RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 TSPYL4Q9UJ04 414 aa22■■□□□ 1.11
HNF4A-203ENST00000372920 FOXO3O43524 673 aa21.99■■□□□ 1.11
HNF4A-203ENST00000372920 MX1P20591 662 aa21.99■■□□□ 1.11
HNF4A-203ENST00000372920 LRRCC1Q9C099 1032 aa21.99■■□□□ 1.11
HNF4A-203ENST00000372920 SPATA31D1Q6ZQQ2 1576 aa21.99■■□□□ 1.11
HNF4A-203ENST00000372920 ITSN1Q15811 1721 aa21.99■■□□□ 1.11
HNF4A-203ENST00000372920 ANO2Q9NQ90 1003 aa21.98■■□□□ 1.11
HNF4A-203ENST00000372920 CCDC39Q9UFE4 941 aa21.98■■□□□ 1.11
HNF4A-203ENST00000372920 CHMLP26374 656 aa21.98■■□□□ 1.11
HNF4A-203ENST00000372920 MCM5P33992 734 aa21.98■■□□□ 1.11
HNF4A-203ENST00000372920 INTS4Q96HW7 963 aaKnown RBP21.98■■□□□ 1.11
HNF4A-203ENST00000372920 ANAPC15P60006 121 aa21.98■■□□□ 1.11
HNF4A-203ENST00000372920 RBM10P98175 930 aaKnown RBP21.98■■□□□ 1.11
HNF4A-203ENST00000372920 SIRT1Q96EB6 747 aa21.98■■□□□ 1.11
HNF4A-203ENST00000372920 RILPL2Q969X0 211 aa21.97■■□□□ 1.11
HNF4A-203ENST00000372920 TRIM6-TRIM34B2RNG4 842 aa21.96■■□□□ 1.11
HNF4A-203ENST00000372920 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
HNF4A-203ENST00000372920 OVOS2A0A0J9YW53 1432 aa21.96■■□□□ 1.11
HNF4A-203ENST00000372920 OVOS2Q6IE36 1432 aa21.96■■□□□ 1.11
HNF4A-203ENST00000372920 MTHFSDQ2M296 383 aaKnown RBP21.96■■□□□ 1.11
HNF4A-203ENST00000372920 PNMA6EA0A0J9YXQ4 647 aa21.96■■□□□ 1.11
HNF4A-203ENST00000372920 TECPR2O15040 1411 aa21.95■■□□□ 1.11
HNF4A-203ENST00000372920 RTF1Q92541 710 aaKnown RBP21.95■■□□□ 1.1
HNF4A-203ENST00000372920 SOX12O15370 315 aa21.95■■□□□ 1.1
HNF4A-203ENST00000372920 PKNOX2Q96KN3 472 aa21.95■■□□□ 1.1
HNF4A-203ENST00000372920 TSPY26PQ9H489 355 aa21.95■■□□□ 1.1
HNF4A-203ENST00000372920 MAP3K19Q56UN5 1328 aa21.95■■□□□ 1.1
HNF4A-203ENST00000372920 ACEP12821 1306 aa21.94■■□□□ 1.1
HNF4A-203ENST00000372920 PEAK1Q9H792 1746 aa21.94■■□□□ 1.1
HNF4A-203ENST00000372920 CSPP1Q1MSJ5 1256 aa21.94■■□□□ 1.1
HNF4A-203ENST00000372920 UPF3BQ9BZI7 483 aaKnown RBP21.94■■□□□ 1.1
HNF4A-203ENST00000372920 RGPD1P0DJD0 1748 aa21.93■■□□□ 1.1
HNF4A-203ENST00000372920 FOXD4L6Q3SYB3 417 aaPredicted RBP21.93■■□□□ 1.1
HNF4A-203ENST00000372920 FOXD4L3Q6VB84 417 aaPredicted RBP21.93■■□□□ 1.1
HNF4A-203ENST00000372920 UQCRHLA0A096LP55 91 aa21.93■■□□□ 1.1
HNF4A-203ENST00000372920 UQCRHP07919 91 aa21.93■■□□□ 1.1
HNF4A-203ENST00000372920 ATP8B2P98198 1209 aa21.93■■□□□ 1.1
HNF4A-203ENST00000372920 STK31Q9BXU1 1019 aa21.93■■□□□ 1.1
HNF4A-203ENST00000372920 UNC5CLQ8IV45 518 aa21.93■■□□□ 1.1
HNF4A-203ENST00000372920 SYAP1Q96A49 352 aaPredicted RBP21.93■■□□□ 1.1
HNF4A-203ENST00000372920 SSH2Q76I76 1423 aa21.92■■□□□ 1.1
HNF4A-203ENST00000372920 GNAI3P08754 354 aa21.92■■□□□ 1.1
HNF4A-203ENST00000372920 MLECQ14165 292 aa21.92■■□□□ 1.1
HNF4A-203ENST00000372920 GDPD2Q9HCC8 539 aa21.92■■□□□ 1.1
HNF4A-203ENST00000372920 STAP2Q9UGK3 403 aa21.92■■□□□ 1.1
HNF4A-203ENST00000372920 FAM13BQ9NYF5 915 aa21.92■■□□□ 1.1
HNF4A-203ENST00000372920 GADD45BO75293 160 aaPredicted RBP21.91■■□□□ 1.1
HNF4A-203ENST00000372920 FLIIQ13045 1269 aa21.91■■□□□ 1.1
HNF4A-203ENST00000372920 IL17RAQ96F46 866 aa21.91■■□□□ 1.1
HNF4A-203ENST00000372920 ARHGEF10O15013 1369 aa21.91■■□□□ 1.1
HNF4A-203ENST00000372920 NUTM2FA1L443 756 aa21.91■■□□□ 1.1
HNF4A-203ENST00000372920 FKBP5Q13451 457 aaPredicted RBP21.91■■□□□ 1.1
HNF4A-203ENST00000372920 TUBGCP6Q96RT7 1819 aa21.91■■□□□ 1.1
HNF4A-203ENST00000372920 ROBO2Q9HCK4 1378 aa21.9■■□□□ 1.1
HNF4A-203ENST00000372920 SRCIN1Q9C0H9 1055 aa21.9■■□□□ 1.1
HNF4A-203ENST00000372920 IL25Q9H293 177 aa21.9■■□□□ 1.1
HNF4A-203ENST00000372920 AGLP35573 1532 aa21.89■■□□□ 1.1
HNF4A-203ENST00000372920 USP31Q70CQ4 1352 aa21.89■■□□□ 1.1
HNF4A-203ENST00000372920 USP48Q86UV5 1035 aa21.89■■□□□ 1.1
HNF4A-203ENST00000372920 LRRFIP2Q9Y608 721 aaKnown RBP21.89■■□□□ 1.09
HNF4A-203ENST00000372920 PTMAP06454 111 aaKnown RBP21.88■■□□□ 1.09
HNF4A-203ENST00000372920 USP6P35125 1406 aa21.88■■□□□ 1.09
HNF4A-203ENST00000372920 NECTIN2Q92692 538 aa21.88■■□□□ 1.09
HNF4A-203ENST00000372920 WDR33Q9C0J8 1336 aaKnown RBP21.88■■□□□ 1.09
HNF4A-203ENST00000372920 PLEKHG3A1L390 1219 aa21.88■■□□□ 1.09
HNF4A-203ENST00000372920 PHF14O94880 888 aa21.87■■□□□ 1.09
HNF4A-203ENST00000372920 RIMS1Q86UR5 1692 aaKnown RBP21.87■■□□□ 1.09
HNF4A-203ENST00000372920 CCDC30Q5VVM6 783 aa21.86■■□□□ 1.09
HNF4A-203ENST00000372920 HSPA4P34932 840 aa21.86■■□□□ 1.09
HNF4A-203ENST00000372920 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.86■■□□□ 1.09
HNF4A-203ENST00000372920 MAP7D2Q96T17 732 aa21.86■■□□□ 1.09
HNF4A-203ENST00000372920 IL1RAPL2Q9NP60 686 aa21.86■■□□□ 1.09
HNF4A-203ENST00000372920 SASS6Q6UVJ0 657 aa21.85■■□□□ 1.09
HNF4A-203ENST00000372920 NALCNQ8IZF0 1738 aa21.85■■□□□ 1.09
HNF4A-203ENST00000372920 AOX1Q06278 1338 aa21.84■■□□□ 1.09
HNF4A-203ENST00000372920 KDRP35968 1356 aa21.84■■□□□ 1.09
HNF4A-203ENST00000372920 DYNC1I1O14576 645 aa21.84■■□□□ 1.09
HNF4A-203ENST00000372920 KIAA2012Q0VF49 1180 aa21.84■■□□□ 1.09
HNF4A-203ENST00000372920 RPAP1Q9BWH6 1393 aaPredicted RBP21.84■■□□□ 1.09
HNF4A-203ENST00000372920 PLEKHG5O94827 1062 aa21.83■■□□□ 1.09
HNF4A-203ENST00000372920 HDGFP51858 240 aaKnown RBP21.83■■□□□ 1.09
HNF4A-203ENST00000372920 NUTM1Q86Y26 1132 aa21.83■■□□□ 1.09
HNF4A-203ENST00000372920 USP44Q9H0E7 712 aa21.83■■□□□ 1.09
HNF4A-203ENST00000372920 EYA1Q99502 592 aa21.83■■□□□ 1.09
HNF4A-203ENST00000372920 EPB41L2O43491 1005 aaKnown RBP21.83■■□□□ 1.08
HNF4A-203ENST00000372920 MAP4K4O95819 1239 aaPredicted RBP21.82■■□□□ 1.08
HNF4A-203ENST00000372920 TMEM87AQ8NBN3 555 aa21.82■■□□□ 1.08
HNF4A-203ENST00000372920 SOS1Q07889 1333 aaPredicted RBP21.82■■□□□ 1.08
HNF4A-203ENST00000372920 XRN1Q8IZH2 1706 aaKnown RBP21.82■■□□□ 1.08
HNF4A-203ENST00000372920 FAM184AQ8NB25 1140 aa21.82■■□□□ 1.08
HNF4A-203ENST00000372920 FLT4P35916 1363 aa21.81■■□□□ 1.08
HNF4A-203ENST00000372920 UBTFL1P0CB47 393 aaPredicted RBP21.81■■□□□ 1.08
HNF4A-203ENST00000372920 CEP170BQ9Y4F5 1589 aaPredicted RBP21.81■■□□□ 1.08
HNF4A-203ENST00000372920 CNPY2Q9Y2B0 182 aa21.81■■□□□ 1.08
HNF4A-203ENST00000372920 SBNO1A3KN83 1393 aa21.81■■□□□ 1.08
HNF4A-203ENST00000372920 TOPAZ1Q8N9V7 1692 aa21.81■■□□□ 1.08
HNF4A-203ENST00000372920 IGSF1Q8N6C5 1336 aa21.8■■□□□ 1.08
HNF4A-203ENST00000372920 UVSSAQ2YD98 709 aa21.8■■□□□ 1.08
HNF4A-203ENST00000372920 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.8■■□□□ 1.08
HNF4A-203ENST00000372920 CCDC183Q5T5S1 534 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms