RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 HDGFL1Q5TGJ6 251 aa15.96■□□□□ 0.15
CLCN6-206ENST00000376496 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
CLCN6-206ENST00000376496 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.15
CLCN6-206ENST00000376496 SPG7Q9UQ90 795 aa15.96■□□□□ 0.15
CLCN6-206ENST00000376496 COL5A2P05997 1499 aaPredicted RBP15.96■□□□□ 0.15
CLCN6-206ENST00000376496 KDM6AO15550 1401 aaPredicted RBP15.95■□□□□ 0.14
CLCN6-206ENST00000376496 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
CLCN6-206ENST00000376496 PHAXQ9H814 394 aaKnown RBP15.95■□□□□ 0.14
CLCN6-206ENST00000376496 PDZRN3Q9UPQ7 1066 aa15.95■□□□□ 0.14
CLCN6-206ENST00000376496 PDE4AP27815 886 aa15.95■□□□□ 0.14
CLCN6-206ENST00000376496 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
CLCN6-206ENST00000376496 BTG4Q9NY30 223 aa15.95■□□□□ 0.14
CLCN6-206ENST00000376496 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
CLCN6-206ENST00000376496 AAMPQ13685 434 aa15.94■□□□□ 0.14
CLCN6-206ENST00000376496 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
CLCN6-206ENST00000376496 FLIIQ13045 1269 aa15.93■□□□□ 0.14
CLCN6-206ENST00000376496 IFNL2Q8IZJ0 200 aa15.93■□□□□ 0.14
CLCN6-206ENST00000376496 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
CLCN6-206ENST00000376496 KDM3BQ7LBC6 1761 aa15.92■□□□□ 0.14
CLCN6-206ENST00000376496 BABAM1Q9NWV8 329 aa15.92■□□□□ 0.14
CLCN6-206ENST00000376496 ADAMTS2O95450 1211 aa15.92■□□□□ 0.14
CLCN6-206ENST00000376496 DDX54Q8TDD1 881 aaKnown RBP15.92■□□□□ 0.14
CLCN6-206ENST00000376496 MEIS3Q99687 375 aa15.92■□□□□ 0.14
CLCN6-206ENST00000376496 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
CLCN6-206ENST00000376496 PTPRCP08575 1304 aa15.91■□□□□ 0.14
CLCN6-206ENST00000376496 SIRT2Q8IXJ6 389 aa15.91■□□□□ 0.14
CLCN6-206ENST00000376496 SLC52A2Q9HAB3 445 aa15.91■□□□□ 0.14
CLCN6-206ENST00000376496 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
CLCN6-206ENST00000376496 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
CLCN6-206ENST00000376496 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
CLCN6-206ENST00000376496 ABCC6O95255 1503 aa15.9■□□□□ 0.14
CLCN6-206ENST00000376496 HDAC1Q13547 482 aaPredicted RBP15.9■□□□□ 0.14
CLCN6-206ENST00000376496 PROSER3Q2NL68 480 aa15.9■□□□□ 0.14
CLCN6-206ENST00000376496 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
CLCN6-206ENST00000376496 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
CLCN6-206ENST00000376496 BACH2Q9BYV9 841 aa15.89■□□□□ 0.13
CLCN6-206ENST00000376496 OVOS2A0A0G2JMS6 1433 aa15.89■□□□□ 0.13
CLCN6-206ENST00000376496 GIGYF1O75420 1035 aaPredicted RBP15.89■□□□□ 0.13
CLCN6-206ENST00000376496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.89■□□□□ 0.133e-9■■□□□ 12.1
CLCN6-206ENST00000376496 IL2RBP14784 551 aa15.88■□□□□ 0.13
CLCN6-206ENST00000376496 CARD10Q9BWT7 1032 aa15.88■□□□□ 0.13
CLCN6-206ENST00000376496 PIP4K2AP48426 406 aaPredicted RBP15.88■□□□□ 0.13
CLCN6-206ENST00000376496 ZNF790Q6PG37 636 aa15.88■□□□□ 0.13
CLCN6-206ENST00000376496 SCN11AQ9UI33 1791 aa15.88■□□□□ 0.13
CLCN6-206ENST00000376496 SIPA1L3O60292 1781 aaPredicted RBP15.87■□□□□ 0.13
CLCN6-206ENST00000376496 DCAF5Q96JK2 942 aa15.87■□□□□ 0.13
CLCN6-206ENST00000376496 ZNF496Q96IT1 587 aaPredicted RBP15.87■□□□□ 0.13
CLCN6-206ENST00000376496 CABP4P57796 275 aa15.86■□□□□ 0.13
CLCN6-206ENST00000376496 PKD1L3Q7Z443 1732 aa15.86■□□□□ 0.13
CLCN6-206ENST00000376496 AHDC1Q5TGY3 1603 aaPredicted RBP15.86■□□□□ 0.13
CLCN6-206ENST00000376496 LNPKQ9C0E8 428 aa15.86■□□□□ 0.13
CLCN6-206ENST00000376496 ADAMTS7Q9UKP4 1686 aa15.86■□□□□ 0.13
CLCN6-206ENST00000376496 SMC5Q8IY18 1101 aa15.85■□□□□ 0.13
CLCN6-206ENST00000376496 UBAP1LF5GYI3 381 aa15.85■□□□□ 0.13
CLCN6-206ENST00000376496 PHLPP1O60346 1717 aa15.85■□□□□ 0.13
CLCN6-206ENST00000376496 C8orf34Q49A92 452 aa15.84■□□□□ 0.13
CLCN6-206ENST00000376496 PCDH11XQ9BZA7 1347 aa15.84■□□□□ 0.13
CLCN6-206ENST00000376496 PCDH11YQ9BZA8 1340 aa15.84■□□□□ 0.13
CLCN6-206ENST00000376496 PI4KAP2A4QPH2 592 aa15.84■□□□□ 0.13
CLCN6-206ENST00000376496 APBB1O00213 710 aa15.84■□□□□ 0.13
CLCN6-206ENST00000376496 AIMP1Q12904 312 aaKnown RBP15.84■□□□□ 0.13
CLCN6-206ENST00000376496 PI4KAP1Q8N8J0 262 aa15.84■□□□□ 0.13
CLCN6-206ENST00000376496 HEG1Q9ULI3 1381 aa15.83■□□□□ 0.13
CLCN6-206ENST00000376496 TOM1O60784 492 aa15.83■□□□□ 0.12
CLCN6-206ENST00000376496 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.12
CLCN6-206ENST00000376496 MYL6BP14649 208 aa15.83■□□□□ 0.12
CLCN6-206ENST00000376496 CCT4P50991 539 aaKnown RBP15.83■□□□□ 0.12
CLCN6-206ENST00000376496 ANKRD45Q5TZF3 282 aa15.83■□□□□ 0.12
CLCN6-206ENST00000376496 CHMP4BQ9H444 224 aaKnown RBP15.83■□□□□ 0.12
CLCN6-206ENST00000376496 USP16Q9Y5T5 823 aa15.83■□□□□ 0.12
CLCN6-206ENST00000376496 SOS1Q07889 1333 aaPredicted RBP15.83■□□□□ 0.12
CLCN6-206ENST00000376496 PARP4Q9UKK3 1724 aaKnown RBP15.83■□□□□ 0.12
CLCN6-206ENST00000376496 HOXB7P09629 217 aa15.82■□□□□ 0.12
CLCN6-206ENST00000376496 TTC5Q8N0Z6 440 aa15.82■□□□□ 0.12
CLCN6-206ENST00000376496 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
CLCN6-206ENST00000376496 FAM161AQ3B820 660 aa15.82■□□□□ 0.12
CLCN6-206ENST00000376496 CEP85Q6P2H3 762 aa15.82■□□□□ 0.12
CLCN6-206ENST00000376496 DBF4Q9UBU7 674 aaPredicted RBP15.81■□□□□ 0.12
CLCN6-206ENST00000376496 C5P01031 1676 aa15.81■□□□□ 0.12
CLCN6-206ENST00000376496 HSP90AB1P08238 724 aaKnown RBP15.81■□□□□ 0.12
CLCN6-206ENST00000376496 KAT6BQ8WYB5 2073 aa15.8■□□□□ 0.12
CLCN6-206ENST00000376496 PTCD1O75127 700 aaKnown RBP15.8■□□□□ 0.12
CLCN6-206ENST00000376496 NUCB1Q02818 461 aa15.8■□□□□ 0.12
CLCN6-206ENST00000376496 CACNA1FO60840 1977 aa15.8■□□□□ 0.12
CLCN6-206ENST00000376496 PDIA6Q15084 440 aa15.8■□□□□ 0.12
CLCN6-206ENST00000376496 ANKRD44Q8N8A2 993 aa15.8■□□□□ 0.12
CLCN6-206ENST00000376496 SHANK3Q9BYB0 1731 aa15.8■□□□□ 0.12
CLCN6-206ENST00000376496 ADCY9O60503 1353 aa15.8■□□□□ 0.12
CLCN6-206ENST00000376496 CHD1LQ86WJ1 897 aa15.79■□□□□ 0.12
CLCN6-206ENST00000376496 MSH5O43196 834 aa15.79■□□□□ 0.12
CLCN6-206ENST00000376496 USP44Q9H0E7 712 aa15.79■□□□□ 0.12
CLCN6-206ENST00000376496 MAP3K2Q9Y2U5 619 aa15.79■□□□□ 0.12
CLCN6-206ENST00000376496 COL14A1Q05707 1796 aaKnown RBP15.79■□□□□ 0.12
CLCN6-206ENST00000376496 SEC24BO95487 1268 aa15.78■□□□□ 0.12
CLCN6-206ENST00000376496 COL22A1Q8NFW1 1626 aaPredicted RBP15.78■□□□□ 0.12
CLCN6-206ENST00000376496 DNAAF4Q8WXU2 420 aa15.78■□□□□ 0.12
CLCN6-206ENST00000376496 LRRFIP2Q9Y608 721 aaKnown RBP15.78■□□□□ 0.12
CLCN6-206ENST00000376496 MRC1P22897 1456 aa15.78■□□□□ 0.12
CLCN6-206ENST00000376496 SMARCA5O60264 1052 aaPredicted RBP15.78■□□□□ 0.12
CLCN6-206ENST00000376496 FMNL2Q96PY5 1086 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms