RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 KDM6AO15550 1401 aaPredicted RBP11.46□□□□□ -0.57
YIPF3-201ENST00000372417 GLTPD2A6NH11 291 aa11.46□□□□□ -0.57
YIPF3-201ENST00000372417 MPRIPQ6WCQ1 1025 aa11.46□□□□□ -0.57
YIPF3-201ENST00000372417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.57
YIPF3-201ENST00000372417 GNPATO15228 680 aa11.45□□□□□ -0.58
YIPF3-201ENST00000372417 HSPA8P11142 646 aaKnown RBP11.45□□□□□ -0.58
YIPF3-201ENST00000372417 KCNA3P22001 575 aa11.45□□□□□ -0.58
YIPF3-201ENST00000372417 IP6K1Q92551 441 aa11.45□□□□□ -0.58
YIPF3-201ENST00000372417 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
YIPF3-201ENST00000372417 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
YIPF3-201ENST00000372417 NBPF1Q3BBV0 1214 aa11.44□□□□□ -0.58
YIPF3-201ENST00000372417 NLGN1Q8N2Q7 840 aa11.44□□□□□ -0.58
YIPF3-201ENST00000372417 LINC00116Q8NCU8 138 aa11.44□□□□□ -0.58
YIPF3-201ENST00000372417 CASP8AP2Q9UKL3 1982 aa11.44□□□□□ -0.58
YIPF3-201ENST00000372417 SCN4AP35499 1836 aa11.44□□□□□ -0.58
YIPF3-201ENST00000372417 ZNF831Q5JPB2 1677 aa11.43□□□□□ -0.58
YIPF3-201ENST00000372417 MYH14Q7Z406 1995 aaKnown RBP11.43□□□□□ -0.58
YIPF3-201ENST00000372417 CGNL1Q0VF96 1302 aa11.43□□□□□ -0.58
YIPF3-201ENST00000372417 TMF1P82094 1093 aa11.43□□□□□ -0.58
YIPF3-201ENST00000372417 RASSF7Q02833 373 aa11.43□□□□□ -0.58
YIPF3-201ENST00000372417 NME9Q86XW9 330 aa11.43□□□□□ -0.58
YIPF3-201ENST00000372417 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
YIPF3-201ENST00000372417 VEGFBP49765 207 aa11.42□□□□□ -0.58
YIPF3-201ENST00000372417 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
YIPF3-201ENST00000372417 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
YIPF3-201ENST00000372417 FER1L6Q2WGJ9 1857 aa11.42□□□□□ -0.58
YIPF3-201ENST00000372417 THSD7BQ9C0I4 1608 aa11.42□□□□□ -0.58
YIPF3-201ENST00000372417 PCDH11XQ9BZA7 1347 aa11.41□□□□□ -0.58
YIPF3-201ENST00000372417 PCDH11YQ9BZA8 1340 aa11.41□□□□□ -0.58
YIPF3-201ENST00000372417 LOC102724428A0A0B4J2F2 783 aa11.41□□□□□ -0.58
YIPF3-201ENST00000372417 LMNB1P20700 586 aa11.41□□□□□ -0.58
YIPF3-201ENST00000372417 SIK1P57059 783 aa11.41□□□□□ -0.58
YIPF3-201ENST00000372417 CACNA1SQ13698 1873 aa11.4□□□□□ -0.58
YIPF3-201ENST00000372417 POTECB2RU33 542 aa11.4□□□□□ -0.58
YIPF3-201ENST00000372417 SBNO2Q9Y2G9 1366 aa11.4□□□□□ -0.59
YIPF3-201ENST00000372417 CD163L1Q9NR16 1453 aa11.39□□□□□ -0.59
YIPF3-201ENST00000372417 TRAPPC3LQ5T215 181 aa11.39□□□□□ -0.59
YIPF3-201ENST00000372417 RAPGEF4Q8WZA2 1011 aa11.39□□□□□ -0.59
YIPF3-201ENST00000372417 TRPM7Q96QT4 1865 aa11.38□□□□□ -0.59
YIPF3-201ENST00000372417 GYS1P13807 737 aa11.38□□□□□ -0.59
YIPF3-201ENST00000372417 TATP17735 454 aaPredicted RBP11.38□□□□□ -0.59
YIPF3-201ENST00000372417 MAP2K1Q02750 393 aaPredicted RBP11.38□□□□□ -0.59
YIPF3-201ENST00000372417 ITPK1Q13572 414 aa11.38□□□□□ -0.59
YIPF3-201ENST00000372417 RTCBQ9Y3I0 505 aaKnown RBP11.38□□□□□ -0.59
YIPF3-201ENST00000372417 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
YIPF3-201ENST00000372417 TMEM88BA6NKF7 163 aa11.37□□□□□ -0.59
YIPF3-201ENST00000372417 CHRNA5P30532 468 aa11.37□□□□□ -0.59
YIPF3-201ENST00000372417 HOXC9P31274 260 aa11.37□□□□□ -0.59
YIPF3-201ENST00000372417 ATP6V1AP38606 617 aa11.37□□□□□ -0.59
YIPF3-201ENST00000372417 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
YIPF3-201ENST00000372417 PIGBQ92521 554 aa11.37□□□□□ -0.59
YIPF3-201ENST00000372417 PASKQ96RG2 1323 aa11.36□□□□□ -0.59
YIPF3-201ENST00000372417 ADRA2BP18089 450 aa11.36□□□□□ -0.59
YIPF3-201ENST00000372417 AMPHP49418 695 aa11.36□□□□□ -0.59
YIPF3-201ENST00000372417 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
YIPF3-201ENST00000372417 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
YIPF3-201ENST00000372417 LTBP1Q14766 1721 aa11.35□□□□□ -0.59
YIPF3-201ENST00000372417 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
YIPF3-201ENST00000372417 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
YIPF3-201ENST00000372417 RFC4P35249 363 aa11.35□□□□□ -0.59
YIPF3-201ENST00000372417 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
YIPF3-201ENST00000372417 NRXN2Q9P2S2 1712 aa11.35□□□□□ -0.59
YIPF3-201ENST00000372417 MAP3K19Q56UN5 1328 aa11.35□□□□□ -0.59
YIPF3-201ENST00000372417 ADAMTSL1Q8N6G6 1762 aa11.34□□□□□ -0.59
YIPF3-201ENST00000372417 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
YIPF3-201ENST00000372417 CYP27B1O15528 508 aa11.34□□□□□ -0.59
YIPF3-201ENST00000372417 NBPF6Q5VWK0 638 aa11.34□□□□□ -0.59
YIPF3-201ENST00000372417 NBPF4Q96M43 638 aa11.34□□□□□ -0.59
YIPF3-201ENST00000372417 WDR33Q9C0J8 1336 aaKnown RBP11.34□□□□□ -0.59
YIPF3-201ENST00000372417 DEFB115Q30KQ5 88 aa11.33□□□□□ -0.6
YIPF3-201ENST00000372417 HDGFL2Q7Z4V5 671 aaPredicted RBP11.33□□□□□ -0.6
YIPF3-201ENST00000372417 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
YIPF3-201ENST00000372417 RASSF10A6NK89 507 aa11.32□□□□□ -0.6
YIPF3-201ENST00000372417 PRPF38BQ5VTL8 546 aaKnown RBP11.32□□□□□ -0.6
YIPF3-201ENST00000372417 LDHDQ86WU2 507 aa11.32□□□□□ -0.6
YIPF3-201ENST00000372417 MCOLN1Q9GZU1 580 aa11.32□□□□□ -0.6
YIPF3-201ENST00000372417 TMOD3Q9NYL9 352 aa11.32□□□□□ -0.6
YIPF3-201ENST00000372417 ASAP1Q9ULH1 1129 aa11.32□□□□□ -0.6
YIPF3-201ENST00000372417 ARFGEF2Q9Y6D5 1785 aa11.31□□□□□ -0.6
YIPF3-201ENST00000372417 KDRP35968 1356 aa11.31□□□□□ -0.6
YIPF3-201ENST00000372417 RAB3GAP2Q9H2M9 1393 aa11.31□□□□□ -0.6
YIPF3-201ENST00000372417 ADAMTS7Q9UKP4 1686 aa11.31□□□□□ -0.6
YIPF3-201ENST00000372417 DDR1Q08345 913 aa11.31□□□□□ -0.6
YIPF3-201ENST00000372417 ANKRD31Q8N7Z5 1873 aa11.31□□□□□ -0.6
YIPF3-201ENST00000372417 CNTNAP4Q9C0A0 1308 aa11.31□□□□□ -0.6
YIPF3-201ENST00000372417 NFKBIEO00221 500 aa11.3□□□□□ -0.6
YIPF3-201ENST00000372417 RC3H1Q5TC82 1133 aaKnown RBP11.3□□□□□ -0.6
YIPF3-201ENST00000372417 A0A1W2PP64 1363 aa11.29□□□□□ -0.6
YIPF3-201ENST00000372417 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
YIPF3-201ENST00000372417 TJP1Q07157 1748 aa11.29□□□□□ -0.6
YIPF3-201ENST00000372417 IQCA1LA6NCM1 817 aa11.29□□□□□ -0.6
YIPF3-201ENST00000372417 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
YIPF3-201ENST00000372417 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
YIPF3-201ENST00000372417 ERFEQ4G0M1 354 aa11.29□□□□□ -0.6
YIPF3-201ENST00000372417 TMC1Q8TDI8 760 aa11.29□□□□□ -0.6
YIPF3-201ENST00000372417 KIF20BQ96Q89 1820 aa11.29□□□□□ -0.6
YIPF3-201ENST00000372417 ITGBL1O95965 494 aaPredicted RBP11.28□□□□□ -0.6
YIPF3-201ENST00000372417 FKBP8Q14318 412 aa11.28□□□□□ -0.6
YIPF3-201ENST00000372417 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
YIPF3-201ENST00000372417 COG3Q96JB2 828 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms