RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 ZNF790Q6PG37 636 aa17.81■□□□□ 0.44
SEMA6C-204ENST00000368914 USP16Q9Y5T5 823 aa17.81■□□□□ 0.44
SEMA6C-204ENST00000368914 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
SEMA6C-204ENST00000368914 DDX58O95786 925 aaKnown RBP17.81■□□□□ 0.44
SEMA6C-204ENST00000368914 GPTP24298 496 aa17.81■□□□□ 0.44
SEMA6C-204ENST00000368914 A1BGP04217 495 aa17.8■□□□□ 0.44
SEMA6C-204ENST00000368914 COPS6Q7L5N1 327 aa17.8■□□□□ 0.44
SEMA6C-204ENST00000368914 CERKQ8TCT0 537 aa17.8■□□□□ 0.44
SEMA6C-204ENST00000368914 FMNL2Q96PY5 1086 aa17.8■□□□□ 0.44
SEMA6C-204ENST00000368914 EXOC6BQ9Y2D4 811 aa17.8■□□□□ 0.44
SEMA6C-204ENST00000368914 DCAF5Q96JK2 942 aa17.8■□□□□ 0.44
SEMA6C-204ENST00000368914 SRCIN1Q9C0H9 1055 aa17.8■□□□□ 0.44
SEMA6C-204ENST00000368914 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
SEMA6C-204ENST00000368914 WDR17Q8IZU2 1322 aa17.8■□□□□ 0.44
SEMA6C-204ENST00000368914 TRMT2AQ8IZ69 625 aaKnown RBP17.79■□□□□ 0.44
SEMA6C-204ENST00000368914 CWF19L2Q2TBE0 894 aaKnown RBP17.79■□□□□ 0.44
SEMA6C-204ENST00000368914 ALDH1L2Q3SY69 923 aa17.79■□□□□ 0.44
SEMA6C-204ENST00000368914 XAGE3Q8WTP9 111 aa17.79■□□□□ 0.44
SEMA6C-204ENST00000368914 MYD88Q99836 296 aa17.79■□□□□ 0.44
SEMA6C-204ENST00000368914 MAP3K2Q9Y2U5 619 aa17.79■□□□□ 0.44
SEMA6C-204ENST00000368914 CT47B1P0C2W7 299 aaPredicted RBP17.78■□□□□ 0.44
SEMA6C-204ENST00000368914 UPF2Q9HAU5 1272 aaKnown RBP17.78■□□□□ 0.44
SEMA6C-204ENST00000368914 ASAP1Q9ULH1 1129 aa17.78■□□□□ 0.44
SEMA6C-204ENST00000368914 SOS2Q07890 1332 aaPredicted RBP17.78■□□□□ 0.44
SEMA6C-204ENST00000368914 SMARCA5O60264 1052 aaPredicted RBP17.78■□□□□ 0.44
SEMA6C-204ENST00000368914 PROSER3Q2NL68 480 aa17.78■□□□□ 0.44
SEMA6C-204ENST00000368914 TAF7LQ5H9L4 462 aa17.77■□□□□ 0.44
SEMA6C-204ENST00000368914 SLC52A2Q9HAB3 445 aa17.77■□□□□ 0.44
SEMA6C-204ENST00000368914 DBF4Q9UBU7 674 aaPredicted RBP17.77■□□□□ 0.44
SEMA6C-204ENST00000368914 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.44
SEMA6C-204ENST00000368914 SURF6O75683 361 aaKnown RBP17.77■□□□□ 0.43
SEMA6C-204ENST00000368914 IL1RAPL2Q9NP60 686 aa17.77■□□□□ 0.43
SEMA6C-204ENST00000368914 TRIM6-TRIM34B2RNG4 842 aa17.76■□□□□ 0.43
SEMA6C-204ENST00000368914 EIF4A1P60842 406 aaKnown RBP17.76■□□□□ 0.43
SEMA6C-204ENST00000368914 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
SEMA6C-204ENST00000368914 HMMRO75330 724 aa17.76■□□□□ 0.43
SEMA6C-204ENST00000368914 SNRPA1P09661 255 aaKnown RBP17.75■□□□□ 0.43
SEMA6C-204ENST00000368914 SPRYD3Q8NCJ5 442 aa17.75■□□□□ 0.43
SEMA6C-204ENST00000368914 CHMP4AQ9BY43 222 aa17.75■□□□□ 0.43
SEMA6C-204ENST00000368914 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
SEMA6C-204ENST00000368914 LRRFIP2Q9Y608 721 aaKnown RBP17.75■□□□□ 0.43
SEMA6C-204ENST00000368914 USP19O94966 1318 aa17.75■□□□□ 0.43
SEMA6C-204ENST00000368914 DNAAF4Q8WXU2 420 aa17.74■□□□□ 0.43
SEMA6C-204ENST00000368914 CARD10Q9BWT7 1032 aa17.74■□□□□ 0.43
SEMA6C-204ENST00000368914 PCDH11XQ9BZA7 1347 aa17.74■□□□□ 0.43
SEMA6C-204ENST00000368914 PCDH11YQ9BZA8 1340 aa17.74■□□□□ 0.43
SEMA6C-204ENST00000368914 SRGAP3O43295 1099 aa17.73■□□□□ 0.43
SEMA6C-204ENST00000368914 PHF14O94880 888 aa17.73■□□□□ 0.43
SEMA6C-204ENST00000368914 PDE4AP27815 886 aa17.73■□□□□ 0.43
SEMA6C-204ENST00000368914 DNAJC10Q8IXB1 793 aa17.73■□□□□ 0.43
SEMA6C-204ENST00000368914 HTATSF1O43719 755 aaKnown RBP17.73■□□□□ 0.43
SEMA6C-204ENST00000368914 GNAI2P04899 355 aa17.73■□□□□ 0.43
SEMA6C-204ENST00000368914 RILPL2Q969X0 211 aa17.73■□□□□ 0.43
SEMA6C-204ENST00000368914 ATP6V1AP38606 617 aa17.73■□□□□ 0.43
SEMA6C-204ENST00000368914 TSHZ3Q63HK5 1081 aa17.73■□□□□ 0.43
SEMA6C-204ENST00000368914 SMIM5Q71RC9 77 aa17.72■□□□□ 0.43
SEMA6C-204ENST00000368914 ZNF853P0CG23 659 aa17.72■□□□□ 0.43
SEMA6C-204ENST00000368914 SSH2Q76I76 1423 aa17.71■□□□□ 0.43
SEMA6C-204ENST00000368914 ITSN1Q15811 1721 aa17.71■□□□□ 0.43
SEMA6C-204ENST00000368914 STARD3NLO95772 234 aa17.71■□□□□ 0.43
SEMA6C-204ENST00000368914 SLC4A3P48751 1232 aa17.71■□□□□ 0.43
SEMA6C-204ENST00000368914 GIGYF1O75420 1035 aaPredicted RBP17.71■□□□□ 0.42
SEMA6C-204ENST00000368914 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.42
SEMA6C-204ENST00000368914 UBE3BQ7Z3V4 1068 aa17.71■□□□□ 0.42
SEMA6C-204ENST00000368914 KCNQ2O43526 872 aa17.7■□□□□ 0.42
SEMA6C-204ENST00000368914 MAP4K4O95819 1239 aaPredicted RBP17.7■□□□□ 0.42
SEMA6C-204ENST00000368914 ANKRD13DQ6ZTN6 518 aa17.7■□□□□ 0.42
SEMA6C-204ENST00000368914 GNAI3P08754 354 aa17.7■□□□□ 0.42
SEMA6C-204ENST00000368914 QTRT2Q9H974 415 aaKnown RBP17.69■□□□□ 0.42
SEMA6C-204ENST00000368914 TAOK2Q9UL54 1235 aa17.69■□□□□ 0.42
SEMA6C-204ENST00000368914 KIF6Q6ZMV9 814 aa17.69■□□□□ 0.42
SEMA6C-204ENST00000368914 A0A087WZG4 1122 aa17.68■□□□□ 0.42
SEMA6C-204ENST00000368914 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
SEMA6C-204ENST00000368914 CCDC24Q8N4L8 307 aa17.68■□□□□ 0.42
SEMA6C-204ENST00000368914 HSP90AA1P07900 732 aaKnown RBP17.68■□□□□ 0.42
SEMA6C-204ENST00000368914 NEUROD6Q96NK8 337 aa17.67■□□□□ 0.42
SEMA6C-204ENST00000368914 GORABQ5T7V8 394 aa17.67■□□□□ 0.42
SEMA6C-204ENST00000368914 PIGBQ92521 554 aa17.67■□□□□ 0.42
SEMA6C-204ENST00000368914 C16orf71Q8IYS4 520 aaPredicted RBP17.67■□□□□ 0.42
SEMA6C-204ENST00000368914 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
SEMA6C-204ENST00000368914 HYPKQ9NX55 129 aa17.66■□□□□ 0.42
SEMA6C-204ENST00000368914 NBPF7P0C2Y1 421 aaPredicted RBP17.66■□□□□ 0.42
SEMA6C-204ENST00000368914 TTLL7Q6ZT98 887 aa17.65■□□□□ 0.42
SEMA6C-204ENST00000368914 RNF123Q5XPI4 1314 aa17.65■□□□□ 0.42
SEMA6C-204ENST00000368914 NUTM1Q86Y26 1132 aa17.65■□□□□ 0.42
SEMA6C-204ENST00000368914 NALCNQ8IZF0 1738 aa17.65■□□□□ 0.42
SEMA6C-204ENST00000368914 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.42
SEMA6C-204ENST00000368914 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
SEMA6C-204ENST00000368914 PA2G4Q9UQ80 394 aaKnown RBP17.65■□□□□ 0.42
SEMA6C-204ENST00000368914 COL3A1P02461 1466 aaPredicted RBP17.65■□□□□ 0.42
SEMA6C-204ENST00000368914 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
SEMA6C-204ENST00000368914 ZBTB7BO15156 539 aaPredicted RBP17.64■□□□□ 0.41
SEMA6C-204ENST00000368914 UNC5CLQ8IV45 518 aa17.64■□□□□ 0.41
SEMA6C-204ENST00000368914 ZBTB40Q9NUA8 1239 aa17.64■□□□□ 0.41
SEMA6C-204ENST00000368914 AFF2P51816 1311 aa17.64■□□□□ 0.41
SEMA6C-204ENST00000368914 SETD1AO15047 1707 aaKnown RBP17.63■□□□□ 0.41
SEMA6C-204ENST00000368914 WWC3Q9ULE0 1092 aa17.63■□□□□ 0.41
SEMA6C-204ENST00000368914 PPP1R42Q7Z4L9 355 aa17.63■□□□□ 0.41
SEMA6C-204ENST00000368914 NBR1Q14596 966 aa17.63■□□□□ 0.41
SEMA6C-204ENST00000368914 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms