RNA–Protein interactions for RNA: ENST00000374484.8

CUTA-201, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 3

Gene CUTA, Length 658 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-201ENST00000374484 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
CUTA-201ENST00000374484 HMOX1P09601 288 aa18.36■□□□□ 0.53
CUTA-201ENST00000374484 TJP1Q07157 1748 aa18.36■□□□□ 0.53
CUTA-201ENST00000374484 MAP3K5Q99683 1374 aa18.35■□□□□ 0.53
CUTA-201ENST00000374484 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
CUTA-201ENST00000374484 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
CUTA-201ENST00000374484 PPP1R1BQ9UD71 204 aaPredicted RBP18.34■□□□□ 0.53
CUTA-201ENST00000374484 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
CUTA-201ENST00000374484 CABP4P57796 275 aa18.33■□□□□ 0.52
CUTA-201ENST00000374484 MTHFSDQ2M296 383 aaKnown RBP18.33■□□□□ 0.52
CUTA-201ENST00000374484 DLG5Q8TDM6 1919 aa18.33■□□□□ 0.52
CUTA-201ENST00000374484 C4AP0C0L4 1744 aa18.32■□□□□ 0.52
CUTA-201ENST00000374484 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
CUTA-201ENST00000374484 ITPK1Q13572 414 aa18.31■□□□□ 0.52
CUTA-201ENST00000374484 CNGB1Q14028 1251 aaPredicted RBP18.31■□□□□ 0.52
CUTA-201ENST00000374484 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
CUTA-201ENST00000374484 LINC00116Q8NCU8 138 aa18.31■□□□□ 0.52
CUTA-201ENST00000374484 SSFA2P28290 1259 aa18.3■□□□□ 0.52
CUTA-201ENST00000374484 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
CUTA-201ENST00000374484 NFATC2IPQ8NCF5 419 aa18.3■□□□□ 0.52
CUTA-201ENST00000374484 SLC4A9Q96Q91 983 aa18.3■□□□□ 0.52
CUTA-201ENST00000374484 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
CUTA-201ENST00000374484 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
CUTA-201ENST00000374484 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
CUTA-201ENST00000374484 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
CUTA-201ENST00000374484 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
CUTA-201ENST00000374484 AK7Q96M32 723 aa18.29■□□□□ 0.52
CUTA-201ENST00000374484 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
CUTA-201ENST00000374484 RC3H1Q5TC82 1133 aaKnown RBP18.28■□□□□ 0.52
CUTA-201ENST00000374484 ARXQ96QS3 562 aa18.28■□□□□ 0.52
CUTA-201ENST00000374484 LGR6Q9HBX8 967 aa18.28■□□□□ 0.52
CUTA-201ENST00000374484 CNTNAP4Q9C0A0 1308 aa18.27■□□□□ 0.52
CUTA-201ENST00000374484 FCHSD2O94868 740 aa18.27■□□□□ 0.52
CUTA-201ENST00000374484 AMIGO3Q86WK7 504 aa18.27■□□□□ 0.52
CUTA-201ENST00000374484 CHD4Q14839 1912 aa18.27■□□□□ 0.51
CUTA-201ENST00000374484 CEMIPQ8WUJ3 1361 aa18.27■□□□□ 0.51
CUTA-201ENST00000374484 POLD1P28340 1107 aa18.26■□□□□ 0.51
CUTA-201ENST00000374484 FHDC1Q9C0D6 1143 aaPredicted RBP18.26■□□□□ 0.51
CUTA-201ENST00000374484 KIF13BQ9NQT8 1826 aa18.26■□□□□ 0.51
CUTA-201ENST00000374484 GNAT3A8MTJ3 354 aa18.25■□□□□ 0.51
CUTA-201ENST00000374484 ZEB1P37275 1124 aaPredicted RBP18.25■□□□□ 0.51
CUTA-201ENST00000374484 RALBP1Q15311 655 aa18.25■□□□□ 0.51
CUTA-201ENST00000374484 SYT17Q9BSW7 474 aa18.25■□□□□ 0.51
CUTA-201ENST00000374484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.24■□□□□ 0.51
CUTA-201ENST00000374484 PRKAR2BP31323 418 aa18.24■□□□□ 0.51
CUTA-201ENST00000374484 PHACTR3Q96KR7 559 aa18.24■□□□□ 0.51
CUTA-201ENST00000374484 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
CUTA-201ENST00000374484 GNPATO15228 680 aa18.22■□□□□ 0.51
CUTA-201ENST00000374484 U2AF1L5P0DN76 240 aaPredicted RBP18.22■□□□□ 0.51
CUTA-201ENST00000374484 ADRA2BP18089 450 aa18.22■□□□□ 0.51
CUTA-201ENST00000374484 U2AF1Q01081 240 aaKnown RBP eCLIP18.22■□□□□ 0.51
CUTA-201ENST00000374484 IL17REQ8NFR9 667 aa18.22■□□□□ 0.51
CUTA-201ENST00000374484 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
CUTA-201ENST00000374484 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
CUTA-201ENST00000374484 DDX10Q13206 875 aaKnown RBP18.21■□□□□ 0.51
CUTA-201ENST00000374484 VSIG10Q8N0Z9 540 aa18.21■□□□□ 0.51
CUTA-201ENST00000374484 UTRNP46939 3433 aa18.2■□□□□ 0.5
CUTA-201ENST00000374484 MSH5O43196 834 aa18.2■□□□□ 0.5
CUTA-201ENST00000374484 RTCBQ9Y3I0 505 aaKnown RBP18.2■□□□□ 0.5
CUTA-201ENST00000374484 HTATSF1O43719 755 aaKnown RBP18.19■□□□□ 0.5
CUTA-201ENST00000374484 PHF14O94880 888 aa18.18■□□□□ 0.5
CUTA-201ENST00000374484 CRKLP46109 303 aaKnown RBP18.18■□□□□ 0.5
CUTA-201ENST00000374484 TEFQ10587 303 aa18.18■□□□□ 0.5
CUTA-201ENST00000374484 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
CUTA-201ENST00000374484 GOLGB1Q14789 3259 aaKnown RBP18.18■□□□□ 0.5
CUTA-201ENST00000374484 KIAA1551Q9HCM1 1747 aa18.18■□□□□ 0.5
CUTA-201ENST00000374484 KDM3BQ7LBC6 1761 aa18.17■□□□□ 0.5
CUTA-201ENST00000374484 SLC39A6Q13433 755 aa18.17■□□□□ 0.5
CUTA-201ENST00000374484 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
CUTA-201ENST00000374484 PLEKHF1Q96S99 279 aa18.17■□□□□ 0.5
CUTA-201ENST00000374484 INTS5Q6P9B9 1019 aaKnown RBP18.16■□□□□ 0.5
CUTA-201ENST00000374484 ZNF790Q6PG37 636 aa18.16■□□□□ 0.5
CUTA-201ENST00000374484 SMIM5Q71RC9 77 aa18.16■□□□□ 0.5
CUTA-201ENST00000374484 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
CUTA-201ENST00000374484 DCAF8L1A6NGE4 600 aa18.15■□□□□ 0.5
CUTA-201ENST00000374484 CYP19A1P11511 503 aaPredicted RBP18.15■□□□□ 0.5
CUTA-201ENST00000374484 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
CUTA-201ENST00000374484 CD2APQ9Y5K6 639 aa18.15■□□□□ 0.5
CUTA-201ENST00000374484 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.5
CUTA-201ENST00000374484 BRCA1P38398 1863 aaKnown RBP18.14■□□□□ 0.49
CUTA-201ENST00000374484 DNAJC10Q8IXB1 793 aa18.14■□□□□ 0.49
CUTA-201ENST00000374484 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
CUTA-201ENST00000374484 CCDC87Q9NVE4 849 aa18.14■□□□□ 0.49
CUTA-201ENST00000374484 HEG1Q9ULI3 1381 aa18.14■□□□□ 0.49
CUTA-201ENST00000374484 NRXN2Q9P2S2 1712 aa18.13■□□□□ 0.49
CUTA-201ENST00000374484 TTC5Q8N0Z6 440 aa18.13■□□□□ 0.49
CUTA-201ENST00000374484 NLGN1Q8N2Q7 840 aa18.13■□□□□ 0.49
CUTA-201ENST00000374484 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
CUTA-201ENST00000374484 GYS1P13807 737 aa18.12■□□□□ 0.49
CUTA-201ENST00000374484 RTF1Q92541 710 aaKnown RBP18.12■□□□□ 0.49
CUTA-201ENST00000374484 SOS1Q07889 1333 aaPredicted RBP18.12■□□□□ 0.49
CUTA-201ENST00000374484 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
CUTA-201ENST00000374484 NEFMP07197 916 aa18.11■□□□□ 0.49
CUTA-201ENST00000374484 RFC4P35249 363 aa18.11■□□□□ 0.49
CUTA-201ENST00000374484 ZNF496Q96IT1 587 aaPredicted RBP18.11■□□□□ 0.49
CUTA-201ENST00000374484 TEX13AQ9BXU3 409 aaPredicted RBP18.11■□□□□ 0.49
CUTA-201ENST00000374484 PRKRIP1Q9H875 184 aaPredicted RBP18.11■□□□□ 0.49
CUTA-201ENST00000374484 USP42Q9H9J4 1324 aaKnown RBP18.11■□□□□ 0.49
CUTA-201ENST00000374484 BCORQ6W2J9 1755 aa18.11■□□□□ 0.49
CUTA-201ENST00000374484 NLGN2Q8NFZ4 835 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms