RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 TNS3Q68CZ2 1445 aa21.85■■□□□ 1.09
LMNA-205ENST00000368299 LGR6Q9HBX8 967 aa21.85■■□□□ 1.09
LMNA-205ENST00000368299 ZC3H6P61129 1189 aaKnown RBP21.84■■□□□ 1.09
LMNA-205ENST00000368299 ABCC6O95255 1503 aa21.84■■□□□ 1.09
LMNA-205ENST00000368299 CEP85Q6P2H3 762 aa21.83■■□□□ 1.09
LMNA-205ENST00000368299 EIF4A1P60842 406 aaKnown RBP21.83■■□□□ 1.09
LMNA-205ENST00000368299 FKBP5Q13451 457 aaPredicted RBP21.83■■□□□ 1.09
LMNA-205ENST00000368299 BMP2KLQ5H9B9 411 aa21.83■■□□□ 1.09
LMNA-205ENST00000368299 HDGFL1Q5TGJ6 251 aa21.83■■□□□ 1.09
LMNA-205ENST00000368299 SLC4A10Q6U841 1118 aa21.83■■□□□ 1.09
LMNA-205ENST00000368299 MEIS3Q99687 375 aa21.83■■□□□ 1.09
LMNA-205ENST00000368299 TBC1D32Q96NH3 1257 aa21.82■■□□□ 1.08
LMNA-205ENST00000368299 KDM3BQ7LBC6 1761 aa21.82■■□□□ 1.08
LMNA-205ENST00000368299 RNMTO43148 476 aaKnown RBP21.82■■□□□ 1.08
LMNA-205ENST00000368299 PLEKHG2Q9H7P9 1386 aa21.82■■□□□ 1.08
LMNA-205ENST00000368299 PXDNLA1KZ92 1463 aa21.81■■□□□ 1.08
LMNA-205ENST00000368299 PXDNQ92626 1479 aa21.81■■□□□ 1.08
LMNA-205ENST00000368299 BTBD11A6QL63 1104 aa21.81■■□□□ 1.08
LMNA-205ENST00000368299 F6X3S4 739 aa21.81■■□□□ 1.08
LMNA-205ENST00000368299 HMMRO75330 724 aa21.81■■□□□ 1.08
LMNA-205ENST00000368299 MPRIPQ6WCQ1 1025 aa21.81■■□□□ 1.08
LMNA-205ENST00000368299 SPATA31A3Q5VYP0 1347 aa21.8■■□□□ 1.08
LMNA-205ENST00000368299 DDX17Q92841 729 aaKnown RBP21.8■■□□□ 1.08
LMNA-205ENST00000368299 GNAI3P08754 354 aa21.79■■□□□ 1.08
LMNA-205ENST00000368299 RGPD5Q99666 1765 aa21.79■■□□□ 1.08
LMNA-205ENST00000368299 RAPGEF4Q8WZA2 1011 aa21.78■■□□□ 1.08
LMNA-205ENST00000368299 NECTIN2Q92692 538 aa21.78■■□□□ 1.08
LMNA-205ENST00000368299 GNAI2P04899 355 aa21.77■■□□□ 1.08
LMNA-205ENST00000368299 BECN1Q14457 450 aa21.77■■□□□ 1.08
LMNA-205ENST00000368299 XIRP1Q702N8 1843 aaKnown RBP21.77■■□□□ 1.08
LMNA-205ENST00000368299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.77■■□□□ 1.08
LMNA-205ENST00000368299 CPDO75976 1380 aa21.76■■□□□ 1.07
LMNA-205ENST00000368299 COL18A1P39060 1754 aa21.76■■□□□ 1.07
LMNA-205ENST00000368299 STRCQ7RTU9 1775 aa21.76■■□□□ 1.07
LMNA-205ENST00000368299 N4BP2Q86UW6 1770 aaPredicted RBP21.76■■□□□ 1.07
LMNA-205ENST00000368299 NLRP2Q9NX02 1062 aa21.76■■□□□ 1.07
LMNA-205ENST00000368299 KDM4FA0A1W2PPD8 638 aa21.76■■□□□ 1.07
LMNA-205ENST00000368299 ADAMTS7Q9UKP4 1686 aa21.75■■□□□ 1.07
LMNA-205ENST00000368299 BRINP3Q76B58 766 aa21.75■■□□□ 1.07
LMNA-205ENST00000368299 TATP17735 454 aaPredicted RBP21.75■■□□□ 1.07
LMNA-205ENST00000368299 SPG7Q9UQ90 795 aa21.74■■□□□ 1.07
LMNA-205ENST00000368299 CRYBG1Q9Y4K1 1723 aa21.74■■□□□ 1.07
LMNA-205ENST00000368299 EIF5BO60841 1220 aaKnown RBP21.73■■□□□ 1.07
LMNA-205ENST00000368299 EIF2S2P20042 333 aaKnown RBP21.73■■□□□ 1.07
LMNA-205ENST00000368299 C22orf23Q9BZE7 217 aa21.73■■□□□ 1.07
LMNA-205ENST00000368299 CSB-PGBD3P0DP91 1061 aa21.72■■□□□ 1.07
LMNA-205ENST00000368299 SLC4A3P48751 1232 aa21.72■■□□□ 1.07
LMNA-205ENST00000368299 MFAP1P55081 439 aaKnown RBP21.72■■□□□ 1.07
LMNA-205ENST00000368299 CABLES1Q8TDN4 633 aa21.72■■□□□ 1.07
LMNA-205ENST00000368299 HEG1Q9ULI3 1381 aa21.72■■□□□ 1.07
LMNA-205ENST00000368299 KCNQ3O43525 872 aa21.72■■□□□ 1.07
LMNA-205ENST00000368299 PLEKHM2Q8IWE5 1019 aa21.72■■□□□ 1.07
LMNA-205ENST00000368299 PHAXQ9H814 394 aaKnown RBP21.71■■□□□ 1.07
LMNA-205ENST00000368299 CHPF2Q9P2E5 772 aa21.71■■□□□ 1.07
LMNA-205ENST00000368299 DBF4Q9UBU7 674 aaPredicted RBP21.71■■□□□ 1.07
LMNA-205ENST00000368299 SIPA1L3O60292 1781 aaPredicted RBP21.7■■□□□ 1.06
LMNA-205ENST00000368299 GIGYF1O75420 1035 aaPredicted RBP21.69■■□□□ 1.06
LMNA-205ENST00000368299 SLAIN2Q9P270 581 aa21.69■■□□□ 1.06
LMNA-205ENST00000368299 SOS2Q07890 1332 aaPredicted RBP21.68■■□□□ 1.06
LMNA-205ENST00000368299 SRCIN1Q9C0H9 1055 aa21.68■■□□□ 1.06
LMNA-205ENST00000368299 PHKG2P15735 406 aa21.68■■□□□ 1.06
LMNA-205ENST00000368299 ATP8B2P98198 1209 aa21.68■■□□□ 1.06
LMNA-205ENST00000368299 IFNL2Q8IZJ0 200 aa21.68■■□□□ 1.06
LMNA-205ENST00000368299 ZNF335Q9H4Z2 1342 aaPredicted RBP21.67■■□□□ 1.06
LMNA-205ENST00000368299 CHRNA2Q15822 529 aa21.67■■□□□ 1.06
LMNA-205ENST00000368299 USP44Q9H0E7 712 aa21.67■■□□□ 1.06
LMNA-205ENST00000368299 MEGF6O75095 1541 aa21.67■■□□□ 1.06
LMNA-205ENST00000368299 UBTFL1P0CB47 393 aaPredicted RBP21.67■■□□□ 1.06
LMNA-205ENST00000368299 TTC22Q5TAA0 569 aa21.67■■□□□ 1.06
LMNA-205ENST00000368299 DNAAF4Q8WXU2 420 aa21.67■■□□□ 1.06
LMNA-205ENST00000368299 CDC45O75419 566 aa21.66■■□□□ 1.06
LMNA-205ENST00000368299 SLC52A2Q9HAB3 445 aa21.66■■□□□ 1.06
LMNA-205ENST00000368299 RBM25P49756 843 aaKnown RBP21.66■■□□□ 1.06
LMNA-205ENST00000368299 SCN11AQ9UI33 1791 aa21.65■■□□□ 1.06
LMNA-205ENST00000368299 HSP90AB1P08238 724 aaKnown RBP21.64■■□□□ 1.06
LMNA-205ENST00000368299 TBC1D9Q6ZT07 1266 aa21.64■■□□□ 1.06
LMNA-205ENST00000368299 KDM6AO15550 1401 aaPredicted RBP21.64■■□□□ 1.06
LMNA-205ENST00000368299 PI4KAP2A4QPH2 592 aa21.64■■□□□ 1.05
LMNA-205ENST00000368299 GSPT1P15170 499 aaKnown RBP21.64■■□□□ 1.05
LMNA-205ENST00000368299 PI4KAP1Q8N8J0 262 aa21.64■■□□□ 1.05
LMNA-205ENST00000368299 DCAF5Q96JK2 942 aa21.64■■□□□ 1.05
LMNA-205ENST00000368299 LRRFIP2Q9Y608 721 aaKnown RBP21.64■■□□□ 1.05
LMNA-205ENST00000368299 HYPKQ9NX55 129 aa21.63■■□□□ 1.05
LMNA-205ENST00000368299 BEND3Q5T5X7 828 aa21.63■■□□□ 1.05
LMNA-205ENST00000368299 ZNF790Q6PG37 636 aa21.63■■□□□ 1.05
LMNA-205ENST00000368299 C16orf71Q8IYS4 520 aaPredicted RBP21.63■■□□□ 1.05
LMNA-205ENST00000368299 PKD1L3Q7Z443 1732 aa21.62■■□□□ 1.05
LMNA-205ENST00000368299 OSBPL3Q9H4L5 887 aa21.62■■□□□ 1.05
LMNA-205ENST00000368299 PRDM11Q9NQV5 511 aa21.62■■□□□ 1.05
LMNA-205ENST00000368299 SMARCA5O60264 1052 aaPredicted RBP21.61■■□□□ 1.05
LMNA-205ENST00000368299 NFKBIBQ15653 356 aa21.61■■□□□ 1.05
LMNA-205ENST00000368299 MRC1P22897 1456 aa21.61■■□□□ 1.05
LMNA-205ENST00000368299 PNMA6EA0A0J9YXQ4 647 aa21.6■■□□□ 1.05
LMNA-205ENST00000368299 APBB1O00213 710 aa21.6■■□□□ 1.05
LMNA-205ENST00000368299 LRRCC1Q9C099 1032 aa21.6■■□□□ 1.05
LMNA-205ENST00000368299 ADCY9O60503 1353 aa21.6■■□□□ 1.05
LMNA-205ENST00000368299 TBC1D2Q9BYX2 928 aa21.6■■□□□ 1.05
LMNA-205ENST00000368299 WDR17Q8IZU2 1322 aa21.6■■□□□ 1.05
LMNA-205ENST00000368299 IBTKQ9P2D0 1353 aaPredicted RBP21.6■■□□□ 1.05
LMNA-205ENST00000368299 KSR2Q6VAB6 950 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms