RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 CABP4P57796 275 aa14.2□□□□□ -0.14
BRCC3-204ENST00000369462 RBM6P78332 1123 aaKnown RBP14.2□□□□□ -0.14
BRCC3-204ENST00000369462 LRRC37A3O60309 1634 aa14.2□□□□□ -0.14
BRCC3-204ENST00000369462 BTBD11A6QL63 1104 aa14.19□□□□□ -0.14
BRCC3-204ENST00000369462 EXOSC9Q06265 439 aaKnown RBP14.19□□□□□ -0.14
BRCC3-204ENST00000369462 ERVV-2B6SEH9 535 aa14.19□□□□□ -0.14
BRCC3-204ENST00000369462 KAT6BQ8WYB5 2073 aa14.18□□□□□ -0.14
BRCC3-204ENST00000369462 SCN11AQ9UI33 1791 aa14.18□□□□□ -0.14
BRCC3-204ENST00000369462 ADAMTS7Q9UKP4 1686 aa14.18□□□□□ -0.14
BRCC3-204ENST00000369462 RXRBP28702 533 aa14.18□□□□□ -0.14
BRCC3-204ENST00000369462 BABAM1Q9NWV8 329 aa14.18□□□□□ -0.14
BRCC3-204ENST00000369462 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
BRCC3-204ENST00000369462 ELL2O00472 640 aaPredicted RBP14.17□□□□□ -0.14
BRCC3-204ENST00000369462 POTEAQ6S8J7 498 aa14.17□□□□□ -0.14
BRCC3-204ENST00000369462 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
BRCC3-204ENST00000369462 KRT24Q2M2I5 525 aa14.17□□□□□ -0.14
BRCC3-204ENST00000369462 FAM182BQ5T319 152 aa14.17□□□□□ -0.14
BRCC3-204ENST00000369462 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
BRCC3-204ENST00000369462 KCNQ3O43525 872 aa14.16□□□□□ -0.14
BRCC3-204ENST00000369462 SLC39A6Q13433 755 aa14.16□□□□□ -0.14
BRCC3-204ENST00000369462 TSPYL6Q8N831 410 aa14.16□□□□□ -0.14
BRCC3-204ENST00000369462 C8orf58Q8NAV2 365 aa14.16□□□□□ -0.14
BRCC3-204ENST00000369462 TMOD3Q9NYL9 352 aa14.16□□□□□ -0.14
BRCC3-204ENST00000369462 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
BRCC3-204ENST00000369462 ACSBG1Q96GR2 724 aa14.15□□□□□ -0.14
BRCC3-204ENST00000369462 RCAN3Q9UKA8 241 aa14.15□□□□□ -0.14
BRCC3-204ENST00000369462 ZNF790Q6PG37 636 aa14.14□□□□□ -0.15
BRCC3-204ENST00000369462 MRC1P22897 1456 aa14.14□□□□□ -0.15
BRCC3-204ENST00000369462 PIGBQ92521 554 aa14.14□□□□□ -0.15
BRCC3-204ENST00000369462 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
BRCC3-204ENST00000369462 EP400Q96L91 3159 aa14.14□□□□□ -0.15
BRCC3-204ENST00000369462 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
BRCC3-204ENST00000369462 TTC5Q8N0Z6 440 aa14.13□□□□□ -0.15
BRCC3-204ENST00000369462 TOGARAM1Q9Y4F4 1720 aa14.13□□□□□ -0.15
BRCC3-204ENST00000369462 KRT27Q7Z3Y8 459 aa14.13□□□□□ -0.15
BRCC3-204ENST00000369462 SUPT16HQ9Y5B9 1047 aaKnown RBP14.13□□□□□ -0.15
BRCC3-204ENST00000369462 SIPA1L3O60292 1781 aaPredicted RBP14.13□□□□□ -0.15
BRCC3-204ENST00000369462 VAMP4O75379 141 aa14.12□□□□□ -0.15
BRCC3-204ENST00000369462 KCNQ2O43526 872 aa14.12□□□□□ -0.15
BRCC3-204ENST00000369462 CT47B1P0C2W7 299 aaPredicted RBP14.12□□□□□ -0.15
BRCC3-204ENST00000369462 ASAP1Q9ULH1 1129 aa14.11□□□□□ -0.15
BRCC3-204ENST00000369462 BCL9O00512 1426 aa14.11□□□□□ -0.15
BRCC3-204ENST00000369462 ZNF496Q96IT1 587 aaPredicted RBP14.11□□□□□ -0.15
BRCC3-204ENST00000369462 RARSP54136 660 aaKnown RBP14.1□□□□□ -0.15
BRCC3-204ENST00000369462 BCL2L13Q9BXK5 485 aa14.1□□□□□ -0.15
BRCC3-204ENST00000369462 PTCD1O75127 700 aaKnown RBP14.1□□□□□ -0.15
BRCC3-204ENST00000369462 BCAR3O75815 825 aa14.1□□□□□ -0.15
BRCC3-204ENST00000369462 DOT1LQ8TEK3 1739 aa14.09□□□□□ -0.15
BRCC3-204ENST00000369462 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
BRCC3-204ENST00000369462 TCERG1O14776 1098 aaKnown RBP14.09□□□□□ -0.15
BRCC3-204ENST00000369462 ATG3Q9NT62 314 aa14.09□□□□□ -0.15
BRCC3-204ENST00000369462 ITGB4P16144 1822 aa14.09□□□□□ -0.15
BRCC3-204ENST00000369462 FMNL2Q96PY5 1086 aa14.09□□□□□ -0.15
BRCC3-204ENST00000369462 GIGYF1O75420 1035 aaPredicted RBP14.08□□□□□ -0.16
BRCC3-204ENST00000369462 PTF1AQ7RTS3 328 aa14.08□□□□□ -0.16
BRCC3-204ENST00000369462 SSH1Q8WYL5 1049 aa14.08□□□□□ -0.16
BRCC3-204ENST00000369462 ZNF428Q96B54 188 aa14.08□□□□□ -0.16
BRCC3-204ENST00000369462 RGS12O14924 1447 aa14.08□□□□□ -0.16
BRCC3-204ENST00000369462 PRAMEF22A3QJZ6 481 aa14.08□□□□□ -0.16
BRCC3-204ENST00000369462 FAM196AQ6ZSG2 479 aa14.08□□□□□ -0.16
BRCC3-204ENST00000369462 NECTIN2Q92692 538 aa14.08□□□□□ -0.16
BRCC3-204ENST00000369462 BRWD3Q6RI45 1802 aa14.08□□□□□ -0.16
BRCC3-204ENST00000369462 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
BRCC3-204ENST00000369462 HEG1Q9ULI3 1381 aa14.07□□□□□ -0.16
BRCC3-204ENST00000369462 EIF2S2P20042 333 aaKnown RBP14.07□□□□□ -0.16
BRCC3-204ENST00000369462 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
BRCC3-204ENST00000369462 HOXB7P09629 217 aa14.06□□□□□ -0.16
BRCC3-204ENST00000369462 SNRPA1P09661 255 aaKnown RBP14.06□□□□□ -0.16
BRCC3-204ENST00000369462 HDGFL1Q5TGJ6 251 aa14.06□□□□□ -0.16
BRCC3-204ENST00000369462 SOS1Q07889 1333 aaPredicted RBP14.06□□□□□ -0.16
BRCC3-204ENST00000369462 ALDH1L2Q3SY69 923 aa14.05□□□□□ -0.16
BRCC3-204ENST00000369462 PLIN1O60240 522 aa14.05□□□□□ -0.16
BRCC3-204ENST00000369462 CCDC30Q5VVM6 783 aa14.05□□□□□ -0.16
BRCC3-204ENST00000369462 FRAT1Q92837 279 aaPredicted RBP14.05□□□□□ -0.16
BRCC3-204ENST00000369462 USP16Q9Y5T5 823 aa14.05□□□□□ -0.16
BRCC3-204ENST00000369462 RRP1P56182 461 aaKnown RBP14.04□□□□□ -0.16
BRCC3-204ENST00000369462 KCPQ6ZWJ8 1503 aa14.03□□□□□ -0.16
BRCC3-204ENST00000369462 TRIM37O94972 964 aa14.03□□□□□ -0.16
BRCC3-204ENST00000369462 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
BRCC3-204ENST00000369462 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
BRCC3-204ENST00000369462 RNF123Q5XPI4 1314 aa14.03□□□□□ -0.16
BRCC3-204ENST00000369462 MRPL50Q8N5N7 158 aaKnown RBP14.03□□□□□ -0.16
BRCC3-204ENST00000369462 SMARCC1Q92922 1105 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-204ENST00000369462 CHMP4AQ9BY43 222 aa14.03□□□□□ -0.16
BRCC3-204ENST00000369462 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-204ENST00000369462 PAPPAQ13219 1627 aa14.03□□□□□ -0.16
BRCC3-204ENST00000369462 PALLDQ8WX93 1383 aa14.02□□□□□ -0.16
BRCC3-204ENST00000369462 CANXP27824 592 aaKnown RBP14.02□□□□□ -0.16
BRCC3-204ENST00000369462 SLC4A9Q96Q91 983 aa14.02□□□□□ -0.16
BRCC3-204ENST00000369462 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.17
BRCC3-204ENST00000369462 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.02□□□□□ -0.17
BRCC3-204ENST00000369462 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
BRCC3-204ENST00000369462 CHPF2Q9P2E5 772 aa14.01□□□□□ -0.17
BRCC3-204ENST00000369462 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
BRCC3-204ENST00000369462 LOC102724428A0A0B4J2F2 783 aa14.01□□□□□ -0.17
BRCC3-204ENST00000369462 SIK1P57059 783 aa14.01□□□□□ -0.17
BRCC3-204ENST00000369462 DNAJC10Q8IXB1 793 aa14.01□□□□□ -0.17
BRCC3-204ENST00000369462 NOB1Q9ULX3 412 aaKnown RBP14.01□□□□□ -0.17
BRCC3-204ENST00000369462 ANXA1P04083 346 aa14□□□□□ -0.17
BRCC3-204ENST00000369462 NHSQ6T4R5 1651 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms