RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 USHBP1Q8N6Y0 703 aa10.22□□□□□ -0.77
UBR4-202ENST00000375224 NCAPD2Q15021 1401 aa10.22□□□□□ -0.77
UBR4-202ENST00000375224 HMMRO75330 724 aa10.22□□□□□ -0.77
UBR4-202ENST00000375224 SEC24BO95487 1268 aa10.22□□□□□ -0.77
UBR4-202ENST00000375224 PAXIP1Q6ZW49 1069 aaPredicted RBP10.22□□□□□ -0.77
UBR4-202ENST00000375224 TBC1D32Q96NH3 1257 aa10.22□□□□□ -0.77
UBR4-202ENST00000375224 DCTPP1Q9H773 170 aa10.22□□□□□ -0.77
UBR4-202ENST00000375224 HOXB7P09629 217 aa10.21□□□□□ -0.77
UBR4-202ENST00000375224 BMP2KLQ5H9B9 411 aa10.21□□□□□ -0.77
UBR4-202ENST00000375224 CADPS2Q86UW7 1296 aa10.21□□□□□ -0.77
UBR4-202ENST00000375224 SIRT2Q8IXJ6 389 aa10.21□□□□□ -0.77
UBR4-202ENST00000375224 LMO7Q8WWI1 1683 aa10.21□□□□□ -0.77
UBR4-202ENST00000375224 TMEM94Q12767 1356 aa10.21□□□□□ -0.77
UBR4-202ENST00000375224 OVOS2A0A0G2JMS6 1433 aa10.21□□□□□ -0.78
UBR4-202ENST00000375224 ANKRD24Q8TF21 1146 aa10.21□□□□□ -0.78
UBR4-202ENST00000375224 XPCQ01831 940 aaPredicted RBP10.2□□□□□ -0.78
UBR4-202ENST00000375224 C1orf141Q5JVX7 400 aa10.2□□□□□ -0.78
UBR4-202ENST00000375224 FAM208AQ9UK61 1670 aaKnown RBP10.2□□□□□ -0.78
UBR4-202ENST00000375224 TEFQ10587 303 aa10.2□□□□□ -0.78
UBR4-202ENST00000375224 ZNF530Q6P9A1 599 aaPredicted RBP10.2□□□□□ -0.78
UBR4-202ENST00000375224 ALS2Q96Q42 1657 aa10.2□□□□□ -0.78
UBR4-202ENST00000375224 MED1Q15648 1581 aaPredicted RBP10.2□□□□□ -0.78
UBR4-202ENST00000375224 FLIIQ13045 1269 aa10.2□□□□□ -0.78
UBR4-202ENST00000375224 CAMTA1Q9Y6Y1 1673 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 NPHP3Q7Z494 1330 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 GNAI3P08754 354 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 CEP85Q6P2H3 762 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 BBXQ8WY36 941 aaPredicted RBP10.19□□□□□ -0.78
UBR4-202ENST00000375224 RGPD2P0DJD1 1756 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 FKBP5Q13451 457 aaPredicted RBP10.19□□□□□ -0.78
UBR4-202ENST00000375224 SLC4A10Q6U841 1118 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 G2E3Q7L622 706 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 NAP1L2Q9ULW6 460 aaPredicted RBP10.19□□□□□ -0.78
UBR4-202ENST00000375224 PXDNLA1KZ92 1463 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 LMTK3Q96Q04 1460 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 ATP10DQ9P241 1426 aa10.19□□□□□ -0.78
UBR4-202ENST00000375224 LRRC59Q96AG4 307 aaKnown RBP10.19□□□□□ -0.78
UBR4-202ENST00000375224 GNAI2P04899 355 aa10.18□□□□□ -0.78
UBR4-202ENST00000375224 HDGFL1Q5TGJ6 251 aa10.18□□□□□ -0.78
UBR4-202ENST00000375224 MEIS3Q99687 375 aa10.18□□□□□ -0.78
UBR4-202ENST00000375224 C22orf23Q9BZE7 217 aa10.18□□□□□ -0.78
UBR4-202ENST00000375224 PLEKHG2Q9H7P9 1386 aa10.18□□□□□ -0.78
UBR4-202ENST00000375224 KDM3BQ7LBC6 1761 aa10.18□□□□□ -0.78
UBR4-202ENST00000375224 ABCC6O95255 1503 aa10.17□□□□□ -0.78
UBR4-202ENST00000375224 RNMTO43148 476 aaKnown RBP10.17□□□□□ -0.78
UBR4-202ENST00000375224 MFAP1P55081 439 aaKnown RBP10.17□□□□□ -0.78
UBR4-202ENST00000375224 EIF4A1P60842 406 aaKnown RBP10.17□□□□□ -0.78
UBR4-202ENST00000375224 N4BP2Q86UW6 1770 aaPredicted RBP10.17□□□□□ -0.78
UBR4-202ENST00000375224 BTBD11A6QL63 1104 aa10.17□□□□□ -0.78
UBR4-202ENST00000375224 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
UBR4-202ENST00000375224 F6X3S4 739 aa10.16□□□□□ -0.78
UBR4-202ENST00000375224 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
UBR4-202ENST00000375224 LGR6Q9HBX8 967 aa10.16□□□□□ -0.78
UBR4-202ENST00000375224 ERBB3P21860 1342 aa10.16□□□□□ -0.78
UBR4-202ENST00000375224 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.78
UBR4-202ENST00000375224 RAPGEF4Q8WZA2 1011 aa10.15□□□□□ -0.78
UBR4-202ENST00000375224 NCLP19338 710 aaKnown RBP10.15□□□□□ -0.78
UBR4-202ENST00000375224 MPRIPQ6WCQ1 1025 aa10.15□□□□□ -0.78
UBR4-202ENST00000375224 CDC45O75419 566 aa10.15□□□□□ -0.79
UBR4-202ENST00000375224 ZC3H6P61129 1189 aaKnown RBP10.15□□□□□ -0.79
UBR4-202ENST00000375224 PLEKHM2Q8IWE5 1019 aa10.15□□□□□ -0.79
UBR4-202ENST00000375224 NECTIN2Q92692 538 aa10.15□□□□□ -0.79
UBR4-202ENST00000375224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.15□□□□□ -0.793e-10■■■□□ 14.8
UBR4-202ENST00000375224 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.79
UBR4-202ENST00000375224 TATP17735 454 aaPredicted RBP10.14□□□□□ -0.79
UBR4-202ENST00000375224 RGPD5Q99666 1765 aa10.14□□□□□ -0.79
UBR4-202ENST00000375224 RBM25P49756 843 aaKnown RBP10.14□□□□□ -0.79
UBR4-202ENST00000375224 SPG7Q9UQ90 795 aa10.14□□□□□ -0.79
UBR4-202ENST00000375224 ATP8B2P98198 1209 aa10.13□□□□□ -0.79
UBR4-202ENST00000375224 EIF2S2P20042 333 aaKnown RBP10.13□□□□□ -0.79
UBR4-202ENST00000375224 TTC22Q5TAA0 569 aa10.13□□□□□ -0.79
UBR4-202ENST00000375224 SRCIN1Q9C0H9 1055 aa10.13□□□□□ -0.79
UBR4-202ENST00000375224 SPATA31A3Q5VYP0 1347 aa10.13□□□□□ -0.79
UBR4-202ENST00000375224 ADAMTS7Q9UKP4 1686 aa10.13□□□□□ -0.79
UBR4-202ENST00000375224 CASC1Q6TDU7 716 aa10.13□□□□□ -0.79
UBR4-202ENST00000375224 NLRP2Q9NX02 1062 aa10.13□□□□□ -0.79
UBR4-202ENST00000375224 DBF4Q9UBU7 674 aaPredicted RBP10.13□□□□□ -0.79
UBR4-202ENST00000375224 HDAC5Q9UQL6 1122 aa10.13□□□□□ -0.79
UBR4-202ENST00000375224 UBTFL1P0CB47 393 aaPredicted RBP10.12□□□□□ -0.79
UBR4-202ENST00000375224 PXDNQ92626 1479 aa10.12□□□□□ -0.79
UBR4-202ENST00000375224 CPDO75976 1380 aa10.12□□□□□ -0.79
UBR4-202ENST00000375224 COL18A1P39060 1754 aa10.12□□□□□ -0.79
UBR4-202ENST00000375224 CSB-PGBD3P0DP91 1061 aa10.12□□□□□ -0.79
UBR4-202ENST00000375224 HSPA2P54652 639 aa10.12□□□□□ -0.79
UBR4-202ENST00000375224 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
UBR4-202ENST00000375224 SIPA1L3O60292 1781 aaPredicted RBP10.11□□□□□ -0.79
UBR4-202ENST00000375224 DNAAF4Q8WXU2 420 aa10.11□□□□□ -0.79
UBR4-202ENST00000375224 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
UBR4-202ENST00000375224 CHPF2Q9P2E5 772 aa10.11□□□□□ -0.79
UBR4-202ENST00000375224 HSP90AB1P08238 724 aaKnown RBP10.11□□□□□ -0.79
UBR4-202ENST00000375224 HSCBQ8IWL3 235 aa10.11□□□□□ -0.79
UBR4-202ENST00000375224 OSBPL3Q9H4L5 887 aa10.11□□□□□ -0.79
UBR4-202ENST00000375224 PHAXQ9H814 394 aaKnown RBP10.11□□□□□ -0.79
UBR4-202ENST00000375224 HEG1Q9ULI3 1381 aa10.11□□□□□ -0.79
UBR4-202ENST00000375224 GIGYF1O75420 1035 aaPredicted RBP10.1□□□□□ -0.79
UBR4-202ENST00000375224 NFKBIBQ15653 356 aa10.1□□□□□ -0.79
UBR4-202ENST00000375224 IFNL2Q8IZJ0 200 aa10.1□□□□□ -0.79
UBR4-202ENST00000375224 LRRCC1Q9C099 1032 aa10.1□□□□□ -0.79
UBR4-202ENST00000375224 USP44Q9H0E7 712 aa10.1□□□□□ -0.79
UBR4-202ENST00000375224 HYPKQ9NX55 129 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms