RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 HOMER1Q86YM7 354 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 PDCL2Q8N4E4 241 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 NEUROD6Q96NK8 337 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 ATP10AO60312 1499 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 WASLO00401 505 aaPredicted RBP16.31■□□□□ 0.2
SGMS1-202ENST00000361781 STX6O43752 255 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 KRT85P78386 507 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 SDF4Q9BRK5 362 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 NSFL1CQ9UNZ2 370 aaKnown RBP16.31■□□□□ 0.2
SGMS1-202ENST00000361781 ABCC2Q92887 1545 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 MAST1Q9Y2H9 1570 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 PPIP5K1Q6PFW1 1433 aa16.3■□□□□ 0.2
SGMS1-202ENST00000361781 C1orf141Q5JVX7 400 aa16.3■□□□□ 0.2
SGMS1-202ENST00000361781 PPP4R3BQ5MIZ7 849 aa16.3■□□□□ 0.2
SGMS1-202ENST00000361781 TRPM1Q7Z4N2 1603 aa16.3■□□□□ 0.2
SGMS1-202ENST00000361781 NOLC1Q14978 699 aaKnown RBP eCLIP16.3■□□□□ 0.2
SGMS1-202ENST00000361781 PPP1R42Q7Z4L9 355 aa16.3■□□□□ 0.2
SGMS1-202ENST00000361781 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
SGMS1-202ENST00000361781 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
SGMS1-202ENST00000361781 PALD1Q9ULE6 856 aa16.3■□□□□ 0.2
SGMS1-202ENST00000361781 NOL7Q9UMY1 257 aaKnown RBP16.3■□□□□ 0.2
SGMS1-202ENST00000361781 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
SGMS1-202ENST00000361781 FAM173BQ6P4H8 233 aa16.3■□□□□ 0.2
SGMS1-202ENST00000361781 CCDC8Q9H0W5 538 aaPredicted RBP16.3■□□□□ 0.2
SGMS1-202ENST00000361781 STK11IPQ8N1F8 1099 aa16.29■□□□□ 0.2
SGMS1-202ENST00000361781 SPATA32Q96LK8 384 aa16.29■□□□□ 0.2
SGMS1-202ENST00000361781 BOLA2Q9H3K6 86 aa16.29■□□□□ 0.2
SGMS1-202ENST00000361781 MSH6P52701 1360 aa16.29■□□□□ 0.2
SGMS1-202ENST00000361781 GJB2P29033 226 aa16.29■□□□□ 0.2
SGMS1-202ENST00000361781 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
SGMS1-202ENST00000361781 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
SGMS1-202ENST00000361781 HSP90AB4PQ58FF6 505 aa16.29■□□□□ 0.2
SGMS1-202ENST00000361781 LIMCH1Q9UPQ0 1083 aa16.29■□□□□ 0.2
SGMS1-202ENST00000361781 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
SGMS1-202ENST00000361781 CCDC73Q6ZRK6 1079 aa16.28■□□□□ 0.2
SGMS1-202ENST00000361781 LETM1O95202 739 aaPredicted RBP16.28■□□□□ 0.2
SGMS1-202ENST00000361781 ZNF445P59923 1031 aa16.28■□□□□ 0.2
SGMS1-202ENST00000361781 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
SGMS1-202ENST00000361781 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
SGMS1-202ENST00000361781 BLOC1S2Q6QNY1 142 aa16.27■□□□□ 0.2
SGMS1-202ENST00000361781 DYNC1I1O14576 645 aa16.27■□□□□ 0.19
SGMS1-202ENST00000361781 NEXNQ0ZGT2 675 aa16.27■□□□□ 0.19
SGMS1-202ENST00000361781 TOMM22Q9NS69 142 aa16.27■□□□□ 0.19
SGMS1-202ENST00000361781 MAP3K11Q16584 847 aa16.27■□□□□ 0.19
SGMS1-202ENST00000361781 TRMT1Q9NXH9 659 aaKnown RBP16.27■□□□□ 0.19
SGMS1-202ENST00000361781 PNMA6EA0A0J9YXQ4 647 aa16.26■□□□□ 0.19
SGMS1-202ENST00000361781 GUCY1B3Q02153 619 aa16.26■□□□□ 0.19
SGMS1-202ENST00000361781 MYL6BP14649 208 aa16.26■□□□□ 0.19
SGMS1-202ENST00000361781 CCDC112Q8NEF3 446 aa16.26■□□□□ 0.19
SGMS1-202ENST00000361781 JARID2Q92833 1246 aaPredicted RBP16.26■□□□□ 0.19
SGMS1-202ENST00000361781 CD109Q6YHK3 1445 aa16.26■□□□□ 0.19
SGMS1-202ENST00000361781 CHMLP26374 656 aa16.26■□□□□ 0.19
SGMS1-202ENST00000361781 KIF1BPQ96EK5 621 aa16.25■□□□□ 0.19
SGMS1-202ENST00000361781 PPP1R9BQ96SB3 815 aa16.25■□□□□ 0.19
SGMS1-202ENST00000361781 HDAC5Q9UQL6 1122 aa16.25■□□□□ 0.19
SGMS1-202ENST00000361781 PTPRCP08575 1304 aa16.25■□□□□ 0.19
SGMS1-202ENST00000361781 FAM177A1Q8N128 213 aaPredicted RBP16.25■□□□□ 0.19
SGMS1-202ENST00000361781 KIF2CQ99661 725 aa16.25■□□□□ 0.19
SGMS1-202ENST00000361781 PI4KAP2A4QPH2 592 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 PI4KAP1Q8N8J0 262 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 ZSCAN22P10073 491 aaPredicted RBP16.24■□□□□ 0.19
SGMS1-202ENST00000361781 PDCP20941 246 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 IL13P35225 146 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 AK2P54819 239 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.24■□□□□ 0.19
SGMS1-202ENST00000361781 V9GYY5 206 aaPredicted RBP16.24■□□□□ 0.19
SGMS1-202ENST00000361781 ZNF518AQ6AHZ1 1483 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 SMC2O95347 1197 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 PSMA5P28066 241 aa16.24■□□□□ 0.19
SGMS1-202ENST00000361781 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
SGMS1-202ENST00000361781 TAF7LQ5H9L4 462 aa16.23■□□□□ 0.19
SGMS1-202ENST00000361781 RHPN1Q8TCX5 695 aa16.23■□□□□ 0.19
SGMS1-202ENST00000361781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.23■□□□□ 0.197e-9■■■□□ 17.9
SGMS1-202ENST00000361781 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
SGMS1-202ENST00000361781 POLR1AO95602 1720 aaPredicted RBP16.23■□□□□ 0.19
SGMS1-202ENST00000361781 KDM5AP29375 1690 aaKnown RBP16.23■□□□□ 0.19
SGMS1-202ENST00000361781 KINO60870 393 aaKnown RBP16.23■□□□□ 0.19
SGMS1-202ENST00000361781 ME1P48163 572 aa16.23■□□□□ 0.19
SGMS1-202ENST00000361781 UBE2HP62256 183 aa16.23■□□□□ 0.19
SGMS1-202ENST00000361781 SYT1P21579 422 aa16.23■□□□□ 0.19
SGMS1-202ENST00000361781 TPM4P67936 248 aa16.23■□□□□ 0.19
SGMS1-202ENST00000361781 PSME1Q06323 249 aa16.23■□□□□ 0.19
SGMS1-202ENST00000361781 LRRC2Q9BYS8 371 aa16.23■□□□□ 0.19
SGMS1-202ENST00000361781 CPLX1O14810 134 aa16.22■□□□□ 0.19
SGMS1-202ENST00000361781 ZNF530Q6P9A1 599 aaPredicted RBP16.22■□□□□ 0.19
SGMS1-202ENST00000361781 CCDC186Q7Z3E2 898 aa16.22■□□□□ 0.19
SGMS1-202ENST00000361781 PA2G4Q9UQ80 394 aaKnown RBP16.22■□□□□ 0.19
SGMS1-202ENST00000361781 SYNMO15061 1565 aa16.22■□□□□ 0.19
SGMS1-202ENST00000361781 ERICH4A6NGS2 130 aa16.22■□□□□ 0.19
SGMS1-202ENST00000361781 MCM5P33992 734 aa16.22■□□□□ 0.19
SGMS1-202ENST00000361781 PHAXQ9H814 394 aaKnown RBP16.22■□□□□ 0.19
SGMS1-202ENST00000361781 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
SGMS1-202ENST00000361781 ZBTB9Q96C00 473 aa16.21■□□□□ 0.19
SGMS1-202ENST00000361781 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
SGMS1-202ENST00000361781 ACEP12821 1306 aa16.21■□□□□ 0.19
SGMS1-202ENST00000361781 GLRX3O76003 335 aaKnown RBP16.21■□□□□ 0.19
SGMS1-202ENST00000361781 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms