RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 IFT57Q9NWB7 429 aa23.24■■□□□ 1.31
HLA-A-203ENST00000376809 GNAI1P63096 354 aa23.23■■□□□ 1.31
HLA-A-203ENST00000376809 TAF7Q15545 349 aaPredicted RBP23.23■■□□□ 1.31
HLA-A-203ENST00000376809 NFATC2IPQ8NCF5 419 aa23.23■■□□□ 1.31
HLA-A-203ENST00000376809 CFAP44Q96MT7 982 aa23.23■■□□□ 1.31
HLA-A-203ENST00000376809 MIS18AQ9NYP9 233 aa23.23■■□□□ 1.31
HLA-A-203ENST00000376809 ERVV-2B6SEH9 535 aa23.22■■□□□ 1.31
HLA-A-203ENST00000376809 TSR2Q969E8 191 aaKnown RBP23.22■■□□□ 1.31
HLA-A-203ENST00000376809 ACSBG1Q96GR2 724 aa23.22■■□□□ 1.31
HLA-A-203ENST00000376809 ZNF853P0CG23 659 aa23.22■■□□□ 1.31
HLA-A-203ENST00000376809 SBF2Q86WG5 1849 aa23.21■■□□□ 1.31
HLA-A-203ENST00000376809 KDM3BQ7LBC6 1761 aa23.21■■□□□ 1.31
HLA-A-203ENST00000376809 SYTL4Q96C24 671 aaPredicted RBP23.21■■□□□ 1.31
HLA-A-203ENST00000376809 MYH16Q9H6N6 1097 aa23.21■■□□□ 1.31
HLA-A-203ENST00000376809 MBIPQ9NS73 344 aa23.2■■□□□ 1.3
HLA-A-203ENST00000376809 TSPYL4Q9UJ04 414 aa23.2■■□□□ 1.3
HLA-A-203ENST00000376809 FANCIQ9NVI1 1328 aa23.19■■□□□ 1.3
HLA-A-203ENST00000376809 BTBD11A6QL63 1104 aa23.19■■□□□ 1.3
HLA-A-203ENST00000376809 CHL1O00533 1208 aa23.19■■□□□ 1.3
HLA-A-203ENST00000376809 PRIM1P49642 420 aaKnown RBP23.19■■□□□ 1.3
HLA-A-203ENST00000376809 TMOD3Q9NYL9 352 aa23.19■■□□□ 1.3
HLA-A-203ENST00000376809 DUSP27Q5VZP5 1158 aa23.19■■□□□ 1.3
HLA-A-203ENST00000376809 TRMT2AQ8IZ69 625 aaKnown RBP23.18■■□□□ 1.3
HLA-A-203ENST00000376809 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
HLA-A-203ENST00000376809 PIGBQ92521 554 aa23.16■■□□□ 1.3
HLA-A-203ENST00000376809 BCL9O00512 1426 aa23.16■■□□□ 1.3
HLA-A-203ENST00000376809 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
HLA-A-203ENST00000376809 BABAM1Q9NWV8 329 aa23.15■■□□□ 1.3
HLA-A-203ENST00000376809 PAPPAQ13219 1627 aa23.15■■□□□ 1.3
HLA-A-203ENST00000376809 KCNQ2O43526 872 aa23.15■■□□□ 1.3
HLA-A-203ENST00000376809 KCNQ3O43525 872 aa23.14■■□□□ 1.29
HLA-A-203ENST00000376809 FAM196AQ6ZSG2 479 aa23.14■■□□□ 1.29
HLA-A-203ENST00000376809 BTAF1O14981 1849 aa23.13■■□□□ 1.29
HLA-A-203ENST00000376809 ZNF790Q6PG37 636 aa23.12■■□□□ 1.29
HLA-A-203ENST00000376809 EXOSC9Q06265 439 aaKnown RBP23.11■■□□□ 1.29
HLA-A-203ENST00000376809 UBR2Q8IWV8 1755 aa23.11■■□□□ 1.29
HLA-A-203ENST00000376809 EP400Q96L91 3159 aa23.11■■□□□ 1.29
HLA-A-203ENST00000376809 PTF1AQ7RTS3 328 aa23.11■■□□□ 1.29
HLA-A-203ENST00000376809 TTC5Q8N0Z6 440 aa23.11■■□□□ 1.29
HLA-A-203ENST00000376809 KRT24Q2M2I5 525 aa23.1■■□□□ 1.29
HLA-A-203ENST00000376809 ASAP1Q9ULH1 1129 aa23.1■■□□□ 1.29
HLA-A-203ENST00000376809 CENPBP07199 599 aaPredicted RBP23.08■■□□□ 1.29
HLA-A-203ENST00000376809 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
HLA-A-203ENST00000376809 ATG3Q9NT62 314 aa23.08■■□□□ 1.29
HLA-A-203ENST00000376809 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.28
HLA-A-203ENST00000376809 C8orf58Q8NAV2 365 aa23.08■■□□□ 1.28
HLA-A-203ENST00000376809 TSPYL6Q8N831 410 aa23.07■■□□□ 1.28
HLA-A-203ENST00000376809 KCPQ6ZWJ8 1503 aa23.06■■□□□ 1.28
HLA-A-203ENST00000376809 TRIM37O94972 964 aa23.06■■□□□ 1.28
HLA-A-203ENST00000376809 ZNF496Q96IT1 587 aaPredicted RBP23.06■■□□□ 1.28
HLA-A-203ENST00000376809 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
HLA-A-203ENST00000376809 C5P01031 1676 aa23.05■■□□□ 1.28
HLA-A-203ENST00000376809 TWISTNBQ3B726 338 aaPredicted RBP23.04■■□□□ 1.28
HLA-A-203ENST00000376809 FMNL2Q96PY5 1086 aa23.04■■□□□ 1.28
HLA-A-203ENST00000376809 BCL11BQ9C0K0 894 aaPredicted RBP23.04■■□□□ 1.28
HLA-A-203ENST00000376809 RBM42Q9BTD8 480 aaKnown RBP23.03■■□□□ 1.28
HLA-A-203ENST00000376809 PALLDQ8WX93 1383 aa23.02■■□□□ 1.28
HLA-A-203ENST00000376809 HEG1Q9ULI3 1381 aa23.02■■□□□ 1.28
HLA-A-203ENST00000376809 PRAMEF22A3QJZ6 481 aa23■■□□□ 1.27
HLA-A-203ENST00000376809 SMARCC1Q92922 1105 aaPredicted RBP23■■□□□ 1.27
HLA-A-203ENST00000376809 LAMB4A4D0S4 1761 aa23■■□□□ 1.27
HLA-A-203ENST00000376809 TNS1Q9HBL0 1735 aaKnown RBP23■■□□□ 1.27
HLA-A-203ENST00000376809 VAMP4O75379 141 aa23■■□□□ 1.27
HLA-A-203ENST00000376809 GIGYF1O75420 1035 aaPredicted RBP23■■□□□ 1.27
HLA-A-203ENST00000376809 LY75O60449 1722 aa22.99■■□□□ 1.27
HLA-A-203ENST00000376809 CT47B1P0C2W7 299 aaPredicted RBP22.98■■□□□ 1.27
HLA-A-203ENST00000376809 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
HLA-A-203ENST00000376809 CCDC125Q86Z20 511 aa22.97■■□□□ 1.27
HLA-A-203ENST00000376809 TJP1Q07157 1748 aa22.97■■□□□ 1.27
HLA-A-203ENST00000376809 EIF2S2P20042 333 aaKnown RBP22.97■■□□□ 1.27
HLA-A-203ENST00000376809 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
HLA-A-203ENST00000376809 SLC4A9Q96Q91 983 aa22.97■■□□□ 1.27
HLA-A-203ENST00000376809 RCAN3Q9UKA8 241 aa22.97■■□□□ 1.27
HLA-A-203ENST00000376809 LOC102724428A0A0B4J2F2 783 aa22.96■■□□□ 1.27
HLA-A-203ENST00000376809 TCERG1O14776 1098 aaKnown RBP22.96■■□□□ 1.27
HLA-A-203ENST00000376809 HOXB7P09629 217 aa22.96■■□□□ 1.27
HLA-A-203ENST00000376809 SIK1P57059 783 aa22.96■■□□□ 1.27
HLA-A-203ENST00000376809 SF3B2Q13435 895 aaKnown RBP22.96■■□□□ 1.27
HLA-A-203ENST00000376809 SOS1Q07889 1333 aaPredicted RBP22.95■■□□□ 1.26
HLA-A-203ENST00000376809 HDGFL1Q5TGJ6 251 aa22.95■■□□□ 1.26
HLA-A-203ENST00000376809 VSIG10Q8N0Z9 540 aa22.94■■□□□ 1.26
HLA-A-203ENST00000376809 BCL2L13Q9BXK5 485 aa22.94■■□□□ 1.26
HLA-A-203ENST00000376809 USP16Q9Y5T5 823 aa22.94■■□□□ 1.26
HLA-A-203ENST00000376809 ATP6V1AP38606 617 aa22.93■■□□□ 1.26
HLA-A-203ENST00000376809 RARSP54136 660 aaKnown RBP22.93■■□□□ 1.26
HLA-A-203ENST00000376809 DNAJC10Q8IXB1 793 aa22.93■■□□□ 1.26
HLA-A-203ENST00000376809 ZNF831Q5JPB2 1677 aa22.93■■□□□ 1.26
HLA-A-203ENST00000376809 APBA3O96018 575 aa22.93■■□□□ 1.26
HLA-A-203ENST00000376809 CACNA1FO60840 1977 aa22.93■■□□□ 1.26
HLA-A-203ENST00000376809 CICQ96RK0 1608 aaPredicted RBP22.92■■□□□ 1.26
HLA-A-203ENST00000376809 SSH1Q8WYL5 1049 aa22.92■■□□□ 1.26
HLA-A-203ENST00000376809 ZNF428Q96B54 188 aa22.92■■□□□ 1.26
HLA-A-203ENST00000376809 KCNQ4P56696 695 aa22.91■■□□□ 1.26
HLA-A-203ENST00000376809 CCDC30Q5VVM6 783 aa22.91■■□□□ 1.26
HLA-A-203ENST00000376809 SMC4Q9NTJ3 1288 aa22.91■■□□□ 1.26
HLA-A-203ENST00000376809 TAF1LQ8IZX4 1826 aa22.91■■□□□ 1.26
HLA-A-203ENST00000376809 BCAR3O75815 825 aa22.9■■□□□ 1.26
HLA-A-203ENST00000376809 COL5A3P25940 1745 aaPredicted RBP22.9■■□□□ 1.26
HLA-A-203ENST00000376809 ITPK1Q13572 414 aa22.9■■□□□ 1.26
HLA-A-203ENST00000376809 ALDH1L2Q3SY69 923 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms