RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 INTS3Q68E01 1043 aaKnown RBP23.89■■□□□ 1.42
TRIM58-201ENST00000366481 TMEM63CQ9P1W3 806 aa23.89■■□□□ 1.42
TRIM58-201ENST00000366481 ANKRD26Q9UPS8 1709 aa23.89■■□□□ 1.42
TRIM58-201ENST00000366481 CLTCQ00610 1675 aaKnown RBP23.89■■□□□ 1.41
TRIM58-201ENST00000366481 CDK12Q9NYV4 1490 aaPredicted RBP23.89■■□□□ 1.41
TRIM58-201ENST00000366481 IBTKQ9P2D0 1353 aaPredicted RBP23.89■■□□□ 1.41
TRIM58-201ENST00000366481 AK9Q5TCS8 1911 aa23.88■■□□□ 1.41
TRIM58-201ENST00000366481 CASC1Q6TDU7 716 aa23.88■■□□□ 1.41
TRIM58-201ENST00000366481 LRSAM1Q6UWE0 723 aa23.88■■□□□ 1.41
TRIM58-201ENST00000366481 NGDNQ8NEJ9 315 aaKnown RBP23.88■■□□□ 1.41
TRIM58-201ENST00000366481 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
TRIM58-201ENST00000366481 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
TRIM58-201ENST00000366481 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
TRIM58-201ENST00000366481 AMPHP49418 695 aa23.88■■□□□ 1.41
TRIM58-201ENST00000366481 USP26Q9BXU7 913 aa23.87■■□□□ 1.41
TRIM58-201ENST00000366481 AATKQ6ZMQ8 1374 aa23.87■■□□□ 1.41
TRIM58-201ENST00000366481 PDLIM2Q96JY6 352 aa23.86■■□□□ 1.41
TRIM58-201ENST00000366481 NSFL1CQ9UNZ2 370 aaKnown RBP23.86■■□□□ 1.41
TRIM58-201ENST00000366481 USHBP1Q8N6Y0 703 aa23.86■■□□□ 1.41
TRIM58-201ENST00000366481 RTL1A6NKG5 1358 aa23.85■■□□□ 1.41
TRIM58-201ENST00000366481 MCM5P33992 734 aa23.84■■□□□ 1.41
TRIM58-201ENST00000366481 FKBP5Q13451 457 aaPredicted RBP23.84■■□□□ 1.41
TRIM58-201ENST00000366481 CCDC94Q9BW85 323 aaPredicted RBP23.84■■□□□ 1.41
TRIM58-201ENST00000366481 CWC22Q9HCG8 908 aaKnown RBP23.84■■□□□ 1.41
TRIM58-201ENST00000366481 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.83■■□□□ 1.41
TRIM58-201ENST00000366481 CLEC17AQ6ZS10 378 aa23.83■■□□□ 1.4
TRIM58-201ENST00000366481 RILPL2Q969X0 211 aa23.83■■□□□ 1.4
TRIM58-201ENST00000366481 TSPY26PQ9H489 355 aa23.83■■□□□ 1.4
TRIM58-201ENST00000366481 CDC42BPGQ6DT37 1551 aa23.83■■□□□ 1.4
TRIM58-201ENST00000366481 ATP10DQ9P241 1426 aa23.82■■□□□ 1.4
TRIM58-201ENST00000366481 RPAP2Q8IXW5 612 aaPredicted RBP23.82■■□□□ 1.4
TRIM58-201ENST00000366481 C17orf53Q8N3J3 647 aaPredicted RBP23.82■■□□□ 1.4
TRIM58-201ENST00000366481 EYA1Q99502 592 aa23.82■■□□□ 1.4
TRIM58-201ENST00000366481 DTNBO60941 627 aa23.82■■□□□ 1.4
TRIM58-201ENST00000366481 RGS12O14924 1447 aa23.81■■□□□ 1.4
TRIM58-201ENST00000366481 GDPD2Q9HCC8 539 aa23.81■■□□□ 1.4
TRIM58-201ENST00000366481 TRIM6-TRIM34B2RNG4 842 aa23.81■■□□□ 1.4
TRIM58-201ENST00000366481 MAP4K4O95819 1239 aaPredicted RBP23.81■■□□□ 1.4
TRIM58-201ENST00000366481 NEK4P51957 841 aa23.8■■□□□ 1.4
TRIM58-201ENST00000366481 PNMA6EA0A0J9YXQ4 647 aa23.8■■□□□ 1.4
TRIM58-201ENST00000366481 HDGFP51858 240 aaKnown RBP23.8■■□□□ 1.4
TRIM58-201ENST00000366481 NLRP6P59044 892 aa23.8■■□□□ 1.4
TRIM58-201ENST00000366481 IL1RAPL2Q9NP60 686 aa23.8■■□□□ 1.4
TRIM58-201ENST00000366481 DLG5Q8TDM6 1919 aa23.8■■□□□ 1.4
TRIM58-201ENST00000366481 KNDC1Q76NI1 1749 aa23.8■■□□□ 1.4
TRIM58-201ENST00000366481 SPDYE4A6NLX3 237 aa23.79■■□□□ 1.4
TRIM58-201ENST00000366481 AMOTL2Q9Y2J4 779 aa23.79■■□□□ 1.4
TRIM58-201ENST00000366481 MBD3O95983 291 aa23.78■■□□□ 1.4
TRIM58-201ENST00000366481 PPP4R3BQ5MIZ7 849 aa23.78■■□□□ 1.4
TRIM58-201ENST00000366481 SYAP1Q96A49 352 aaPredicted RBP23.78■■□□□ 1.4
TRIM58-201ENST00000366481 TTC12Q9H892 705 aaPredicted RBP23.78■■□□□ 1.4
TRIM58-201ENST00000366481 PDE1AP54750 535 aa23.77■■□□□ 1.4
TRIM58-201ENST00000366481 STK31Q9BXU1 1019 aa23.77■■□□□ 1.4
TRIM58-201ENST00000366481 USP25Q9UHP3 1055 aa23.77■■□□□ 1.4
TRIM58-201ENST00000366481 IGSF3O75054 1194 aa23.77■■□□□ 1.4
TRIM58-201ENST00000366481 DLC1Q96QB1 1528 aa23.77■■□□□ 1.4
TRIM58-201ENST00000366481 EIF2S2P20042 333 aaKnown RBP23.76■■□□□ 1.39
TRIM58-201ENST00000366481 LMOD2Q6P5Q4 547 aa23.76■■□□□ 1.39
TRIM58-201ENST00000366481 TNRQ92752 1358 aa23.76■■□□□ 1.39
TRIM58-201ENST00000366481 ANO2Q9NQ90 1003 aa23.75■■□□□ 1.39
TRIM58-201ENST00000366481 ZDHHC9Q9Y397 364 aa23.75■■□□□ 1.39
TRIM58-201ENST00000366481 ANXA1P04083 346 aa23.74■■□□□ 1.39
TRIM58-201ENST00000366481 UPF3BQ9BZI7 483 aaKnown RBP23.74■■□□□ 1.39
TRIM58-201ENST00000366481 TMEM2Q9UHN6 1383 aa23.74■■□□□ 1.39
TRIM58-201ENST00000366481 HMMRO75330 724 aa23.74■■□□□ 1.39
TRIM58-201ENST00000366481 FLIIQ13045 1269 aa23.74■■□□□ 1.39
TRIM58-201ENST00000366481 MYRIPQ8NFW9 859 aa23.74■■□□□ 1.39
TRIM58-201ENST00000366481 LARP6Q9BRS8 491 aaKnown RBP23.74■■□□□ 1.39
TRIM58-201ENST00000366481 PALD1Q9ULE6 856 aa23.74■■□□□ 1.39
TRIM58-201ENST00000366481 LRRFIP2Q9Y608 721 aaKnown RBP23.74■■□□□ 1.39
TRIM58-201ENST00000366481 REC8O95072 547 aa23.74■■□□□ 1.39
TRIM58-201ENST00000366481 PPP6R1Q9UPN7 881 aa23.74■■□□□ 1.39
TRIM58-201ENST00000366481 NOLC1Q14978 699 aaKnown RBP eCLIP23.73■■□□□ 1.39
TRIM58-201ENST00000366481 UNC5CLQ8IV45 518 aa23.73■■□□□ 1.39
TRIM58-201ENST00000366481 KIF3AQ9Y496 699 aa23.73■■□□□ 1.39
TRIM58-201ENST00000366481 PTPRCP08575 1304 aa23.73■■□□□ 1.39
TRIM58-201ENST00000366481 GNAI2P04899 355 aa23.73■■□□□ 1.39
TRIM58-201ENST00000366481 CYP2E1P05181 493 aaPredicted RBP23.73■■□□□ 1.39
TRIM58-201ENST00000366481 HMGN5P82970 282 aaKnown RBP23.73■■□□□ 1.39
TRIM58-201ENST00000366481 EID1Q9Y6B2 187 aa23.73■■□□□ 1.39
TRIM58-201ENST00000366481 ERC2O15083 957 aa23.72■■□□□ 1.39
TRIM58-201ENST00000366481 NUTM1Q86Y26 1132 aa23.72■■□□□ 1.39
TRIM58-201ENST00000366481 DMTNQ08495 405 aa23.72■■□□□ 1.39
TRIM58-201ENST00000366481 NRXN3Q9Y4C0 1643 aa23.72■■□□□ 1.39
TRIM58-201ENST00000366481 PHAXQ9H814 394 aaKnown RBP23.72■■□□□ 1.39
TRIM58-201ENST00000366481 CRB1P82279 1406 aa23.71■■□□□ 1.39
TRIM58-201ENST00000366481 CHAF1AQ13111 956 aaPredicted RBP23.71■■□□□ 1.39
TRIM58-201ENST00000366481 SPATA31D1Q6ZQQ2 1576 aa23.71■■□□□ 1.39
TRIM58-201ENST00000366481 HAP1P54257 671 aaPredicted RBP23.71■■□□□ 1.39
TRIM58-201ENST00000366481 USP6P35125 1406 aa23.7■■□□□ 1.39
TRIM58-201ENST00000366481 PLEKHG3A1L390 1219 aa23.7■■□□□ 1.38
TRIM58-201ENST00000366481 PHF14O94880 888 aa23.7■■□□□ 1.38
TRIM58-201ENST00000366481 BCL11BQ9C0K0 894 aaPredicted RBP23.69■■□□□ 1.38
TRIM58-201ENST00000366481 TMX3Q96JJ7 454 aa23.69■■□□□ 1.38
TRIM58-201ENST00000366481 IL25Q9H293 177 aa23.69■■□□□ 1.38
TRIM58-201ENST00000366481 ZSCAN20P17040 1043 aaPredicted RBP23.68■■□□□ 1.38
TRIM58-201ENST00000366481 IL17REQ8NFR9 667 aa23.68■■□□□ 1.38
TRIM58-201ENST00000366481 DIP2BQ9P265 1576 aa23.68■■□□□ 1.38
TRIM58-201ENST00000366481 ABTB2Q8N961 1025 aa23.68■■□□□ 1.38
TRIM58-201ENST00000366481 LRRCC1Q9C099 1032 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms