RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.53
MRPL55-205ENST00000366731 AK7Q96M32 723 aa18.33■□□□□ 0.53
MRPL55-205ENST00000366731 LY75O60449 1722 aa18.33■□□□□ 0.53
MRPL55-205ENST00000366731 PTCD1O75127 700 aaKnown RBP18.32■□□□□ 0.52
MRPL55-205ENST00000366731 PHF14O94880 888 aa18.32■□□□□ 0.52
MRPL55-205ENST00000366731 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
MRPL55-205ENST00000366731 PRKAR2BP31323 418 aa18.32■□□□□ 0.52
MRPL55-205ENST00000366731 MSL1Q68DK7 614 aa18.31■□□□□ 0.52
MRPL55-205ENST00000366731 AMIGO3Q86WK7 504 aa18.31■□□□□ 0.52
MRPL55-205ENST00000366731 PHACTR3Q96KR7 559 aa18.31■□□□□ 0.52
MRPL55-205ENST00000366731 SLC4A9Q96Q91 983 aa18.31■□□□□ 0.52
MRPL55-205ENST00000366731 SLC16A10Q8TF71 515 aa18.3■□□□□ 0.52
MRPL55-205ENST00000366731 SGIP1Q9BQI5 828 aa18.3■□□□□ 0.52
MRPL55-205ENST00000366731 HMGB2P26583 209 aaKnown RBP18.29■□□□□ 0.52
MRPL55-205ENST00000366731 ZEB1P37275 1124 aaPredicted RBP18.29■□□□□ 0.52
MRPL55-205ENST00000366731 KLHL34Q8N239 644 aa18.29■□□□□ 0.52
MRPL55-205ENST00000366731 ARXQ96QS3 562 aa18.29■□□□□ 0.52
MRPL55-205ENST00000366731 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
MRPL55-205ENST00000366731 SLC52A2Q9HAB3 445 aa18.29■□□□□ 0.52
MRPL55-205ENST00000366731 GNPATO15228 680 aa18.28■□□□□ 0.52
MRPL55-205ENST00000366731 SLC39A6Q13433 755 aa18.28■□□□□ 0.52
MRPL55-205ENST00000366731 GAS2L2Q8NHY3 880 aa18.28■□□□□ 0.52
MRPL55-205ENST00000366731 FHDC1Q9C0D6 1143 aaPredicted RBP18.28■□□□□ 0.52
MRPL55-205ENST00000366731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.27■□□□□ 0.52
MRPL55-205ENST00000366731 POLD1P28340 1107 aa18.27■□□□□ 0.52
MRPL55-205ENST00000366731 GNAT3A8MTJ3 354 aa18.26■□□□□ 0.51
MRPL55-205ENST00000366731 FLAD1Q8NFF5 587 aa18.26■□□□□ 0.51
MRPL55-205ENST00000366731 IL17REQ8NFR9 667 aa18.25■□□□□ 0.51
MRPL55-205ENST00000366731 C5P01031 1676 aa18.25■□□□□ 0.51
MRPL55-205ENST00000366731 FCHSD2O94868 740 aa18.24■□□□□ 0.51
MRPL55-205ENST00000366731 SYT17Q9BSW7 474 aa18.24■□□□□ 0.51
MRPL55-205ENST00000366731 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
MRPL55-205ENST00000366731 RALBP1Q15311 655 aa18.23■□□□□ 0.51
MRPL55-205ENST00000366731 C4BP0C0L5 1744 aa18.23■□□□□ 0.51
MRPL55-205ENST00000366731 TEFQ10587 303 aa18.23■□□□□ 0.51
MRPL55-205ENST00000366731 TUBGCP6Q96RT7 1819 aa18.22■□□□□ 0.51
MRPL55-205ENST00000366731 SSFA2P28290 1259 aa18.22■□□□□ 0.51
MRPL55-205ENST00000366731 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
MRPL55-205ENST00000366731 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
MRPL55-205ENST00000366731 CRKLP46109 303 aaKnown RBP18.2■□□□□ 0.5
MRPL55-205ENST00000366731 TRAPPC3LQ5T215 181 aa18.2■□□□□ 0.5
MRPL55-205ENST00000366731 DNAJC10Q8IXB1 793 aa18.2■□□□□ 0.5
MRPL55-205ENST00000366731 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
MRPL55-205ENST00000366731 DCTN1Q14203 1278 aa18.19■□□□□ 0.5
MRPL55-205ENST00000366731 RC3H1Q5TC82 1133 aaKnown RBP18.19■□□□□ 0.5
MRPL55-205ENST00000366731 MCM10Q7L590 875 aa18.19■□□□□ 0.5
MRPL55-205ENST00000366731 RTF1Q92541 710 aaKnown RBP18.19■□□□□ 0.5
MRPL55-205ENST00000366731 RPS6KA4O75676 772 aa18.18■□□□□ 0.5
MRPL55-205ENST00000366731 NEFMP07197 916 aa18.18■□□□□ 0.5
MRPL55-205ENST00000366731 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
MRPL55-205ENST00000366731 ARHGEF1Q92888 912 aaKnown RBP18.18■□□□□ 0.5
MRPL55-205ENST00000366731 SCN11AQ9UI33 1791 aa18.18■□□□□ 0.5
MRPL55-205ENST00000366731 CNTNAP4Q9C0A0 1308 aa18.18■□□□□ 0.5
MRPL55-205ENST00000366731 QSER1Q2KHR3 1735 aa18.17■□□□□ 0.5
MRPL55-205ENST00000366731 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
MRPL55-205ENST00000366731 RFC4P35249 363 aa18.16■□□□□ 0.5
MRPL55-205ENST00000366731 MRC1P22897 1456 aa18.16■□□□□ 0.5
MRPL55-205ENST00000366731 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
MRPL55-205ENST00000366731 KCNQ3O43525 872 aa18.15■□□□□ 0.5
MRPL55-205ENST00000366731 INTS5Q6P9B9 1019 aaKnown RBP18.15■□□□□ 0.5
MRPL55-205ENST00000366731 ZNF790Q6PG37 636 aa18.15■□□□□ 0.5
MRPL55-205ENST00000366731 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
MRPL55-205ENST00000366731 NLGN2Q8NFZ4 835 aa18.15■□□□□ 0.5
MRPL55-205ENST00000366731 ZNF496Q96IT1 587 aaPredicted RBP18.15■□□□□ 0.5
MRPL55-205ENST00000366731 PLEKHF1Q96S99 279 aa18.15■□□□□ 0.5
MRPL55-205ENST00000366731 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
MRPL55-205ENST00000366731 CYP19A1P11511 503 aaPredicted RBP18.14■□□□□ 0.49
MRPL55-205ENST00000366731 SRP68Q9UHB9 627 aaKnown RBP18.14■□□□□ 0.49
MRPL55-205ENST00000366731 CEMIPQ8WUJ3 1361 aa18.13■□□□□ 0.49
MRPL55-205ENST00000366731 ADRA2BP18089 450 aa18.13■□□□□ 0.49
MRPL55-205ENST00000366731 UBR3Q6ZT12 1888 aa18.12■□□□□ 0.49
MRPL55-205ENST00000366731 MAPK8IP3Q9UPT6 1336 aa18.12■□□□□ 0.49
MRPL55-205ENST00000366731 MMP10P09238 476 aa18.12■□□□□ 0.49
MRPL55-205ENST00000366731 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
MRPL55-205ENST00000366731 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
MRPL55-205ENST00000366731 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
MRPL55-205ENST00000366731 KCPQ6ZWJ8 1503 aa18.11■□□□□ 0.49
MRPL55-205ENST00000366731 NFE2L2Q16236 605 aa18.11■□□□□ 0.49
MRPL55-205ENST00000366731 GPR162Q16538 588 aa18.11■□□□□ 0.49
MRPL55-205ENST00000366731 VSIG10Q8N0Z9 540 aa18.11■□□□□ 0.49
MRPL55-205ENST00000366731 MIS18AQ9NYP9 233 aa18.11■□□□□ 0.49
MRPL55-205ENST00000366731 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
MRPL55-205ENST00000366731 ADAMTS7Q9UKP4 1686 aa18.1■□□□□ 0.49
MRPL55-205ENST00000366731 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
MRPL55-205ENST00000366731 HTATSF1O43719 755 aaKnown RBP18.1■□□□□ 0.49
MRPL55-205ENST00000366731 GYS1P13807 737 aa18.1■□□□□ 0.49
MRPL55-205ENST00000366731 NLGN1Q8N2Q7 840 aa18.1■□□□□ 0.49
MRPL55-205ENST00000366731 FMNL2Q96PY5 1086 aa18.1■□□□□ 0.49
MRPL55-205ENST00000366731 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
MRPL55-205ENST00000366731 STARD3NLO95772 234 aa18.09■□□□□ 0.49
MRPL55-205ENST00000366731 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
MRPL55-205ENST00000366731 HEG1Q9ULI3 1381 aa18.09■□□□□ 0.49
MRPL55-205ENST00000366731 WDR43Q15061 677 aaKnown RBP eCLIP18.08■□□□□ 0.49
MRPL55-205ENST00000366731 WWC3Q9ULE0 1092 aa18.08■□□□□ 0.49
MRPL55-205ENST00000366731 ZNF330Q9Y3S2 320 aaPredicted RBP18.08■□□□□ 0.49
MRPL55-205ENST00000366731 ZNF831Q5JPB2 1677 aa18.08■□□□□ 0.48
MRPL55-205ENST00000366731 TJP1Q07157 1748 aa18.07■□□□□ 0.48
MRPL55-205ENST00000366731 ZPR1O75312 459 aa18.07■□□□□ 0.48
MRPL55-205ENST00000366731 FKBP8Q14318 412 aa18.07■□□□□ 0.48
MRPL55-205ENST00000366731 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms