RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
SRPK1-204ENST00000373825 EVCP57679 992 aa18■□□□□ 0.47
SRPK1-204ENST00000373825 JRKLQ9Y4A0 524 aa18■□□□□ 0.47
SRPK1-204ENST00000373825 RAI14Q9P0K7 980 aa18■□□□□ 0.47
SRPK1-204ENST00000373825 PPFIBP1Q86W92 1011 aa18■□□□□ 0.47
SRPK1-204ENST00000373825 CUX1P39880 1505 aa18■□□□□ 0.47
SRPK1-204ENST00000373825 PSMA5P28066 241 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 PPM1EQ8WY54 764 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 DDX19AQ9NUU7 478 aaKnown RBP17.99■□□□□ 0.47
SRPK1-204ENST00000373825 GOLIM4O00461 696 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 ATP6V1AP38606 617 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 RRP12Q5JTH9 1297 aaKnown RBP17.99■□□□□ 0.47
SRPK1-204ENST00000373825 FYCO1Q9BQS8 1478 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 EBAG9O00559 213 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 TOP1P11387 765 aaKnown RBP17.99■□□□□ 0.47
SRPK1-204ENST00000373825 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 CNPY4Q8N129 248 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 CPLX3Q8WVH0 158 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
SRPK1-204ENST00000373825 LIMCH1Q9UPQ0 1083 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 ERBINQ96RT1 1412 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 PPFIA3O75145 1194 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 TTC22Q5TAA0 569 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 CARD6Q9BX69 1037 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 CFAP45Q9UL16 551 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 NAA25Q14CX7 972 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 ODF2Q5BJF6 829 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 SIL1Q9H173 461 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 EFCC1Q9HA90 598 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 HSP90AA4PQ58FG1 418 aa17.98■□□□□ 0.47
SRPK1-204ENST00000373825 DNAJC21Q5F1R6 531 aaKnown RBP17.98■□□□□ 0.47
SRPK1-204ENST00000373825 HOOK1Q9UJC3 728 aaKnown RBP17.98■□□□□ 0.47
SRPK1-204ENST00000373825 RAD51AP2Q09MP3 1159 aa17.97■□□□□ 0.47
SRPK1-204ENST00000373825 NSFL1CQ9UNZ2 370 aaKnown RBP17.97■□□□□ 0.47
SRPK1-204ENST00000373825 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
SRPK1-204ENST00000373825 EIF2S2P20042 333 aaKnown RBP17.97■□□□□ 0.47
SRPK1-204ENST00000373825 NCBP1Q09161 790 aaKnown RBP17.97■□□□□ 0.47
SRPK1-204ENST00000373825 NEBLO76041 1014 aa17.97■□□□□ 0.47
SRPK1-204ENST00000373825 SSBP05455 408 aaKnown RBP eCLIP17.97■□□□□ 0.47
SRPK1-204ENST00000373825 PPP2R5AQ15172 486 aa17.96■□□□□ 0.47
SRPK1-204ENST00000373825 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
SRPK1-204ENST00000373825 SMC1AQ14683 1233 aaKnown RBP17.96■□□□□ 0.47
SRPK1-204ENST00000373825 ICE2Q659A1 982 aa17.96■□□□□ 0.47
SRPK1-204ENST00000373825 ZNF396Q96N95 335 aaPredicted RBP17.96■□□□□ 0.47
SRPK1-204ENST00000373825 PUF60Q9UHX1 559 aaKnown RBP17.96■□□□□ 0.47
SRPK1-204ENST00000373825 RRP15Q9Y3B9 282 aaKnown RBP17.96■□□□□ 0.47
SRPK1-204ENST00000373825 KIAA1107Q9UPP5 1409 aa17.96■□□□□ 0.47
SRPK1-204ENST00000373825 MYO1CO00159 1063 aa17.96■□□□□ 0.47
SRPK1-204ENST00000373825 NECAB1Q8N987 351 aa17.96■□□□□ 0.47
SRPK1-204ENST00000373825 CBFA2T2O43439 604 aa17.96■□□□□ 0.46
SRPK1-204ENST00000373825 KIF5CO60282 957 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 KIAA1524Q8TCG1 905 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 BLOC1S2Q6QNY1 142 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 GUCY1B3Q02153 619 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 LRCH2Q5VUJ6 765 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 PRPF40BQ6NWY9 871 aaKnown RBP17.95■□□□□ 0.46
SRPK1-204ENST00000373825 RPAINQ86UA6 219 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 SRCIN1Q9C0H9 1055 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 DDX41Q9UJV9 622 aaKnown RBP17.95■□□□□ 0.46
SRPK1-204ENST00000373825 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
SRPK1-204ENST00000373825 RHOXF2BP0C7M4 288 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 RHOXF2Q9BQY4 288 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 CFAP70Q5T0N1 1121 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 PARD3Q8TEW0 1356 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
SRPK1-204ENST00000373825 NBPF11Q86T75 865 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 AOPEPQ8N6M6 819 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 FSD1Q9BTV5 496 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 ST7Q9NRC1 585 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 EPB41L2O43491 1005 aaKnown RBP17.94■□□□□ 0.46
SRPK1-204ENST00000373825 TEX2Q8IWB9 1127 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 SMARCE1Q969G3 411 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 USP26Q9BXU7 913 aa17.94■□□□□ 0.46
SRPK1-204ENST00000373825 OTUD6BQ8N6M0 293 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 NRBP1Q9UHY1 535 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 SPG7Q9UQ90 795 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 PCF11O94913 1555 aaKnown RBP17.93■□□□□ 0.46
SRPK1-204ENST00000373825 GOLGA6L10A6NI86 522 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 F13A1P00488 732 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 UBTFL1P0CB47 393 aaPredicted RBP17.93■□□□□ 0.46
SRPK1-204ENST00000373825 SSR1P43307 286 aaKnown RBP17.93■□□□□ 0.46
SRPK1-204ENST00000373825 STX1AQ16623 288 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 FAM173BQ6P4H8 233 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 ZSCAN31Q96LW9 406 aaPredicted RBP17.93■□□□□ 0.46
SRPK1-204ENST00000373825 SCLT1Q96NL6 688 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 GPRASP1Q5JY77 1395 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 ZNF622Q969S3 477 aaKnown RBP eCLIP17.93■□□□□ 0.465e-8■■□□□ 12.2
SRPK1-204ENST00000373825 ZNF428Q96B54 188 aa17.93■□□□□ 0.46
SRPK1-204ENST00000373825 TRIM29Q14134 588 aa17.92■□□□□ 0.46
SRPK1-204ENST00000373825 RPAP2Q8IXW5 612 aaPredicted RBP17.92■□□□□ 0.46
SRPK1-204ENST00000373825 GNAI2P04899 355 aa17.92■□□□□ 0.46
SRPK1-204ENST00000373825 ZSCAN25Q6NSZ9 544 aa17.92■□□□□ 0.46
SRPK1-204ENST00000373825 PDLIM2Q96JY6 352 aa17.92■□□□□ 0.46
SRPK1-204ENST00000373825 LIG3P49916 1009 aa17.92■□□□□ 0.46
SRPK1-204ENST00000373825 FBXO38Q6PIJ6 1188 aa17.92■□□□□ 0.46
SRPK1-204ENST00000373825 C9orf78Q9NZ63 289 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms