RNA–Protein interactions for RNA: ENST00000366733.5

MRPL55-207, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-207ENST00000366733 MBIPQ9NS73 344 aa17.22■□□□□ 0.35
MRPL55-207ENST00000366733 RGS12O14924 1447 aa17.21■□□□□ 0.35
MRPL55-207ENST00000366733 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
MRPL55-207ENST00000366733 A0A0G2JS52 829 aa17.2■□□□□ 0.34
MRPL55-207ENST00000366733 CABP4P57796 275 aa17.2■□□□□ 0.34
MRPL55-207ENST00000366733 MYT1Q01538 1121 aa17.2■□□□□ 0.34
MRPL55-207ENST00000366733 TOGARAM1Q9Y4F4 1720 aa17.19■□□□□ 0.34
MRPL55-207ENST00000366733 CT47B1P0C2W7 299 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-207ENST00000366733 KRT27Q7Z3Y8 459 aa17.19■□□□□ 0.34
MRPL55-207ENST00000366733 NFATC2IPQ8NCF5 419 aa17.19■□□□□ 0.34
MRPL55-207ENST00000366733 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
MRPL55-207ENST00000366733 SIPA1L3O60292 1781 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-207ENST00000366733 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
MRPL55-207ENST00000366733 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-207ENST00000366733 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
MRPL55-207ENST00000366733 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
MRPL55-207ENST00000366733 TMOD3Q9NYL9 352 aa17.17■□□□□ 0.34
MRPL55-207ENST00000366733 SOS1Q07889 1333 aaPredicted RBP17.17■□□□□ 0.34
MRPL55-207ENST00000366733 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
MRPL55-207ENST00000366733 PIGBQ92521 554 aa17.16■□□□□ 0.34
MRPL55-207ENST00000366733 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
MRPL55-207ENST00000366733 PRIM1P49642 420 aaKnown RBP17.15■□□□□ 0.34
MRPL55-207ENST00000366733 FAM196AQ6ZSG2 479 aa17.15■□□□□ 0.34
MRPL55-207ENST00000366733 MIS18AQ9NYP9 233 aa17.15■□□□□ 0.34
MRPL55-207ENST00000366733 HOXB7P09629 217 aa17.14■□□□□ 0.33
MRPL55-207ENST00000366733 EIF4A1P60842 406 aaKnown RBP17.14■□□□□ 0.33
MRPL55-207ENST00000366733 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
MRPL55-207ENST00000366733 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
MRPL55-207ENST00000366733 KDM3BQ7LBC6 1761 aa17.14■□□□□ 0.33
MRPL55-207ENST00000366733 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
MRPL55-207ENST00000366733 C8orf58Q8NAV2 365 aa17.12■□□□□ 0.33
MRPL55-207ENST00000366733 DOT1LQ8TEK3 1739 aa17.12■□□□□ 0.33
MRPL55-207ENST00000366733 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
MRPL55-207ENST00000366733 NHSQ6T4R5 1651 aa17.11■□□□□ 0.33
MRPL55-207ENST00000366733 KCNQ3O43525 872 aa17.11■□□□□ 0.33
MRPL55-207ENST00000366733 TTC5Q8N0Z6 440 aa17.11■□□□□ 0.33
MRPL55-207ENST00000366733 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
MRPL55-207ENST00000366733 KCNQ2O43526 872 aa17.1■□□□□ 0.33
MRPL55-207ENST00000366733 VAMP4O75379 141 aa17.1■□□□□ 0.33
MRPL55-207ENST00000366733 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
MRPL55-207ENST00000366733 ACSBG1Q96GR2 724 aa17.1■□□□□ 0.33
MRPL55-207ENST00000366733 FMNL2Q96PY5 1086 aa17.1■□□□□ 0.33
MRPL55-207ENST00000366733 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-207ENST00000366733 TWISTNBQ3B726 338 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-207ENST00000366733 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
MRPL55-207ENST00000366733 VSIG10Q8N0Z9 540 aa17.09■□□□□ 0.33
MRPL55-207ENST00000366733 TSPYL6Q8N831 410 aa17.09■□□□□ 0.33
MRPL55-207ENST00000366733 SYTL4Q96C24 671 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-207ENST00000366733 ZNF496Q96IT1 587 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-207ENST00000366733 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
MRPL55-207ENST00000366733 BRWD3Q6RI45 1802 aa17.08■□□□□ 0.33
MRPL55-207ENST00000366733 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-207ENST00000366733 KRT24Q2M2I5 525 aa17.08■□□□□ 0.32
MRPL55-207ENST00000366733 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-207ENST00000366733 CHMP4AQ9BY43 222 aa17.08■□□□□ 0.32
MRPL55-207ENST00000366733 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
MRPL55-207ENST00000366733 UBR2Q8IWV8 1755 aa17.07■□□□□ 0.32
MRPL55-207ENST00000366733 EP400Q96L91 3159 aa17.06■□□□□ 0.32
MRPL55-207ENST00000366733 ITGB4P16144 1822 aa17.06■□□□□ 0.32
MRPL55-207ENST00000366733 SNRPA1P09661 255 aaKnown RBP17.06■□□□□ 0.32
MRPL55-207ENST00000366733 RARSP54136 660 aaKnown RBP17.06■□□□□ 0.32
MRPL55-207ENST00000366733 BRPF1P55201 1214 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-207ENST00000366733 ALDH1L2Q3SY69 923 aa17.06■□□□□ 0.32
MRPL55-207ENST00000366733 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
MRPL55-207ENST00000366733 PALLDQ8WX93 1383 aa17.05■□□□□ 0.32
MRPL55-207ENST00000366733 PTF1AQ7RTS3 328 aa17.05■□□□□ 0.32
MRPL55-207ENST00000366733 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-207ENST00000366733 RNF123Q5XPI4 1314 aa17.04■□□□□ 0.32
MRPL55-207ENST00000366733 SLC4A9Q96Q91 983 aa17.03■□□□□ 0.32
MRPL55-207ENST00000366733 TEX13AQ9BXU3 409 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-207ENST00000366733 ZNF831Q5JPB2 1677 aa17.02■□□□□ 0.32
MRPL55-207ENST00000366733 ELL2O00472 640 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-207ENST00000366733 PTCD1O75127 700 aaKnown RBP17.02■□□□□ 0.32
MRPL55-207ENST00000366733 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.32
MRPL55-207ENST00000366733 ERBB4Q15303 1308 aa17.01■□□□□ 0.31
MRPL55-207ENST00000366733 SBF2Q86WG5 1849 aa17.01■□□□□ 0.31
MRPL55-207ENST00000366733 LOC102724428A0A0B4J2F2 783 aa17.01■□□□□ 0.31
MRPL55-207ENST00000366733 SIK1P57059 783 aa17.01■□□□□ 0.31
MRPL55-207ENST00000366733 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
MRPL55-207ENST00000366733 CCDC30Q5VVM6 783 aa17.01■□□□□ 0.31
MRPL55-207ENST00000366733 PRAMEF22A3QJZ6 481 aa17■□□□□ 0.31
MRPL55-207ENST00000366733 TRIM37O94972 964 aa17■□□□□ 0.31
MRPL55-207ENST00000366733 PLSCR1O15162 318 aa16.99■□□□□ 0.31
MRPL55-207ENST00000366733 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
MRPL55-207ENST00000366733 BTAF1O14981 1849 aa16.98■□□□□ 0.31
MRPL55-207ENST00000366733 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
MRPL55-207ENST00000366733 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
MRPL55-207ENST00000366733 USP16Q9Y5T5 823 aa16.98■□□□□ 0.31
MRPL55-207ENST00000366733 BCAR3O75815 825 aa16.97■□□□□ 0.31
MRPL55-207ENST00000366733 STARD3NLO95772 234 aa16.97■□□□□ 0.31
MRPL55-207ENST00000366733 CYP19A1P11511 503 aaPredicted RBP16.97■□□□□ 0.31
MRPL55-207ENST00000366733 PDIA6Q15084 440 aa16.97■□□□□ 0.31
MRPL55-207ENST00000366733 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
MRPL55-207ENST00000366733 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
MRPL55-207ENST00000366733 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
MRPL55-207ENST00000366733 HMGB2P26583 209 aaKnown RBP16.96■□□□□ 0.31
MRPL55-207ENST00000366733 ITPK1Q13572 414 aa16.96■□□□□ 0.31
MRPL55-207ENST00000366733 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
MRPL55-207ENST00000366733 LRP10Q7Z4F1 713 aa16.96■□□□□ 0.31
MRPL55-207ENST00000366733 ARHGAP45Q92619 1136 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms