBP10.06□□□□□ -0.8
VPS36-201ENST00000378060 ESCO1Q5FWF5 840 aa10.06□□□□□ -0.8
VPS36-201ENST00000378060 CCDC47Q96A33 483 aaKnown RBP10.06□□□□□ -0.8
VPS36-201ENST00000378060 CD163L1Q9NR16 1453 aa10.05□□□□□ -0.8
VPS36-201ENST00000378060 A0A1W2PP64 1363 aa10.05□□□□□ -0.8
VPS36-201ENST00000378060 DHX8Q14562 1220 aaKnown RBP10.05□□□□□ -0.8
VPS36-201ENST00000378060 RPAP2Q8IXW5 612 aaPredicted RBP10.05□□□□□ -0.8
VPS36-201ENST00000378060 SDF4Q9BRK5 362 aa10.05□□□□□ -0.8
VPS36-201ENST00000378060 SRCIN1Q9C0H9 1055 aa10.05□□□□□ -0.8
VPS36-201ENST00000378060 FCHSD2O94868 740 aa10.05□□□□□ -0.8
VPS36-201ENST00000378060 CLSTN1O94985 981 aa10.05□□□□□ -0.8
VPS36-201ENST00000378060 SAFBQ15424 915 aaKnown RBP eCLIP10.05□□□□□ -0.8
VPS36-201ENST00000378060 ERC1Q8IUD2 1116 aa10.05□□□□□ -0.8
VPS36-201ENST00000378060 MNS1Q8NEH6 495 aa10.05□□□□□ -0.8
VPS36-201ENST00000378060 GTF2E1P29083 439 aaPredicted RBP10.04□□□□□ -0.8
VPS36-201ENST00000378060 CCDC9Q9Y3X0 531 aaKnown RBP10.04□□□□□ -0.8
VPS36-201ENST00000378060 MARCH6O60337 910 aa10.04□□□□□ -0.8
VPS36-201ENST00000378060 CDC42BPGQ6DT37 1551 aa10.04□□□□□ -0.8
VPS36-201ENST00000378060 RALYLQ86SE5 291 aaKnown RBP10.04□□□□□ -0.8
VPS36-201ENST00000378060 ZNF692Q9BU19 519 aaPredicted RBP10.04□□□□□ -0.8
VPS36-201ENST00000378060 TRIM5Q9C035 493 aa10.04□□□□□ -0.8
VPS36-201ENST00000378060 TOPAZ1Q8N9V7 1692 aa10.04□□□□□ -0.8
VPS36-201ENST00000378060 TMX4Q9H1E5 349 aaPredicted RBP10.04□□□□□ -0.8
VPS36-201ENST00000378060 C19orf44Q9H6X5 657 aa10.04□□□□□ -0.8
VPS36-201ENST00000378060 ZRANB1Q9UGI0 708 aa10.04□□□□□ -0.8
VPS36-201ENST00000378060 ATAD2Q6PL18 1390 aa10.04□□□□□ -0.8
VPS36-201ENST00000378060 AEBP1Q8IUX7 1158 aa10.04□□□□□ -0.8
VPS36-201ENST00000378060 ATF3P18847 181 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 CEP89Q96ST8 783 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 APPP05067 770 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 FBLN1P23142 703 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 NUTM2GQ5VZR2 741 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 ACBD3Q9H3P7 528 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 ACEP12821 1306 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 MSH6P52701 1360 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 FOXO3O43524 673 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 KINO60870 393 aaKnown RBP10.03□□□□□ -0.8
VPS36-201ENST00000378060 SETQ01105 290 aaPredicted RBP10.03□□□□□ -0.8
VPS36-201ENST00000378060 PSME1Q06323 249 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 RIC3Q7Z5B4 369 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 NSD3Q9BZ95 1437 aa10.03□□□□□ -0.8
VPS36-201ENST00000378060 FSD1Q9BTV5 496 aa10.02□□□□□ -0.8
VPS36-201ENST00000378060 LRRCC1Q9C099 1032 aa10.02□□□□□ -0.8
VPS36-201ENST00000378060 C1orf115Q9H7X2 142 aa10.02□□□□□ -0.8
VPS36-201ENST00000378060 CCDC192P0DO97 292 aa10.02□□□□□ -0.81
VPS36-201ENST00000378060 ANKRD1Q15327 319 aa10.02□□□□□ -0.81
VPS36-201ENST00000378060 CCDC61Q9Y6R9 512 aa10.02□□□□□ -0.81
VPS36-201ENST00000378060 RRP9O43818 475 aaKnown RBP10.02□□□□□ -0.81
VPS36-201ENST00000378060 SLC4A2P04920 1241 aa10.02□□□□□ -0.81
VPS36-201ENST00000378060 TMPOP42166 694 aaKnown RBP10.02□□□□□ -0.81
VPS36-201ENST00000378060 RARSP54136 660 aaKnown RBP10.02□□□□□ -0.81
VPS36-201ENST00000378060 NLRP6P59044 892 aa10.02□□□□□ -0.81
VPS36-201ENST00000378060 RAPGEF4Q8WZA2 1011 aa10.02□□□□□ -0.81
VPS36-201ENST00000378060 MST1RQ04912 1400 aa10.02□□□□□ -0.81
VPS36-201ENST00000378060 PER1O15534 1290 aaPredicted RBP10.02□□□□□ -0.81
VPS36-201ENST00000378060 CCP110O43303 1012 aa10.02□□□□□ -0.81
VPS36-201ENST00000378060 PIP4K2BP78356 416 aa10.02□□□□□ -0.81
VPS36-201ENST00000378060 ITSN1Q15811 1721 aa10.01□□□□□ -0.81
VPS36-201ENST00000378060 ERICH2A1L162 156 aa10.01□□□□□ -0.81
VPS36-201ENST00000378060 FIBPO43427 364 aa10.01□□□□□ -0.81
VPS36-201ENST00000378060 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
VPS36-201ENST00000378060 ZSCAN30Q86W11 494 aa10.01□□□□□ -0.81
VPS36-201ENST00000378060 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
VPS36-201ENST00000378060 CYP46A1Q9Y6A2 500 aa10.01□□□□□ -0.81
VPS36-201ENST00000378060 C1orf167Q5SNV9 1468 aa10.01□□□□□ -0.81
VPS36-201ENST00000378060 ALDH1L2Q3SY69 923 aa10.01□□□□□ -0.81
VPS36-201ENST00000378060 NFXL1Q6ZNB6 911 aa10.01□□□□□ -0.81
VPS36-201ENST00000378060 DHX16O60231 1041 aaKnown RBP10□□□□□ -0.81
VPS36-201ENST00000378060 KRT85P78386 507 aa10□□□□□ -0.81
VPS36-201ENST00000378060 ZNF396Q96N95 335 aaPredicted RBP10□□□□□ -0.81
VPS36-201ENST00000378060 DUSP27Q5VZP5 1158 aa10□□□□□ -0.81
VPS36-201ENST00000378060 ZSCAN31Q96LW9 406 aaPredicted RBP10□□□□□ -0.81
VPS36-201ENST00000378060 NFE2L2Q16236 605 aa10□□□□□ -0.81
VPS36-201ENST00000378060 CCDC27Q2M243 656 aa10□□□□□ -0.81
VPS36-201ENST00000378060 HSP90B2PQ58FF3 399 aa10□□□□□ -0.81
VPS36-201ENST00000378060 NME9Q86XW9 330 aa10□□□□□ -0.81
VPS36-201ENST00000378060 AMOTL1Q8IY63 956 aa10□□□□□ -0.81
VPS36-201ENST00000378060 TMEM57Q8N5G2 664 aa10□□□□□ -0.81
VPS36-201ENST00000378060 NEUROD6Q96NK8 337 aa10□□□□□ -0.81
VPS36-201ENST00000378060 C20orf194Q5TEA3 1177 aa9.99□□□□□ -0.81
VPS36-201ENST00000378060 SULT6B1Q6IMI4 303 aa9.99□□□□□ -0.81
VPS36-201ENST00000378060 PHF8Q9UPP1 1060 aa9.99□□□□□ -0.81
VPS36-201ENST00000378060 AKAP12Q02952 1782 aa9.99□□□□□ -0.81
VPS36-201ENST00000378060 ANKRD36BQ8N2N9 1353 aa9.99□□□□□ -0.81
VPS36-201ENST00000378060 SLAIN2Q9P270 581 aa9.99□□□□□ -0.81
VPS36-201ENST00000378060 CCDC66A2RUB6 948 aa9.99□□□□□ -0.81
VPS36-201ENST00000378060 HDGFL1Q5TGJ6 251 aa9.99□□□□□ -0.81
VPS36-201ENST00000378060 PLEKHO1Q53GL0 409 aaPredicted RBP9.98□□□□□ -0.81
VPS36-201ENST00000378060 XBP1P17861 261 aa9.98□□□□□ -0.81
VPS36-201ENST00000378060 BRINP3Q76B58 766 aa9.98□□□□□ -0.81
VPS36-201ENST00000378060 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
VPS36-201ENST00000378060 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
VPS36-201ENST00000378060 PCMTD1Q96MG8 357 aaPredicted RBP9.98□□□□□ -0.81
VPS36-201ENST00000378060 MON2Q7Z3U7 1717 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms