RNA–Protein interactions for RNA: ENST00000359632.7

HPS1-203, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 978 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-203ENST00000359632 SMC1BQ8NDV3 1235 aa18.05■□□□□ 0.48
HPS1-203ENST00000359632 RRAGCQ9HB90 399 aa18.05■□□□□ 0.48
HPS1-203ENST00000359632 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
HPS1-203ENST00000359632 FCHSD2O94868 740 aa18.04■□□□□ 0.48
HPS1-203ENST00000359632 MMP10P09238 476 aa18.04■□□□□ 0.48
HPS1-203ENST00000359632 MPRIPQ6WCQ1 1025 aa18.04■□□□□ 0.48
HPS1-203ENST00000359632 KIAA1551Q9HCM1 1747 aa18.03■□□□□ 0.48
HPS1-203ENST00000359632 SSFA2P28290 1259 aa18.03■□□□□ 0.48
HPS1-203ENST00000359632 TGFB2P61812 414 aa18.03■□□□□ 0.48
HPS1-203ENST00000359632 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
HPS1-203ENST00000359632 KIF13BQ9NQT8 1826 aa18.01■□□□□ 0.47
HPS1-203ENST00000359632 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
HPS1-203ENST00000359632 PANK3Q9H999 370 aa18.01■□□□□ 0.47
HPS1-203ENST00000359632 RTL1A6NKG5 1358 aa18.01■□□□□ 0.47
HPS1-203ENST00000359632 PKD1L3Q7Z443 1732 aa18.01■□□□□ 0.47
HPS1-203ENST00000359632 DPEP1P16444 411 aa18■□□□□ 0.47
HPS1-203ENST00000359632 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
HPS1-203ENST00000359632 RNF181Q9P0P0 153 aa18■□□□□ 0.47
HPS1-203ENST00000359632 INSRP06213 1382 aa18■□□□□ 0.47
HPS1-203ENST00000359632 ANKRD26Q9UPS8 1709 aa17.99■□□□□ 0.47
HPS1-203ENST00000359632 SMARCC1Q92922 1105 aaPredicted RBP17.99■□□□□ 0.47
HPS1-203ENST00000359632 PCDH10Q9P2E7 1040 aa17.99■□□□□ 0.47
HPS1-203ENST00000359632 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
HPS1-203ENST00000359632 CGNL1Q0VF96 1302 aa17.98■□□□□ 0.47
HPS1-203ENST00000359632 GNPATO15228 680 aa17.98■□□□□ 0.47
HPS1-203ENST00000359632 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
HPS1-203ENST00000359632 FLT4P35916 1363 aa17.98■□□□□ 0.47
HPS1-203ENST00000359632 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
HPS1-203ENST00000359632 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
HPS1-203ENST00000359632 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.46
HPS1-203ENST00000359632 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.46
HPS1-203ENST00000359632 TATP17735 454 aaPredicted RBP17.94■□□□□ 0.46
HPS1-203ENST00000359632 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
HPS1-203ENST00000359632 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
HPS1-203ENST00000359632 SMG6Q86US8 1419 aaKnown RBP17.94■□□□□ 0.46
HPS1-203ENST00000359632 BRCA1P38398 1863 aaKnown RBP17.94■□□□□ 0.46
HPS1-203ENST00000359632 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
HPS1-203ENST00000359632 LOC102724428A0A0B4J2F2 783 aa17.93■□□□□ 0.46
HPS1-203ENST00000359632 SIK1P57059 783 aa17.93■□□□□ 0.46
HPS1-203ENST00000359632 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
HPS1-203ENST00000359632 ARFGEF1Q9Y6D6 1849 aa17.93■□□□□ 0.46
HPS1-203ENST00000359632 PIGBQ92521 554 aa17.92■□□□□ 0.46
HPS1-203ENST00000359632 EYA1Q99502 592 aa17.92■□□□□ 0.46
HPS1-203ENST00000359632 ITGB4P16144 1822 aa17.91■□□□□ 0.46
HPS1-203ENST00000359632 KCNA3P22001 575 aa17.91■□□□□ 0.46
HPS1-203ENST00000359632 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
HPS1-203ENST00000359632 FOXN1O15353 648 aa17.9■□□□□ 0.46
HPS1-203ENST00000359632 CYP27B1O15528 508 aa17.9■□□□□ 0.46
HPS1-203ENST00000359632 ITPK1Q13572 414 aa17.9■□□□□ 0.46
HPS1-203ENST00000359632 NLGN1Q8N2Q7 840 aa17.9■□□□□ 0.46
HPS1-203ENST00000359632 PIM2Q9P1W9 311 aa17.9■□□□□ 0.46
HPS1-203ENST00000359632 KIF7Q2M1P5 1343 aa17.9■□□□□ 0.46
HPS1-203ENST00000359632 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
HPS1-203ENST00000359632 DALRD3Q5D0E6 543 aaKnown RBP17.89■□□□□ 0.45
HPS1-203ENST00000359632 MKRN1Q9UHC7 482 aaKnown RBP17.89■□□□□ 0.45
HPS1-203ENST00000359632 C4AP0C0L4 1744 aa17.89■□□□□ 0.45
HPS1-203ENST00000359632 VEGFAP15692 232 aaPredicted RBP17.88■□□□□ 0.45
HPS1-203ENST00000359632 ATP6V1AP38606 617 aa17.88■□□□□ 0.45
HPS1-203ENST00000359632 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
HPS1-203ENST00000359632 TRAPPC3LQ5T215 181 aa17.87■□□□□ 0.45
HPS1-203ENST00000359632 PRDM10Q9NQV6 1147 aa17.87■□□□□ 0.45
HPS1-203ENST00000359632 NCAPD2Q15021 1401 aa17.87■□□□□ 0.45
HPS1-203ENST00000359632 RASSF7Q02833 373 aa17.86■□□□□ 0.45
HPS1-203ENST00000359632 MORC1Q86VD1 984 aa17.86■□□□□ 0.45
HPS1-203ENST00000359632 RTCBQ9Y3I0 505 aaKnown RBP17.86■□□□□ 0.45
HPS1-203ENST00000359632 SBF1O95248 1867 aa17.86■□□□□ 0.45
HPS1-203ENST00000359632 ASAP1Q9ULH1 1129 aa17.85■□□□□ 0.45
HPS1-203ENST00000359632 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
HPS1-203ENST00000359632 GYS1P13807 737 aa17.84■□□□□ 0.45
HPS1-203ENST00000359632 AMER1Q5JTC6 1135 aaPredicted RBP17.84■□□□□ 0.45
HPS1-203ENST00000359632 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
HPS1-203ENST00000359632 GLTPD2A6NH11 291 aa17.83■□□□□ 0.44
HPS1-203ENST00000359632 TMOD3Q9NYL9 352 aa17.83■□□□□ 0.44
HPS1-203ENST00000359632 PER1O15534 1290 aaPredicted RBP17.82■□□□□ 0.44
HPS1-203ENST00000359632 CHRNA5P30532 468 aa17.82■□□□□ 0.44
HPS1-203ENST00000359632 CTCFP49711 727 aaPredicted RBP17.82■□□□□ 0.44
HPS1-203ENST00000359632 ARHGEF1Q92888 912 aaKnown RBP17.82■□□□□ 0.44
HPS1-203ENST00000359632 AIDAQ96BJ3 306 aa17.82■□□□□ 0.44
HPS1-203ENST00000359632 CREBZFQ9NS37 354 aa17.82■□□□□ 0.44
HPS1-203ENST00000359632 RFC4P35249 363 aa17.81■□□□□ 0.44
HPS1-203ENST00000359632 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
HPS1-203ENST00000359632 ABHD8Q96I13 439 aa17.81■□□□□ 0.44
HPS1-203ENST00000359632 SPG7Q9UQ90 795 aa17.8■□□□□ 0.44
HPS1-203ENST00000359632 NKX1-1Q15270 411 aaPredicted RBP17.79■□□□□ 0.44
HPS1-203ENST00000359632 AEBP1Q8IUX7 1158 aa17.79■□□□□ 0.44
HPS1-203ENST00000359632 KDM6AO15550 1401 aaPredicted RBP17.79■□□□□ 0.44
HPS1-203ENST00000359632 ADRA2BP18089 450 aa17.78■□□□□ 0.44
HPS1-203ENST00000359632 LMNB1P20700 586 aa17.78■□□□□ 0.44
HPS1-203ENST00000359632 LBX1P52954 281 aa17.78■□□□□ 0.44
HPS1-203ENST00000359632 MLLT1Q03111 559 aaPredicted RBP17.78■□□□□ 0.44
HPS1-203ENST00000359632 CC2D1BQ5T0F9 858 aaKnown RBP17.78■□□□□ 0.44
HPS1-203ENST00000359632 ATG3Q9NT62 314 aa17.78■□□□□ 0.44
HPS1-203ENST00000359632 CNTNAP1P78357 1384 aa17.78■□□□□ 0.44
HPS1-203ENST00000359632 PHKG2P15735 406 aa17.77■□□□□ 0.44
HPS1-203ENST00000359632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.77■□□□□ 0.44
HPS1-203ENST00000359632 POTECB2RU33 542 aa17.76■□□□□ 0.43
HPS1-203ENST00000359632 KDRP35968 1356 aa17.76■□□□□ 0.43
HPS1-203ENST00000359632 TIAM2Q8IVF5 1701 aa17.75■□□□□ 0.43
HPS1-203ENST00000359632 IL13P35225 146 aa17.75■□□□□ 0.43
HPS1-203ENST00000359632 MTHFSP49914 203 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms