RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
GJB1-202ENST00000374022 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.86
GJB1-202ENST00000374022 ABCC9O60706 1549 aa25.57■■□□□ 1.68
GJB1-202ENST00000374022 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
GJB1-202ENST00000374022 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
GJB1-202ENST00000374022 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
GJB1-202ENST00000374022 NACADO15069 1562 aa24.93■■□□□ 1.58
GJB1-202ENST00000374022 MYO15BQ96JP2 1530 aa24.92■■□□□ 1.58
GJB1-202ENST00000374022 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
GJB1-202ENST00000374022 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.5
GJB1-202ENST00000374022 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
GJB1-202ENST00000374022 SHROOM4Q9ULL8 1493 aa24.18■■□□□ 1.46
GJB1-202ENST00000374022 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
GJB1-202ENST00000374022 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
GJB1-202ENST00000374022 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
GJB1-202ENST00000374022 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
GJB1-202ENST00000374022 BAZ1AQ9NRL2 1556 aaPredicted RBP23.39■■□□□ 1.34
GJB1-202ENST00000374022 SMARCA4P51532 1647 aa23.38■■□□□ 1.33
GJB1-202ENST00000374022 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
GJB1-202ENST00000374022 RSF1Q96T23 1441 aaPredicted RBP23.2■■□□□ 1.3
GJB1-202ENST00000374022 CC2D2AQ9P2K1 1620 aa23.18■■□□□ 1.3
GJB1-202ENST00000374022 WIZO95785 1651 aa23.13■■□□□ 1.29
GJB1-202ENST00000374022 PEG3Q9GZU2 1588 aa23.12■■□□□ 1.29
GJB1-202ENST00000374022 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
GJB1-202ENST00000374022 ATAD2BQ9ULI0 1458 aa23.06■■□□□ 1.28
GJB1-202ENST00000374022 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
GJB1-202ENST00000374022 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
GJB1-202ENST00000374022 DNAJC5BQ9UF47 199 aa22.95■■□□□ 1.26
GJB1-202ENST00000374022 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
GJB1-202ENST00000374022 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
GJB1-202ENST00000374022 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
GJB1-202ENST00000374022 CCDC88BA6NC98 1476 aa22.58■■□□□ 1.21
GJB1-202ENST00000374022 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
GJB1-202ENST00000374022 LAMC3Q9Y6N6 1575 aa22.32■■□□□ 1.16
GJB1-202ENST00000374022 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
GJB1-202ENST00000374022 CFTRP13569 1480 aa22.31■■□□□ 1.16
GJB1-202ENST00000374022 NESP48681 1621 aa22.29■■□□□ 1.16
GJB1-202ENST00000374022 KIF21AQ7Z4S6 1674 aa22.12■■□□□ 1.13
GJB1-202ENST00000374022 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
GJB1-202ENST00000374022 FANCD2Q9BXW9 1451 aa22.08■■□□□ 1.13
GJB1-202ENST00000374022 CEP164Q9UPV0 1460 aa22.02■■□□□ 1.12
GJB1-202ENST00000374022 ERCC6Q03468 1493 aa22■■□□□ 1.11
GJB1-202ENST00000374022 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
GJB1-202ENST00000374022 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
GJB1-202ENST00000374022 THOC2Q8NI27 1593 aaKnown RBP21.88■■□□□ 1.09
GJB1-202ENST00000374022 WRNQ14191 1432 aaPredicted RBP eCLIP21.87■■□□□ 1.09
GJB1-202ENST00000374022 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
GJB1-202ENST00000374022 CUX1P39880 1505 aa21.84■■□□□ 1.09
GJB1-202ENST00000374022 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
GJB1-202ENST00000374022 SYNJ1O43426 1573 aa21.83■■□□□ 1.09
GJB1-202ENST00000374022 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
GJB1-202ENST00000374022 WDR62O43379 1518 aa21.81■■□□□ 1.08
GJB1-202ENST00000374022 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
GJB1-202ENST00000374022 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
GJB1-202ENST00000374022 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
GJB1-202ENST00000374022 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
GJB1-202ENST00000374022 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
GJB1-202ENST00000374022 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
GJB1-202ENST00000374022 CUX2O14529 1486 aa21.57■■□□□ 1.04
GJB1-202ENST00000374022 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
GJB1-202ENST00000374022 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
GJB1-202ENST00000374022 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
GJB1-202ENST00000374022 SOGA1O94964 1423 aa21.54■■□□□ 1.04
GJB1-202ENST00000374022 IFT140Q96RY7 1462 aa21.52■■□□□ 1.03
GJB1-202ENST00000374022 ABCA10Q8WWZ4 1543 aa21.48■■□□□ 1.03
GJB1-202ENST00000374022 ABCA5Q8WWZ7 1642 aa21.4■■□□□ 1.02
GJB1-202ENST00000374022 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.02
GJB1-202ENST00000374022 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
GJB1-202ENST00000374022 KIF27Q86VH2 1401 aa21.36■■□□□ 1.01
GJB1-202ENST00000374022 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
GJB1-202ENST00000374022 RUSC2Q8N2Y8 1516 aa21.35■■□□□ 1.01
GJB1-202ENST00000374022 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
GJB1-202ENST00000374022 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
GJB1-202ENST00000374022 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
GJB1-202ENST00000374022 EEA1Q15075 1411 aa21.29■■□□□ 1
GJB1-202ENST00000374022 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
GJB1-202ENST00000374022 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
GJB1-202ENST00000374022 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
GJB1-202ENST00000374022 CUL7Q14999 1698 aa21.2■□□□□ 0.98
GJB1-202ENST00000374022 IGF1RP08069 1367 aa21.18■□□□□ 0.98
GJB1-202ENST00000374022 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
GJB1-202ENST00000374022 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
GJB1-202ENST00000374022 ADAMTS12P58397 1594 aa21.15■□□□□ 0.98
GJB1-202ENST00000374022 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
GJB1-202ENST00000374022 KIF21BO75037 1637 aa21.09■□□□□ 0.97
GJB1-202ENST00000374022 PRXQ9BXM0 1461 aa21.09■□□□□ 0.97
GJB1-202ENST00000374022 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.97
GJB1-202ENST00000374022 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.97
GJB1-202ENST00000374022 CHD1O14646 1710 aa21.05■□□□□ 0.96
GJB1-202ENST00000374022 SYNJ2O15056 1496 aa21.05■□□□□ 0.96
GJB1-202ENST00000374022 RAPGEF2Q9Y4G8 1499 aa21.03■□□□□ 0.96
GJB1-202ENST00000374022 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
GJB1-202ENST00000374022 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
GJB1-202ENST00000374022 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
GJB1-202ENST00000374022 FBLN2P98095 1184 aa20.94■□□□□ 0.94
GJB1-202ENST00000374022 EHMT2Q96KQ7 1210 aa20.93■□□□□ 0.94
GJB1-202ENST00000374022 CTTNBP2Q8WZ74 1663 aa20.92■□□□□ 0.94
GJB1-202ENST00000374022 CEP170Q5SW79 1584 aa20.88■□□□□ 0.93
GJB1-202ENST00000374022 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
GJB1-202ENST00000374022 NUP160Q12769 1436 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms