RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 ATP6V1AP38606 617 aa20.58■□□□□ 0.89
APOA1-205ENST00000375329 U2AF1Q01081 240 aaKnown RBP eCLIP20.58■□□□□ 0.89
APOA1-205ENST00000375329 ATF5Q9Y2D1 282 aaPredicted RBP20.58■□□□□ 0.89
APOA1-205ENST00000375329 PNPLA7Q6ZV29 1317 aa20.57■□□□□ 0.88
APOA1-205ENST00000375329 FCHSD2O94868 740 aa20.57■□□□□ 0.88
APOA1-205ENST00000375329 NFATC2IPQ8NCF5 419 aa20.57■□□□□ 0.88
APOA1-205ENST00000375329 AK7Q96M32 723 aa20.57■□□□□ 0.88
APOA1-205ENST00000375329 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
APOA1-205ENST00000375329 RBM42Q9BTD8 480 aaKnown RBP20.55■□□□□ 0.88
APOA1-205ENST00000375329 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
APOA1-205ENST00000375329 TUBGCP6Q96RT7 1819 aa20.55■□□□□ 0.88
APOA1-205ENST00000375329 C4BP0C0L5 1744 aa20.54■□□□□ 0.88
APOA1-205ENST00000375329 GNAT3A8MTJ3 354 aa20.54■□□□□ 0.88
APOA1-205ENST00000375329 MSH5O43196 834 aa20.54■□□□□ 0.88
APOA1-205ENST00000375329 NEFMP07197 916 aa20.54■□□□□ 0.88
APOA1-205ENST00000375329 POLD1P28340 1107 aa20.54■□□□□ 0.88
APOA1-205ENST00000375329 PRKAR2BP31323 418 aa20.54■□□□□ 0.88
APOA1-205ENST00000375329 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
APOA1-205ENST00000375329 VIRMAQ69YN4 1812 aaKnown RBP20.54■□□□□ 0.88
APOA1-205ENST00000375329 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
APOA1-205ENST00000375329 PTGER2P43116 358 aa20.53■□□□□ 0.88
APOA1-205ENST00000375329 MAP3K5Q99683 1374 aa20.52■□□□□ 0.88
APOA1-205ENST00000375329 YY1P25490 414 aa20.52■□□□□ 0.88
APOA1-205ENST00000375329 DIEXFQ68CQ4 756 aaKnown RBP20.52■□□□□ 0.88
APOA1-205ENST00000375329 PNNQ9H307 717 aaKnown RBP20.52■□□□□ 0.88
APOA1-205ENST00000375329 LGR6Q9HBX8 967 aa20.52■□□□□ 0.88
APOA1-205ENST00000375329 COL23A1Q86Y22 540 aaPredicted RBP20.51■□□□□ 0.87
APOA1-205ENST00000375329 LINC00116Q8NCU8 138 aa20.51■□□□□ 0.87
APOA1-205ENST00000375329 DCAF8L1A6NGE4 600 aa20.5■□□□□ 0.87
APOA1-205ENST00000375329 SSFA2P28290 1259 aa20.5■□□□□ 0.87
APOA1-205ENST00000375329 TEFQ10587 303 aa20.5■□□□□ 0.87
APOA1-205ENST00000375329 ITPK1Q13572 414 aa20.5■□□□□ 0.87
APOA1-205ENST00000375329 RC3H1Q5TC82 1133 aaKnown RBP20.5■□□□□ 0.87
APOA1-205ENST00000375329 SGIP1Q9BQI5 828 aa20.5■□□□□ 0.87
APOA1-205ENST00000375329 PTCD1O75127 700 aaKnown RBP20.49■□□□□ 0.87
APOA1-205ENST00000375329 ARXQ96QS3 562 aa20.49■□□□□ 0.87
APOA1-205ENST00000375329 UBR3Q6ZT12 1888 aa20.49■□□□□ 0.87
APOA1-205ENST00000375329 MRC1P22897 1456 aa20.49■□□□□ 0.87
APOA1-205ENST00000375329 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
APOA1-205ENST00000375329 PHACTR3Q96KR7 559 aa20.48■□□□□ 0.87
APOA1-205ENST00000375329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.47■□□□□ 0.87
APOA1-205ENST00000375329 GNPATO15228 680 aa20.47■□□□□ 0.87
APOA1-205ENST00000375329 RTF1Q92541 710 aaKnown RBP20.47■□□□□ 0.87
APOA1-205ENST00000375329 RTCBQ9Y3I0 505 aaKnown RBP20.47■□□□□ 0.87
APOA1-205ENST00000375329 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
APOA1-205ENST00000375329 SLC4A9Q96Q91 983 aa20.46■□□□□ 0.87
APOA1-205ENST00000375329 COL24A1Q17RW2 1714 aa20.46■□□□□ 0.87
APOA1-205ENST00000375329 CNTNAP4Q9C0A0 1308 aa20.46■□□□□ 0.87
APOA1-205ENST00000375329 HTATSF1O43719 755 aaKnown RBP20.45■□□□□ 0.86
APOA1-205ENST00000375329 PHF14O94880 888 aa20.45■□□□□ 0.86
APOA1-205ENST00000375329 ADRA2BP18089 450 aa20.45■□□□□ 0.86
APOA1-205ENST00000375329 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
APOA1-205ENST00000375329 IL17REQ8NFR9 667 aa20.45■□□□□ 0.86
APOA1-205ENST00000375329 TRAPPC3LQ5T215 181 aa20.44■□□□□ 0.86
APOA1-205ENST00000375329 VSIG10Q8N0Z9 540 aa20.43■□□□□ 0.86
APOA1-205ENST00000375329 FHDC1Q9C0D6 1143 aaPredicted RBP20.43■□□□□ 0.86
APOA1-205ENST00000375329 COL5A3P25940 1745 aaPredicted RBP20.43■□□□□ 0.86
APOA1-205ENST00000375329 RPS6KA4O75676 772 aa20.42■□□□□ 0.86
APOA1-205ENST00000375329 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
APOA1-205ENST00000375329 SYT17Q9BSW7 474 aa20.42■□□□□ 0.86
APOA1-205ENST00000375329 CEMIPQ8WUJ3 1361 aa20.42■□□□□ 0.86
APOA1-205ENST00000375329 CICQ96RK0 1608 aaPredicted RBP20.42■□□□□ 0.86
APOA1-205ENST00000375329 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
APOA1-205ENST00000375329 CHD4Q14839 1912 aa20.41■□□□□ 0.86
APOA1-205ENST00000375329 ANP32CO43423 234 aa20.4■□□□□ 0.86
APOA1-205ENST00000375329 CRKLP46109 303 aaKnown RBP20.4■□□□□ 0.86
APOA1-205ENST00000375329 MYH14Q7Z406 1995 aaKnown RBP20.4■□□□□ 0.86
APOA1-205ENST00000375329 MSL1Q68DK7 614 aa20.39■□□□□ 0.85
APOA1-205ENST00000375329 ZNF790Q6PG37 636 aa20.39■□□□□ 0.85
APOA1-205ENST00000375329 TEX13AQ9BXU3 409 aaPredicted RBP20.39■□□□□ 0.85
APOA1-205ENST00000375329 PRKRIP1Q9H875 184 aaPredicted RBP20.39■□□□□ 0.85
APOA1-205ENST00000375329 RFC4P35249 363 aa20.38■□□□□ 0.85
APOA1-205ENST00000375329 AMIGO3Q86WK7 504 aa20.38■□□□□ 0.85
APOA1-205ENST00000375329 SIPA1L3O60292 1781 aaPredicted RBP20.38■□□□□ 0.85
APOA1-205ENST00000375329 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 TJP1Q07157 1748 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 BTBD11A6QL63 1104 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 STARD3NLO95772 234 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 DNAJC10Q8IXB1 793 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 KLHL34Q8N239 644 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 NLGN1Q8N2Q7 840 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 PLEKHF1Q96S99 279 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 CCDC87Q9NVE4 849 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 KCPQ6ZWJ8 1503 aa20.37■□□□□ 0.85
APOA1-205ENST00000375329 WDR43Q15061 677 aaKnown RBP eCLIP20.36■□□□□ 0.85
APOA1-205ENST00000375329 NFE2L2Q16236 605 aa20.36■□□□□ 0.85
APOA1-205ENST00000375329 ARHGEF1Q92888 912 aaKnown RBP20.36■□□□□ 0.85
APOA1-205ENST00000375329 FMNL2Q96PY5 1086 aa20.36■□□□□ 0.85
APOA1-205ENST00000375329 CYP19A1P11511 503 aaPredicted RBP20.35■□□□□ 0.85
APOA1-205ENST00000375329 MCM10Q7L590 875 aa20.35■□□□□ 0.85
APOA1-205ENST00000375329 DLG5Q8TDM6 1919 aa20.34■□□□□ 0.85
APOA1-205ENST00000375329 INTS5Q6P9B9 1019 aaKnown RBP20.34■□□□□ 0.85
APOA1-205ENST00000375329 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
APOA1-205ENST00000375329 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
APOA1-205ENST00000375329 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
APOA1-205ENST00000375329 TAF7Q15545 349 aaPredicted RBP20.33■□□□□ 0.85
APOA1-205ENST00000375329 CD2APQ9Y5K6 639 aa20.33■□□□□ 0.85
APOA1-205ENST00000375329 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
APOA1-205ENST00000375329 ZPR1O75312 459 aa20.31■□□□□ 0.84
APOA1-205ENST00000375329 LMOD3Q0VAK6 560 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms