RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 C1orf115Q9H7X2 142 aa23.32■■□□□ 1.32
SNX11-201ENST00000359238 DDX19BQ9UMR2 479 aa23.32■■□□□ 1.32
SNX11-201ENST00000359238 ABCC4O15439 1325 aa23.31■■□□□ 1.32
SNX11-201ENST00000359238 FAM208AQ9UK61 1670 aaKnown RBP23.31■■□□□ 1.32
SNX11-201ENST00000359238 KCNQ3O43525 872 aa23.31■■□□□ 1.32
SNX11-201ENST00000359238 PLEKHO1Q53GL0 409 aaPredicted RBP23.31■■□□□ 1.32
SNX11-201ENST00000359238 CEMIPQ8WUJ3 1361 aa23.31■■□□□ 1.32
SNX11-201ENST00000359238 ABCA3Q99758 1704 aa23.3■■□□□ 1.32
SNX11-201ENST00000359238 ZBTB7BO15156 539 aaPredicted RBP23.29■■□□□ 1.32
SNX11-201ENST00000359238 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
SNX11-201ENST00000359238 AMOTQ4VCS5 1084 aa23.28■■□□□ 1.32
SNX11-201ENST00000359238 SLC4A2P04920 1241 aa23.28■■□□□ 1.32
SNX11-201ENST00000359238 PIP4K2BP78356 416 aa23.28■■□□□ 1.32
SNX11-201ENST00000359238 TAF7Q15545 349 aaPredicted RBP23.28■■□□□ 1.32
SNX11-201ENST00000359238 RAPGEF4Q8WZA2 1011 aa23.28■■□□□ 1.32
SNX11-201ENST00000359238 ABCC6O95255 1503 aa23.28■■□□□ 1.32
SNX11-201ENST00000359238 MEGF6O75095 1541 aa23.27■■□□□ 1.32
SNX11-201ENST00000359238 AKAP4Q5JQC9 854 aa23.27■■□□□ 1.32
SNX11-201ENST00000359238 CLCN1P35523 988 aa23.26■■□□□ 1.31
SNX11-201ENST00000359238 C1orf141Q5JVX7 400 aa23.26■■□□□ 1.31
SNX11-201ENST00000359238 ANTXR1Q9H6X2 564 aa23.25■■□□□ 1.31
SNX11-201ENST00000359238 PDZRN3Q9UPQ7 1066 aa23.25■■□□□ 1.31
SNX11-201ENST00000359238 AHDC1Q5TGY3 1603 aaPredicted RBP23.25■■□□□ 1.31
SNX11-201ENST00000359238 KDM3BQ7LBC6 1761 aa23.24■■□□□ 1.31
SNX11-201ENST00000359238 STRN4Q9NRL3 753 aa23.24■■□□□ 1.31
SNX11-201ENST00000359238 F6X3S4 739 aa23.24■■□□□ 1.31
SNX11-201ENST00000359238 TATP17735 454 aaPredicted RBP23.24■■□□□ 1.31
SNX11-201ENST00000359238 TOM1L2Q6ZVM7 507 aa23.24■■□□□ 1.31
SNX11-201ENST00000359238 COL5A2P05997 1499 aaPredicted RBP23.23■■□□□ 1.31
SNX11-201ENST00000359238 RRP9O43818 475 aaKnown RBP23.23■■□□□ 1.31
SNX11-201ENST00000359238 AAMPQ13685 434 aa23.23■■□□□ 1.31
SNX11-201ENST00000359238 WDR17Q8IZU2 1322 aa23.23■■□□□ 1.31
SNX11-201ENST00000359238 FSD2A1L4K1 749 aa23.22■■□□□ 1.31
SNX11-201ENST00000359238 RNMTO43148 476 aaKnown RBP23.22■■□□□ 1.31
SNX11-201ENST00000359238 XRCC6P12956 609 aaKnown RBP eCLIP23.21■■□□□ 1.31
SNX11-201ENST00000359238 SIRT2Q8IXJ6 389 aa23.21■■□□□ 1.31
SNX11-201ENST00000359238 NAP1L5Q96NT1 182 aaPredicted RBP23.21■■□□□ 1.31
SNX11-201ENST00000359238 RWDD1Q9H446 243 aaPredicted RBP23.21■■□□□ 1.31
SNX11-201ENST00000359238 GOLGA6L3A6NEY3 463 aa23.21■■□□□ 1.31
SNX11-201ENST00000359238 SLKQ9H2G2 1235 aaPredicted RBP23.21■■□□□ 1.31
SNX11-201ENST00000359238 API5Q9BZZ5 524 aaKnown RBP23.2■■□□□ 1.3
SNX11-201ENST00000359238 TOM1O60784 492 aa23.2■■□□□ 1.3
SNX11-201ENST00000359238 HSP90AA1P07900 732 aaKnown RBP23.19■■□□□ 1.3
SNX11-201ENST00000359238 TEFQ10587 303 aa23.19■■□□□ 1.3
SNX11-201ENST00000359238 HSP90AA2PQ14568 343 aaPredicted RBP23.19■■□□□ 1.3
SNX11-201ENST00000359238 LARP1Q6PKG0 1096 aaKnown RBP23.19■■□□□ 1.3
SNX11-201ENST00000359238 SIPA1L3O60292 1781 aaPredicted RBP23.19■■□□□ 1.3
SNX11-201ENST00000359238 PRAMEF22A3QJZ6 481 aa23.19■■□□□ 1.3
SNX11-201ENST00000359238 EIF4A1P60842 406 aaKnown RBP23.19■■□□□ 1.3
SNX11-201ENST00000359238 HDAC1Q13547 482 aaPredicted RBP23.19■■□□□ 1.3
SNX11-201ENST00000359238 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
SNX11-201ENST00000359238 SEC24BO95487 1268 aa23.18■■□□□ 1.3
SNX11-201ENST00000359238 EVA1CP58658 441 aa23.18■■□□□ 1.3
SNX11-201ENST00000359238 VSIG10Q8N0Z9 540 aa23.18■■□□□ 1.3
SNX11-201ENST00000359238 ZMYND15Q9H091 742 aa23.18■■□□□ 1.3
SNX11-201ENST00000359238 BTG4Q9NY30 223 aa23.17■■□□□ 1.3
SNX11-201ENST00000359238 SPG7Q9UQ90 795 aa23.17■■□□□ 1.3
SNX11-201ENST00000359238 KDM6AO15550 1401 aaPredicted RBP23.17■■□□□ 1.3
SNX11-201ENST00000359238 BTBD11A6QL63 1104 aa23.16■■□□□ 1.3
SNX11-201ENST00000359238 UBAP1LF5GYI3 381 aa23.16■■□□□ 1.3
SNX11-201ENST00000359238 INTS3Q68E01 1043 aaKnown RBP23.16■■□□□ 1.3
SNX11-201ENST00000359238 ADAMTS7Q9UKP4 1686 aa23.16■■□□□ 1.3
SNX11-201ENST00000359238 PHAXQ9H814 394 aaKnown RBP23.16■■□□□ 1.3
SNX11-201ENST00000359238 ANXA1P04083 346 aa23.15■■□□□ 1.3
SNX11-201ENST00000359238 PHKG2P15735 406 aa23.15■■□□□ 1.3
SNX11-201ENST00000359238 EIF2S2P20042 333 aaKnown RBP23.15■■□□□ 1.3
SNX11-201ENST00000359238 PHLPP1O60346 1717 aa23.15■■□□□ 1.3
SNX11-201ENST00000359238 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.3
SNX11-201ENST00000359238 SLC4A10Q6U841 1118 aa23.14■■□□□ 1.3
SNX11-201ENST00000359238 MEIS3Q99687 375 aa23.14■■□□□ 1.3
SNX11-201ENST00000359238 COL16A1Q07092 1604 aaPredicted RBP23.14■■□□□ 1.29
SNX11-201ENST00000359238 PTPRCP08575 1304 aa23.14■■□□□ 1.29
SNX11-201ENST00000359238 CYP27B1O15528 508 aa23.14■■□□□ 1.29
SNX11-201ENST00000359238 SMC5Q8IY18 1101 aa23.14■■□□□ 1.29
SNX11-201ENST00000359238 FLIIQ13045 1269 aa23.13■■□□□ 1.29
SNX11-201ENST00000359238 BABAM1Q9NWV8 329 aa23.13■■□□□ 1.29
SNX11-201ENST00000359238 SLC39A6Q13433 755 aa23.13■■□□□ 1.29
SNX11-201ENST00000359238 HDGFL1Q5TGJ6 251 aa23.13■■□□□ 1.29
SNX11-201ENST00000359238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.13■■□□□ 1.29
SNX11-201ENST00000359238 ADAMTS2O95450 1211 aa23.12■■□□□ 1.29
SNX11-201ENST00000359238 CARD10Q9BWT7 1032 aa23.12■■□□□ 1.29
SNX11-201ENST00000359238 OVOS2A0A0G2JMS6 1433 aa23.12■■□□□ 1.29
SNX11-201ENST00000359238 CCDC30Q5VVM6 783 aa23.11■■□□□ 1.29
SNX11-201ENST00000359238 IFNL2Q8IZJ0 200 aa23.11■■□□□ 1.29
SNX11-201ENST00000359238 COL22A1Q8NFW1 1626 aaPredicted RBP23.11■■□□□ 1.29
SNX11-201ENST00000359238 STK31Q9BXU1 1019 aa23.11■■□□□ 1.29
SNX11-201ENST00000359238 PKD1L3Q7Z443 1732 aa23.1■■□□□ 1.29
SNX11-201ENST00000359238 ATP10DQ9P241 1426 aa23.1■■□□□ 1.29
SNX11-201ENST00000359238 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
SNX11-201ENST00000359238 MCM4P33991 863 aa23.1■■□□□ 1.29
SNX11-201ENST00000359238 FKBP5Q13451 457 aaPredicted RBP23.1■■□□□ 1.29
SNX11-201ENST00000359238 CHPF2Q9P2E5 772 aa23.1■■□□□ 1.29
SNX11-201ENST00000359238 NUTM2BA6NNL0 878 aaPredicted RBP23.09■■□□□ 1.29
SNX11-201ENST00000359238 NUTM2EB1AL46 878 aaPredicted RBP23.09■■□□□ 1.29
SNX11-201ENST00000359238 NUTM2AQ8IVF1 878 aaPredicted RBP23.09■■□□□ 1.29
SNX11-201ENST00000359238 TBC1D32Q96NH3 1257 aa23.09■■□□□ 1.29
SNX11-201ENST00000359238 UPF2Q9HAU5 1272 aaKnown RBP23.09■■□□□ 1.29
SNX11-201ENST00000359238 NFATC2IPQ8NCF5 419 aa23.09■■□□□ 1.29
SNX11-201ENST00000359238 TBC1D2Q9BYX2 928 aa23.09■■□□□ 1.29
SNX11-201ENST00000359238 IL2RBP14784 551 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms