RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 SYNCQ9H7C4 482 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 NDC80O14777 642 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 TRAF1Q13077 416 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 FYCO1Q9BQS8 1478 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 KMT5BQ4FZB7 885 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
SCN2A-203ENST00000375437 TNMDQ9H2S6 317 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 FAM193AP78312 1265 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC12Q8WUD4 166 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-203ENST00000375437 NLRP6P59044 892 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 PROSER2Q86WR7 435 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-203ENST00000375437 RAI14Q9P0K7 980 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 AKAP2Q9Y2D5 859 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 GMNNO75496 209 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC178Q5BJE1 867 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 FAM107BQ9H098 131 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 OPA1O60313 960 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 MAP7D1Q3KQU3 841 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 IFI16Q16666 785 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 EFCAB5A4FU69 1503 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 FKBP4Q02790 459 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 LUZP1Q86V48 1076 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CEP112Q8N8E3 955 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 KIAA1524Q8TCG1 905 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 ARHGAP5Q13017 1502 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCT4P50991 539 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 OTUD6BQ8N6M0 293 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 ANAPC4Q9UJX5 808 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 ST20-MTHFSA0A0A6YYL1 179 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 SURF6O75683 361 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 MTHFSP49914 203 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 FAM69CQ0P6D2 419 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 DDX46Q7L014 1031 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 PYM1Q9BRP8 204 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 BEGAINQ9BUH8 593 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 AMPD3Q01432 767 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC96Q2M329 555 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC174Q6PII3 467 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC83Q8IWF9 413 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 SYCP3Q8IZU3 236 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 HMGB3O15347 200 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 USO1O60763 962 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 KRT85P78386 507 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 ZNF444Q8N0Y2 327 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CNTLNQ9NXG0 1405 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 SPECC1LQ69YQ0 1117 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 TBC1D5Q92609 795 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 NCAPGQ9BPX3 1015 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 SMARCA4P51532 1647 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC6Q16204 474 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 GOLGA6L9A6NEM1 432 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 CASTP20810 708 aaKnown RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 ARHGAP29Q52LW3 1261 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 DDX54Q8TDD1 881 aaKnown RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 NOL3O60936 208 aaKnown RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 THEMISQ8N1K5 641 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 AIDAQ96BJ3 306 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 LRRC27Q9C0I9 530 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 PLEKHH2Q8IVE3 1493 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 MACROD2A1Z1Q3 448 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 TMCO3Q6UWJ1 677 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC89Q8N998 374 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 ZBED9Q6R2W3 1325 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 CECR2Q9BXF3 1484 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 C22orf23Q9BZE7 217 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 CEBPZQ03701 1054 aaKnown RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 UBA5Q9GZZ9 404 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 HLA-DOAP06340 250 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 FAM114A1Q8IWE2 563 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 BICD1Q96G01 975 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 RIOK3O14730 519 aaKnown RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 GABPB2Q8TAK5 448 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 STX6O43752 255 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 IQCA1Q86XH1 822 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 MSANTD4Q8NCY6 345 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CALML4Q96GE6 196 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 LPXNO60711 386 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 SATB1Q01826 763 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 U3KPZ7 1027 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 RAB3GAP2Q9H2M9 1393 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 KIF5CO60282 957 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 PAFAH1B1P43034 410 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC102AQ96A19 550 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 IQCGQ9H095 443 aaKnown RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 SAMM50Q9Y512 469 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 WDR33Q9C0J8 1336 aaKnown RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 KIF2AO00139 706 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 HMOX1P09601 288 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 ST5P78524 1137 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CABP5Q9NP86 173 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 PUF60Q9UHX1 559 aaKnown RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 COG6Q9Y2V7 657 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 WDR63Q8IWG1 891 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CEP126Q9P2H0 1117 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 MAP4K4O95819 1239 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CASQ1P31415 396 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 ATP6V1E1P36543 226 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms