RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 SYTL4Q96C24 671 aaPredicted RBP22.97■■□□□ 1.27
VPS37B-202ENST00000371248 PRIM1P49642 420 aaKnown RBP22.96■■□□□ 1.27
VPS37B-202ENST00000371248 GNAI1P63096 354 aa22.96■■□□□ 1.27
VPS37B-202ENST00000371248 CFAP44Q96MT7 982 aa22.96■■□□□ 1.27
VPS37B-202ENST00000371248 IFT57Q9NWB7 429 aa22.96■■□□□ 1.27
VPS37B-202ENST00000371248 MIS18AQ9NYP9 233 aa22.96■■□□□ 1.27
VPS37B-202ENST00000371248 GTF3C3Q9Y5Q9 886 aa22.96■■□□□ 1.27
VPS37B-202ENST00000371248 SBF2Q86WG5 1849 aa22.96■■□□□ 1.27
VPS37B-202ENST00000371248 MRC1P22897 1456 aa22.96■■□□□ 1.27
VPS37B-202ENST00000371248 TMOD3Q9NYL9 352 aa22.95■■□□□ 1.26
VPS37B-202ENST00000371248 ZNF853P0CG23 659 aa22.94■■□□□ 1.26
VPS37B-202ENST00000371248 SLFN5Q08AF3 891 aa22.94■■□□□ 1.26
VPS37B-202ENST00000371248 FAM196AQ6ZSG2 479 aa22.94■■□□□ 1.26
VPS37B-202ENST00000371248 BCL9O00512 1426 aa22.94■■□□□ 1.26
VPS37B-202ENST00000371248 BTBD11A6QL63 1104 aa22.94■■□□□ 1.26
VPS37B-202ENST00000371248 E9PSI1 815 aa22.94■■□□□ 1.26
VPS37B-202ENST00000371248 CHL1O00533 1208 aa22.93■■□□□ 1.26
VPS37B-202ENST00000371248 KCNQ2O43526 872 aa22.93■■□□□ 1.26
VPS37B-202ENST00000371248 EP400Q96L91 3159 aa22.93■■□□□ 1.26
VPS37B-202ENST00000371248 PIGBQ92521 554 aa22.93■■□□□ 1.26
VPS37B-202ENST00000371248 TSR2Q969E8 191 aaKnown RBP22.93■■□□□ 1.26
VPS37B-202ENST00000371248 TSPYL4Q9UJ04 414 aa22.93■■□□□ 1.26
VPS37B-202ENST00000371248 MYH16Q9H6N6 1097 aa22.92■■□□□ 1.26
VPS37B-202ENST00000371248 MBIPQ9NS73 344 aa22.92■■□□□ 1.26
VPS37B-202ENST00000371248 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
VPS37B-202ENST00000371248 BABAM1Q9NWV8 329 aa22.91■■□□□ 1.26
VPS37B-202ENST00000371248 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
VPS37B-202ENST00000371248 SLC39A6Q13433 755 aa22.9■■□□□ 1.26
VPS37B-202ENST00000371248 PTF1AQ7RTS3 328 aa22.89■■□□□ 1.25
VPS37B-202ENST00000371248 TRMT2AQ8IZ69 625 aaKnown RBP22.89■■□□□ 1.25
VPS37B-202ENST00000371248 FANCIQ9NVI1 1328 aa22.89■■□□□ 1.25
VPS37B-202ENST00000371248 KCNQ3O43525 872 aa22.88■■□□□ 1.25
VPS37B-202ENST00000371248 DUSP27Q5VZP5 1158 aa22.88■■□□□ 1.25
VPS37B-202ENST00000371248 CENPBP07199 599 aaPredicted RBP22.88■■□□□ 1.25
VPS37B-202ENST00000371248 ZNF790Q6PG37 636 aa22.87■■□□□ 1.25
VPS37B-202ENST00000371248 ASAP1Q9ULH1 1129 aa22.86■■□□□ 1.25
VPS37B-202ENST00000371248 BTAF1O14981 1849 aa22.86■■□□□ 1.25
VPS37B-202ENST00000371248 TRIM37O94972 964 aa22.86■■□□□ 1.25
VPS37B-202ENST00000371248 TTC5Q8N0Z6 440 aa22.86■■□□□ 1.25
VPS37B-202ENST00000371248 PAPPAQ13219 1627 aa22.85■■□□□ 1.25
VPS37B-202ENST00000371248 ATG3Q9NT62 314 aa22.85■■□□□ 1.25
VPS37B-202ENST00000371248 BCL11BQ9C0K0 894 aaPredicted RBP22.85■■□□□ 1.25
VPS37B-202ENST00000371248 EXOSC9Q06265 439 aaKnown RBP22.83■■□□□ 1.25
VPS37B-202ENST00000371248 EIF4A1P60842 406 aaKnown RBP22.83■■□□□ 1.24
VPS37B-202ENST00000371248 UBR2Q8IWV8 1755 aa22.82■■□□□ 1.24
VPS37B-202ENST00000371248 KRT24Q2M2I5 525 aa22.81■■□□□ 1.24
VPS37B-202ENST00000371248 PTCD1O75127 700 aaKnown RBP22.81■■□□□ 1.24
VPS37B-202ENST00000371248 ZNF496Q96IT1 587 aaPredicted RBP22.81■■□□□ 1.24
VPS37B-202ENST00000371248 ELL2O00472 640 aaPredicted RBP22.8■■□□□ 1.24
VPS37B-202ENST00000371248 C8orf58Q8NAV2 365 aa22.8■■□□□ 1.24
VPS37B-202ENST00000371248 BCL11AQ9H165 835 aa22.8■■□□□ 1.24
VPS37B-202ENST00000371248 SMARCC1Q92922 1105 aaPredicted RBP22.79■■□□□ 1.24
VPS37B-202ENST00000371248 FMNL2Q96PY5 1086 aa22.79■■□□□ 1.24
VPS37B-202ENST00000371248 KCPQ6ZWJ8 1503 aa22.79■■□□□ 1.24
VPS37B-202ENST00000371248 TSPYL6Q8N831 410 aa22.78■■□□□ 1.24
VPS37B-202ENST00000371248 RBM42Q9BTD8 480 aaKnown RBP22.78■■□□□ 1.24
VPS37B-202ENST00000371248 PALLDQ8WX93 1383 aa22.77■■□□□ 1.24
VPS37B-202ENST00000371248 TWISTNBQ3B726 338 aaPredicted RBP22.76■■□□□ 1.23
VPS37B-202ENST00000371248 HEG1Q9ULI3 1381 aa22.76■■□□□ 1.23
VPS37B-202ENST00000371248 TNS1Q9HBL0 1735 aaKnown RBP22.75■■□□□ 1.23
VPS37B-202ENST00000371248 GIGYF1O75420 1035 aaPredicted RBP22.75■■□□□ 1.23
VPS37B-202ENST00000371248 PRAMEF22A3QJZ6 481 aa22.74■■□□□ 1.23
VPS37B-202ENST00000371248 APBA3O96018 575 aa22.74■■□□□ 1.23
VPS37B-202ENST00000371248 C5P01031 1676 aa22.74■■□□□ 1.23
VPS37B-202ENST00000371248 SNRPA1P09661 255 aaKnown RBP22.73■■□□□ 1.23
VPS37B-202ENST00000371248 LY75O60449 1722 aa22.73■■□□□ 1.23
VPS37B-202ENST00000371248 VAMP4O75379 141 aa22.73■■□□□ 1.23
VPS37B-202ENST00000371248 SLC4A9Q96Q91 983 aa22.73■■□□□ 1.23
VPS37B-202ENST00000371248 LOC102724428A0A0B4J2F2 783 aa22.72■■□□□ 1.23
VPS37B-202ENST00000371248 SIK1P57059 783 aa22.72■■□□□ 1.23
VPS37B-202ENST00000371248 VSIG10Q8N0Z9 540 aa22.72■■□□□ 1.23
VPS37B-202ENST00000371248 ATP6V1AP38606 617 aa22.71■■□□□ 1.23
VPS37B-202ENST00000371248 HOXB7P09629 217 aa22.7■■□□□ 1.22
VPS37B-202ENST00000371248 CT47B1P0C2W7 299 aaPredicted RBP22.7■■□□□ 1.22
VPS37B-202ENST00000371248 EIF2S2P20042 333 aaKnown RBP22.7■■□□□ 1.22
VPS37B-202ENST00000371248 USP16Q9Y5T5 823 aa22.7■■□□□ 1.22
VPS37B-202ENST00000371248 SOS1Q07889 1333 aaPredicted RBP22.69■■□□□ 1.22
VPS37B-202ENST00000371248 NECTIN2Q92692 538 aa22.69■■□□□ 1.22
VPS37B-202ENST00000371248 DNAJC10Q8IXB1 793 aa22.69■■□□□ 1.22
VPS37B-202ENST00000371248 TJP1Q07157 1748 aa22.69■■□□□ 1.22
VPS37B-202ENST00000371248 LAMB4A4D0S4 1761 aa22.68■■□□□ 1.22
VPS37B-202ENST00000371248 PLSCR1O15162 318 aa22.68■■□□□ 1.22
VPS37B-202ENST00000371248 KCNQ4P56696 695 aa22.68■■□□□ 1.22
VPS37B-202ENST00000371248 SF3B2Q13435 895 aaKnown RBP22.68■■□□□ 1.22
VPS37B-202ENST00000371248 TEX13AQ9BXU3 409 aaPredicted RBP22.68■■□□□ 1.22
VPS37B-202ENST00000371248 ZNF831Q5JPB2 1677 aa22.68■■□□□ 1.22
VPS37B-202ENST00000371248 HDGFL1Q5TGJ6 251 aa22.67■■□□□ 1.22
VPS37B-202ENST00000371248 CCNL1Q9UK58 526 aaPredicted RBP22.67■■□□□ 1.22
VPS37B-202ENST00000371248 TCERG1O14776 1098 aaKnown RBP22.67■■□□□ 1.22
VPS37B-202ENST00000371248 ITPK1Q13572 414 aa22.66■■□□□ 1.22
VPS37B-202ENST00000371248 ILDR2Q71H61 639 aa22.66■■□□□ 1.22
VPS37B-202ENST00000371248 ZNF428Q96B54 188 aa22.65■■□□□ 1.22
VPS37B-202ENST00000371248 CICQ96RK0 1608 aaPredicted RBP22.64■■□□□ 1.22
VPS37B-202ENST00000371248 TAF1LQ8IZX4 1826 aa22.64■■□□□ 1.22
VPS37B-202ENST00000371248 TXNRD1Q16881 649 aa22.64■■□□□ 1.22
VPS37B-202ENST00000371248 CCDC30Q5VVM6 783 aa22.64■■□□□ 1.22
VPS37B-202ENST00000371248 RCAN3Q9UKA8 241 aa22.64■■□□□ 1.22
VPS37B-202ENST00000371248 STARD3NLO95772 234 aa22.64■■□□□ 1.21
VPS37B-202ENST00000371248 RARSP54136 660 aaKnown RBP22.64■■□□□ 1.21
VPS37B-202ENST00000371248 CCDC125Q86Z20 511 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms