RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PIBF1Q8WXW3 757 aa18.83■□□□□ 0.61
CLSTN1-201ENST00000361311 FEZ1Q99689 392 aa18.83■□□□□ 0.61
CLSTN1-201ENST00000361311 MBIPQ9NS73 344 aa18.83■□□□□ 0.61
CLSTN1-201ENST00000361311 H0YHG0 523 aa18.83■□□□□ 0.6
CLSTN1-201ENST00000361311 RUFY1Q96T51 708 aa18.83■□□□□ 0.6
CLSTN1-201ENST00000361311 RALYLQ86SE5 291 aaKnown RBP18.83■□□□□ 0.6
CLSTN1-201ENST00000361311 ZMYM3Q14202 1370 aa18.82■□□□□ 0.6
CLSTN1-201ENST00000361311 DDX11Q96FC9 970 aa18.82■□□□□ 0.6
CLSTN1-201ENST00000361311 URI1O94763 535 aaPredicted RBP18.82■□□□□ 0.6
CLSTN1-201ENST00000361311 ANKRD44Q8N8A2 993 aa18.82■□□□□ 0.6
CLSTN1-201ENST00000361311 NSD2O96028 1365 aa18.82■□□□□ 0.6
CLSTN1-201ENST00000361311 EIF3JO75822 258 aaKnown RBP18.82■□□□□ 0.6
CLSTN1-201ENST00000361311 AKAP17AQ02040 695 aaKnown RBP18.82■□□□□ 0.6
CLSTN1-201ENST00000361311 ANO10Q9NW15 660 aa18.82■□□□□ 0.6
CLSTN1-201ENST00000361311 ERLIN1O75477 346 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 MCM10Q7L590 875 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 RAB11FIP3O75154 756 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 KDM4AO75164 1064 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 MIS18AQ9NYP9 233 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 USP19O94966 1318 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 PDE1AP54750 535 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 ANAPC15P60006 121 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 RPGRIP1LQ68CZ1 1315 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 AIMP1Q12904 312 aaKnown RBP18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 C17orf53Q8N3J3 647 aaPredicted RBP18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 TSC1Q92574 1164 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 KIF1BPQ96EK5 621 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 NEUROD6Q96NK8 337 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 DCTPP1Q9H773 170 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 TMEM63CQ9P1W3 806 aa18.81■□□□□ 0.6
CLSTN1-201ENST00000361311 ESYT1Q9BSJ8 1104 aa18.8■□□□□ 0.6
CLSTN1-201ENST00000361311 OGFRQ9NZT2 677 aa18.8■□□□□ 0.6
CLSTN1-201ENST00000361311 GLRX3O76003 335 aaKnown RBP18.8■□□□□ 0.6
CLSTN1-201ENST00000361311 MRPL50Q8N5N7 158 aaKnown RBP18.8■□□□□ 0.6
CLSTN1-201ENST00000361311 APPP05067 770 aa18.8■□□□□ 0.6
CLSTN1-201ENST00000361311 CSB-PGBD3P0DP91 1061 aa18.8■□□□□ 0.6
CLSTN1-201ENST00000361311 DNAJC2Q99543 621 aaKnown RBP18.8■□□□□ 0.6
CLSTN1-201ENST00000361311 CBFA2T2O43439 604 aa18.79■□□□□ 0.6
CLSTN1-201ENST00000361311 PDE4CQ08493 712 aa18.79■□□□□ 0.6
CLSTN1-201ENST00000361311 SAFBQ15424 915 aaKnown RBP eCLIP18.79■□□□□ 0.6
CLSTN1-201ENST00000361311 TRMT2AQ8IZ69 625 aaKnown RBP18.79■□□□□ 0.6
CLSTN1-201ENST00000361311 SPG7Q9UQ90 795 aa18.79■□□□□ 0.6
CLSTN1-201ENST00000361311 NPC1L1Q9UHC9 1359 aa18.79■□□□□ 0.6
CLSTN1-201ENST00000361311 PCMTD1Q96MG8 357 aaPredicted RBP18.79■□□□□ 0.6
CLSTN1-201ENST00000361311 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.79■□□□□ 0.62e-6■■■□□ 15.7
CLSTN1-201ENST00000361311 V9GYY5 206 aaPredicted RBP18.79■□□□□ 0.6
CLSTN1-201ENST00000361311 PTGS1P23219 599 aa18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 U2AF2P26368 475 aaKnown RBP eCLIP18.78■□□□□ 0.69e-8■■■□□ 15.2
