RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 IL17REQ8NFR9 667 aa19.97■□□□□ 0.79
TRIM27-202ENST00000377199 NRKQ7Z2Y5 1582 aa19.97■□□□□ 0.79
TRIM27-202ENST00000377199 CCDC30Q5VVM6 783 aa19.96■□□□□ 0.79
TRIM27-202ENST00000377199 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
TRIM27-202ENST00000377199 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
TRIM27-202ENST00000377199 MAP4K4O95819 1239 aaPredicted RBP19.96■□□□□ 0.79
TRIM27-202ENST00000377199 ERC2O15083 957 aa19.95■□□□□ 0.78
TRIM27-202ENST00000377199 REC8O95072 547 aa19.95■□□□□ 0.78
TRIM27-202ENST00000377199 BAG4O95429 457 aaKnown RBP19.95■□□□□ 0.78
TRIM27-202ENST00000377199 ST18O60284 1047 aa19.95■□□□□ 0.78
TRIM27-202ENST00000377199 LRRCC1Q9C099 1032 aa19.95■□□□□ 0.78
TRIM27-202ENST00000377199 ANXA1P04083 346 aa19.94■□□□□ 0.78
TRIM27-202ENST00000377199 ANO2Q9NQ90 1003 aa19.94■□□□□ 0.78
TRIM27-202ENST00000377199 NEK4P51957 841 aa19.94■□□□□ 0.78
TRIM27-202ENST00000377199 HDGFL1Q5TGJ6 251 aa19.94■□□□□ 0.78
TRIM27-202ENST00000377199 FOXD4L6Q3SYB3 417 aaPredicted RBP19.93■□□□□ 0.78
TRIM27-202ENST00000377199 FOXD4L3Q6VB84 417 aaPredicted RBP19.93■□□□□ 0.78
TRIM27-202ENST00000377199 LMOD2Q6P5Q4 547 aa19.93■□□□□ 0.78
TRIM27-202ENST00000377199 NUTM1Q86Y26 1132 aa19.92■□□□□ 0.78
TRIM27-202ENST00000377199 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
TRIM27-202ENST00000377199 SSH2Q76I76 1423 aa19.92■□□□□ 0.78
TRIM27-202ENST00000377199 MX1P20591 662 aa19.92■□□□□ 0.78
TRIM27-202ENST00000377199 XPCQ01831 940 aaPredicted RBP19.92■□□□□ 0.78
TRIM27-202ENST00000377199 RGPD8O14715 1765 aaPredicted RBP19.91■□□□□ 0.78
TRIM27-202ENST00000377199 THEMISQ8N1K5 641 aaPredicted RBP19.91■□□□□ 0.78
TRIM27-202ENST00000377199 GNAI3P08754 354 aa19.91■□□□□ 0.78
TRIM27-202ENST00000377199 UBTFL1P0CB47 393 aaPredicted RBP19.91■□□□□ 0.78
TRIM27-202ENST00000377199 TPRNQ4KMQ1 711 aa19.91■□□□□ 0.78
TRIM27-202ENST00000377199 TAF7Q15545 349 aaPredicted RBP19.9■□□□□ 0.78
TRIM27-202ENST00000377199 CAVIN1Q6NZI2 390 aaKnown RBP19.9■□□□□ 0.78
TRIM27-202ENST00000377199 UNC5CLQ8IV45 518 aa19.9■□□□□ 0.78
TRIM27-202ENST00000377199 KIF13AQ9H1H9 1805 aa19.9■□□□□ 0.78
TRIM27-202ENST00000377199 SKOR2Q2VWA4 1001 aaPredicted RBP19.9■□□□□ 0.78
TRIM27-202ENST00000377199 KDRP35968 1356 aa19.9■□□□□ 0.78
TRIM27-202ENST00000377199 SETD1BQ9UPS6 1966 aaKnown RBP19.9■□□□□ 0.78
TRIM27-202ENST00000377199 UPF3BQ9BZI7 483 aaKnown RBP19.89■□□□□ 0.77
TRIM27-202ENST00000377199 LGR6Q9HBX8 967 aa19.89■□□□□ 0.77
TRIM27-202ENST00000377199 PALD1Q9ULE6 856 aa19.89■□□□□ 0.77
TRIM27-202ENST00000377199 PRPF40AO75400 957 aaKnown RBP19.88■□□□□ 0.77
TRIM27-202ENST00000377199 SURF6O75683 361 aaKnown RBP19.88■□□□□ 0.77
TRIM27-202ENST00000377199 TRIM44Q96DX7 344 aaPredicted RBP19.88■□□□□ 0.77
TRIM27-202ENST00000377199 KCNQ3O43525 872 aa19.88■□□□□ 0.77
TRIM27-202ENST00000377199 LRRC59Q96AG4 307 aaKnown RBP19.88■□□□□ 0.77
TRIM27-202ENST00000377199 USP44Q9H0E7 712 aa19.88■□□□□ 0.77
TRIM27-202ENST00000377199 MAP3K5Q99683 1374 aa19.87■□□□□ 0.77
TRIM27-202ENST00000377199 TOPAZ1Q8N9V7 1692 aa19.87■□□□□ 0.77
TRIM27-202ENST00000377199 ATP8B2P98198 1209 aa19.87■□□□□ 0.77
TRIM27-202ENST00000377199 DIP2AQ14689 1571 aa19.87■□□□□ 0.77
TRIM27-202ENST00000377199 NUCB2P80303 420 aa19.86■□□□□ 0.77
TRIM27-202ENST00000377199 ESCO1Q5FWF5 840 aa19.86■□□□□ 0.77
TRIM27-202ENST00000377199 ESYT1Q9BSJ8 1104 aa19.86■□□□□ 0.77
TRIM27-202ENST00000377199 RGPD1P0DJD0 1748 aa19.86■□□□□ 0.77
TRIM27-202ENST00000377199 NBPF6Q5VWK0 638 aa19.86■□□□□ 0.77
TRIM27-202ENST00000377199 NBPF4Q96M43 638 aa19.86■□□□□ 0.77
TRIM27-202ENST00000377199 MPRIPQ6WCQ1 1025 aa19.85■□□□□ 0.77
TRIM27-202ENST00000377199 CHPF2Q9P2E5 772 aa19.85■□□□□ 0.77
TRIM27-202ENST00000377199 RBM27Q9P2N5 1060 aaKnown RBP19.85■□□□□ 0.77
TRIM27-202ENST00000377199 PPP1R42Q7Z4L9 355 aa19.85■□□□□ 0.77
TRIM27-202ENST00000377199 SRGAP3O43295 1099 aa19.84■□□□□ 0.77
TRIM27-202ENST00000377199 NBPF7P0C2Y1 421 aaPredicted RBP19.84■□□□□ 0.77
TRIM27-202ENST00000377199 PSME1Q06323 249 aa19.84■□□□□ 0.77
TRIM27-202ENST00000377199 NAP1L5Q96NT1 182 aaPredicted RBP19.84■□□□□ 0.77
TRIM27-202ENST00000377199 LARP6Q9BRS8 491 aaKnown RBP19.84■□□□□ 0.77
TRIM27-202ENST00000377199 IL25Q9H293 177 aa19.84■□□□□ 0.77
TRIM27-202ENST00000377199 PHF8Q9UPP1 1060 aa19.84■□□□□ 0.77
TRIM27-202ENST00000377199 NALCNQ8IZF0 1738 aa19.84■□□□□ 0.77
TRIM27-202ENST00000377199 TMX3Q96JJ7 454 aa19.83■□□□□ 0.77
TRIM27-202ENST00000377199 PI4KAP2A4QPH2 592 aa19.83■□□□□ 0.77
TRIM27-202ENST00000377199 DTNBO60941 627 aa19.83■□□□□ 0.77
TRIM27-202ENST00000377199 CHMLP26374 656 aa19.83■□□□□ 0.77
TRIM27-202ENST00000377199 PI4KAP1Q8N8J0 262 aa19.83■□□□□ 0.77
TRIM27-202ENST00000377199 OSBPL3Q9H4L5 887 aa19.83■□□□□ 0.77
TRIM27-202ENST00000377199 KLHL40Q2TBA0 621 aa19.83■□□□□ 0.76
TRIM27-202ENST00000377199 PIK3C2AO00443 1686 aa19.82■□□□□ 0.76
TRIM27-202ENST00000377199 OS9Q13438 667 aaPredicted RBP19.82■□□□□ 0.76
TRIM27-202ENST00000377199 SRCIN1Q9C0H9 1055 aa19.82■□□□□ 0.76
TRIM27-202ENST00000377199 NASPP49321 788 aaPredicted RBP19.82■□□□□ 0.76
TRIM27-202ENST00000377199 TEFQ10587 303 aa19.82■□□□□ 0.76
TRIM27-202ENST00000377199 ZDHHC9Q9Y397 364 aa19.82■□□□□ 0.76
TRIM27-202ENST00000377199 MCCP23508 829 aa19.81■□□□□ 0.76
TRIM27-202ENST00000377199 ERBB4Q15303 1308 aa19.81■□□□□ 0.76
TRIM27-202ENST00000377199 IBTKQ9P2D0 1353 aaPredicted RBP19.81■□□□□ 0.76
TRIM27-202ENST00000377199 HTATSF1O43719 755 aaKnown RBP19.81■□□□□ 0.76
TRIM27-202ENST00000377199 PTMSP20962 102 aa19.81■□□□□ 0.76
TRIM27-202ENST00000377199 FMN2Q9NZ56 1722 aa19.81■□□□□ 0.76
TRIM27-202ENST00000377199 LMBRD1Q9NUN5 540 aa19.8■□□□□ 0.76
TRIM27-202ENST00000377199 TRHP20396 242 aaPredicted RBP19.8■□□□□ 0.76
TRIM27-202ENST00000377199 ZNF530Q6P9A1 599 aaPredicted RBP19.8■□□□□ 0.76
TRIM27-202ENST00000377199 PRKCSHP14314 528 aaPredicted RBP19.79■□□□□ 0.76
TRIM27-202ENST00000377199 CWC22Q9HCG8 908 aaKnown RBP19.79■□□□□ 0.76
TRIM27-202ENST00000377199 SALL3Q9BXA9 1300 aa19.79■□□□□ 0.76
TRIM27-202ENST00000377199 BTBD11A6QL63 1104 aa19.78■□□□□ 0.76
TRIM27-202ENST00000377199 SOS1Q07889 1333 aaPredicted RBP19.78■□□□□ 0.76
TRIM27-202ENST00000377199 ESPNB1AK53 854 aa19.78■□□□□ 0.76
TRIM27-202ENST00000377199 CYP2E1P05181 493 aaPredicted RBP19.78■□□□□ 0.76
TRIM27-202ENST00000377199 ZSCAN23Q3MJ62 389 aa19.78■□□□□ 0.76
TRIM27-202ENST00000377199 ANP32BQ92688 251 aaKnown RBP19.77■□□□□ 0.76
TRIM27-202ENST00000377199 NSFL1CQ9UNZ2 370 aaKnown RBP19.77■□□□□ 0.76
TRIM27-202ENST00000377199 PRAMEF22A3QJZ6 481 aa19.77■□□□□ 0.76
TRIM27-202ENST00000377199 RHPN1Q8TCX5 695 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms