RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 KRT27Q7Z3Y8 459 aa16.7■□□□□ 0.26
GJB1-202ENST00000374022 SLC52A2Q9HAB3 445 aa16.7■□□□□ 0.26
GJB1-202ENST00000374022 IFT57Q9NWB7 429 aa16.7■□□□□ 0.26
GJB1-202ENST00000374022 SLFN5Q08AF3 891 aa16.69■□□□□ 0.26
GJB1-202ENST00000374022 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
GJB1-202ENST00000374022 CABP4P57796 275 aa16.68■□□□□ 0.26
GJB1-202ENST00000374022 GNAI1P63096 354 aa16.68■□□□□ 0.26
GJB1-202ENST00000374022 TAF7Q15545 349 aaPredicted RBP16.68■□□□□ 0.26
GJB1-202ENST00000374022 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
GJB1-202ENST00000374022 BCL9O00512 1426 aa16.68■□□□□ 0.26
GJB1-202ENST00000374022 ZNF853P0CG23 659 aa16.68■□□□□ 0.26
GJB1-202ENST00000374022 FAM182BQ5T319 152 aa16.68■□□□□ 0.26
GJB1-202ENST00000374022 MYH16Q9H6N6 1097 aa16.68■□□□□ 0.26
GJB1-202ENST00000374022 BTAF1O14981 1849 aa16.67■□□□□ 0.26
GJB1-202ENST00000374022 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
GJB1-202ENST00000374022 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
GJB1-202ENST00000374022 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
GJB1-202ENST00000374022 CHL1O00533 1208 aa16.66■□□□□ 0.26
GJB1-202ENST00000374022 TRMT2AQ8IZ69 625 aaKnown RBP16.66■□□□□ 0.26
GJB1-202ENST00000374022 TSR2Q969E8 191 aaKnown RBP16.66■□□□□ 0.26
GJB1-202ENST00000374022 ACSBG1Q96GR2 724 aa16.66■□□□□ 0.26
GJB1-202ENST00000374022 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
GJB1-202ENST00000374022 MIS18AQ9NYP9 233 aa16.66■□□□□ 0.26
GJB1-202ENST00000374022 TSPYL4Q9UJ04 414 aa16.66■□□□□ 0.26
GJB1-202ENST00000374022 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
GJB1-202ENST00000374022 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
GJB1-202ENST00000374022 MBIPQ9NS73 344 aa16.65■□□□□ 0.26
GJB1-202ENST00000374022 BABAM1Q9NWV8 329 aa16.65■□□□□ 0.26
GJB1-202ENST00000374022 PRIM1P49642 420 aaKnown RBP16.64■□□□□ 0.26
GJB1-202ENST00000374022 DUSP27Q5VZP5 1158 aa16.64■□□□□ 0.26
GJB1-202ENST00000374022 EP400Q96L91 3159 aa16.64■□□□□ 0.25
GJB1-202ENST00000374022 BCL11AQ9H165 835 aa16.64■□□□□ 0.25
GJB1-202ENST00000374022 FAM196AQ6ZSG2 479 aa16.63■□□□□ 0.25
GJB1-202ENST00000374022 PIGBQ92521 554 aa16.62■□□□□ 0.25
GJB1-202ENST00000374022 KCNQ2O43526 872 aa16.61■□□□□ 0.25
GJB1-202ENST00000374022 SLC39A6Q13433 755 aa16.61■□□□□ 0.25
GJB1-202ENST00000374022 C5P01031 1676 aa16.61■□□□□ 0.25
GJB1-202ENST00000374022 KCNQ3O43525 872 aa16.6■□□□□ 0.25
GJB1-202ENST00000374022 ZNF790Q6PG37 636 aa16.6■□□□□ 0.25
GJB1-202ENST00000374022 KCPQ6ZWJ8 1503 aa16.6■□□□□ 0.25
GJB1-202ENST00000374022 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
GJB1-202ENST00000374022 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
GJB1-202ENST00000374022 EXOSC9Q06265 439 aaKnown RBP16.59■□□□□ 0.25
GJB1-202ENST00000374022 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
GJB1-202ENST00000374022 LY75O60449 1722 aa16.58■□□□□ 0.24
GJB1-202ENST00000374022 EIF4A1P60842 406 aaKnown RBP16.58■□□□□ 0.24
GJB1-202ENST00000374022 PTF1AQ7RTS3 328 aa16.58■□□□□ 0.24
GJB1-202ENST00000374022 ATG3Q9NT62 314 aa16.58■□□□□ 0.24
GJB1-202ENST00000374022 ASAP1Q9ULH1 1129 aa16.58■□□□□ 0.24
GJB1-202ENST00000374022 KRT24Q2M2I5 525 aa16.57■□□□□ 0.24
GJB1-202ENST00000374022 ANP32EQ9BTT0 268 aa16.57■□□□□ 0.24
GJB1-202ENST00000374022 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
GJB1-202ENST00000374022 C8orf58Q8NAV2 365 aa16.56■□□□□ 0.24
GJB1-202ENST00000374022 ZNF496Q96IT1 587 aaPredicted RBP16.56■□□□□ 0.24
GJB1-202ENST00000374022 CACNA1FO60840 1977 aa16.56■□□□□ 0.24
GJB1-202ENST00000374022 TRIM37O94972 964 aa16.55■□□□□ 0.24
GJB1-202ENST00000374022 TJP1Q07157 1748 aa16.55■□□□□ 0.24
GJB1-202ENST00000374022 ZNF831Q5JPB2 1677 aa16.55■□□□□ 0.24
GJB1-202ENST00000374022 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
GJB1-202ENST00000374022 CICQ96RK0 1608 aaPredicted RBP16.55■□□□□ 0.24
GJB1-202ENST00000374022 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
GJB1-202ENST00000374022 PALLDQ8WX93 1383 aa16.55■□□□□ 0.24
GJB1-202ENST00000374022 TSPYL6Q8N831 410 aa16.55■□□□□ 0.24
GJB1-202ENST00000374022 ELL2O00472 640 aaPredicted RBP16.54■□□□□ 0.24
GJB1-202ENST00000374022 PTCD1O75127 700 aaKnown RBP16.54■□□□□ 0.24
GJB1-202ENST00000374022 TWISTNBQ3B726 338 aaPredicted RBP16.54■□□□□ 0.24
GJB1-202ENST00000374022 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
GJB1-202ENST00000374022 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
GJB1-202ENST00000374022 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.24
GJB1-202ENST00000374022 RGPD3A6NKT7 1758 aaPredicted RBP16.52■□□□□ 0.24
GJB1-202ENST00000374022 RGPD4Q7Z3J3 1758 aa16.52■□□□□ 0.24
GJB1-202ENST00000374022 COL5A3P25940 1745 aaPredicted RBP16.52■□□□□ 0.24
GJB1-202ENST00000374022 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
GJB1-202ENST00000374022 GIGYF1O75420 1035 aaPredicted RBP16.52■□□□□ 0.23
GJB1-202ENST00000374022 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.23
GJB1-202ENST00000374022 VAMP4O75379 141 aa16.51■□□□□ 0.23
GJB1-202ENST00000374022 HOXB7P09629 217 aa16.51■□□□□ 0.23
GJB1-202ENST00000374022 SNRPA1P09661 255 aaKnown RBP16.51■□□□□ 0.23
GJB1-202ENST00000374022 PRAMEF22A3QJZ6 481 aa16.5■□□□□ 0.23
GJB1-202ENST00000374022 LOC102724428A0A0B4J2F2 783 aa16.49■□□□□ 0.23
GJB1-202ENST00000374022 SIK1P57059 783 aa16.49■□□□□ 0.23
GJB1-202ENST00000374022 VSIG10Q8N0Z9 540 aa16.49■□□□□ 0.23
GJB1-202ENST00000374022 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
GJB1-202ENST00000374022 ZNF428Q96B54 188 aa16.49■□□□□ 0.23
GJB1-202ENST00000374022 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
GJB1-202ENST00000374022 HDGFL1Q5TGJ6 251 aa16.47■□□□□ 0.23
GJB1-202ENST00000374022 MYH14Q7Z406 1995 aaKnown RBP16.47■□□□□ 0.23
GJB1-202ENST00000374022 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
GJB1-202ENST00000374022 ATP6V1AP38606 617 aa16.47■□□□□ 0.23
GJB1-202ENST00000374022 RARSP54136 660 aaKnown RBP16.47■□□□□ 0.23
GJB1-202ENST00000374022 DNAJC10Q8IXB1 793 aa16.47■□□□□ 0.23
GJB1-202ENST00000374022 NECTIN2Q92692 538 aa16.47■□□□□ 0.23
GJB1-202ENST00000374022 RREB1Q92766 1687 aa16.46■□□□□ 0.23
GJB1-202ENST00000374022 APBA3O96018 575 aa16.46■□□□□ 0.23
GJB1-202ENST00000374022 TEX13AQ9BXU3 409 aaPredicted RBP16.46■□□□□ 0.23
GJB1-202ENST00000374022 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
GJB1-202ENST00000374022 ALDH1L2Q3SY69 923 aa16.45■□□□□ 0.22
GJB1-202ENST00000374022 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
GJB1-202ENST00000374022 SSH1Q8WYL5 1049 aa16.45■□□□□ 0.22
GJB1-202ENST00000374022 CHMP4AQ9BY43 222 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 310.2 ms