CLSTN1-201ENST00000361311 NFXL1Q6ZNB6 911 aa18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 AACSQ86V21 672 aa18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 INTS4Q96HW7 963 aaKnown RBP18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 MEIS3Q99687 375 aa18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 AXDND1Q5T1B0 1012 aaPredicted RBP18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 RIC3Q7Z5B4 369 aa18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 CCDC171Q6TFL3 1326 aa18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 ZNF521Q96K83 1311 aa18.78■□□□□ 0.6
CLSTN1-201ENST00000361311 CTTNBP2Q8WZ74 1663 aa18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 SMTNL1A8MU46 457 aa18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 RIOK3O14730 519 aaKnown RBP18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 SNW1Q13573 536 aaKnown RBP18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 CFAP100Q494V2 611 aa18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 PTPRCP08575 1304 aa18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 ZBTB7BO15156 539 aaPredicted RBP18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 GSDMDP57764 484 aa18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 ANO6Q4KMQ2 910 aa18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 EMILIN1Q9Y6C2 1016 aa18.77■□□□□ 0.6
CLSTN1-201ENST00000361311 CAVIN2O95810 425 aa18.77■□□□□ 0.59
CLSTN1-201ENST00000361311 KRT32Q14532 448 aa18.77■□□□□ 0.59
CLSTN1-201ENST00000361311 DEF6Q9H4E7 631 aa18.77■□□□□ 0.59
CLSTN1-201ENST00000361311 CTAGE5O15320 804 aa18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 DHX16O60231 1041 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 DNM1Q05193 864 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 JMYQ8N9B5 988 aa18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 F13A1P00488 732 aa18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 SKILP12757 684 aa18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 WASHC4Q2M389 1173 aa18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 CCDC102AQ96A19 550 aa18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 CAGE1Q8TC20 777 aa18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-201ENST00000361311 GCC2Q8IWJ2 1684 aa18.75■□□□□ 0.59
CLSTN1-201ENST00000361311 VAMP4O75379 141 aa18.75■□□□□ 0.59
CLSTN1-201ENST00000361311 DNMT1P26358 1616 aaKnown RBP18.75■□□□□ 0.59
CLSTN1-201ENST00000361311 FAM83GA6ND36 823 aa18.75■□□□□ 0.59
CLSTN1-201ENST00000361311 SIL1Q9H173 461 aa18.75■□□□□ 0.59
CLSTN1-201ENST00000361311 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
CLSTN1-201ENST00000361311 BRPF1P55201 1214 aaPredicted RBP18.74■□□□□ 0.59
CLSTN1-201ENST00000361311 FILIP1LQ4L180 1135 aa18.74■□□□□ 0.59
CLSTN1-201ENST00000361311 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
CLSTN1-201ENST00000361311 ZNF397Q8NF99 534 aaPredicted RBP18.74■□□□□ 0.59
CLSTN1-201ENST00000361311 DACT1Q9NYF0 836 aa18.74■□□□□ 0.59
CLSTN1-201ENST00000361311 TSPYL6Q8N831 410 aa18.74■□□□□ 0.59
CLSTN1-201ENST00000361311 ZSCAN12O43309 604 aa18.73■□□□□ 0.59
CLSTN1-201ENST00000361311 SMARCE1Q969G3 411 aa18.73■□□□□ 0.59
CLSTN1-201ENST00000361311 TYRO3Q06418 890 aa18.73■□□□□ 0.59
CLSTN1-201ENST00000361311 STX1AQ16623 288 aa18.73■□□□□ 0.59
CLSTN1-201ENST00000361311 PPFIBP1Q86W92 1011 aa18.73■□□□□ 0.59
CLSTN1-201ENST00000361311 BCL2L12Q9HB09 334 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms