RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 GTF2F1P35269 517 aaKnown RBP eCLIP16.92■□□□□ 0.3
NUP98-203ENST00000359171 POLR3GO15318 223 aaPredicted RBP16.92■□□□□ 0.3
NUP98-203ENST00000359171 YEATS4O95619 227 aa16.92■□□□□ 0.3
NUP98-203ENST00000359171 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
NUP98-203ENST00000359171 C16orf45Q96MC5 204 aaPredicted RBP16.91■□□□□ 0.3
NUP98-203ENST00000359171 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
NUP98-203ENST00000359171 HMGB1P09429 215 aaKnown RBP16.91■□□□□ 0.3
NUP98-203ENST00000359171 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
NUP98-203ENST00000359171 CCDC113Q9H0I3 377 aa16.91■□□□□ 0.3
NUP98-203ENST00000359171 CCDC175P0C221 793 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 NAA15Q9BXJ9 866 aaKnown RBP16.9■□□□□ 0.3
NUP98-203ENST00000359171 LIMCH1Q9UPQ0 1083 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 CCDC196A0A1B0GTZ2 297 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 ALDH1L2Q3SY69 923 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 CACNA2D4Q7Z3S7 1137 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 RNF187Q5TA31 235 aaPredicted RBP16.9■□□□□ 0.3
NUP98-203ENST00000359171 TSG101Q99816 390 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 FGFR1OPO95684 399 aaKnown RBP16.9■□□□□ 0.3
NUP98-203ENST00000359171 PPP4R3BQ5MIZ7 849 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 EXOC6BQ9Y2D4 811 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 NUTM1Q86Y26 1132 aa16.9■□□□□ 0.3
NUP98-203ENST00000359171 PAXBP1Q9Y5B6 917 aa16.89■□□□□ 0.29
NUP98-203ENST00000359171 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
NUP98-203ENST00000359171 AIDAQ96BJ3 306 aa16.89■□□□□ 0.29
NUP98-203ENST00000359171 CABP4P57796 275 aa16.89■□□□□ 0.29
NUP98-203ENST00000359171 KLHL40Q2TBA0 621 aa16.89■□□□□ 0.29
NUP98-203ENST00000359171 C8orf76Q96K31 380 aa16.89■□□□□ 0.29
NUP98-203ENST00000359171 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
NUP98-203ENST00000359171 KIF20AO95235 890 aa16.88■□□□□ 0.29
NUP98-203ENST00000359171 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
NUP98-203ENST00000359171 SPG7Q9UQ90 795 aa16.88■□□□□ 0.29
NUP98-203ENST00000359171 ATAD2BQ9ULI0 1458 aa16.88■□□□□ 0.29
NUP98-203ENST00000359171 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
NUP98-203ENST00000359171 SSR1P43307 286 aaKnown RBP16.88■□□□□ 0.29
NUP98-203ENST00000359171 TMPOP42166 694 aaKnown RBP16.88■□□□□ 0.29
NUP98-203ENST00000359171 STX1AQ16623 288 aa16.88■□□□□ 0.29
NUP98-203ENST00000359171 KLHL10Q6JEL2 608 aa16.87■□□□□ 0.29
NUP98-203ENST00000359171 RAI14Q9P0K7 980 aa16.87■□□□□ 0.29
NUP98-203ENST00000359171 FANCD2Q9BXW9 1451 aa16.87■□□□□ 0.29
NUP98-203ENST00000359171 GSTTP1A0A1W2PQM5 241 aa16.87■□□□□ 0.29
NUP98-203ENST00000359171 ATAD2Q6PL18 1390 aa16.87■□□□□ 0.29
NUP98-203ENST00000359171 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
NUP98-203ENST00000359171 ADCY5O95622 1261 aa16.87■□□□□ 0.29
NUP98-203ENST00000359171 SNW1Q13573 536 aaKnown RBP16.87■□□□□ 0.29
NUP98-203ENST00000359171 ALS2CR12Q96Q35 445 aa16.87■□□□□ 0.29
NUP98-203ENST00000359171 TRMT1Q9NXH9 659 aaKnown RBP16.87■□□□□ 0.29
NUP98-203ENST00000359171 GIGYF2Q6Y7W6 1299 aaKnown RBP16.87■□□□□ 0.29
NUP98-203ENST00000359171 SPECC1Q5M775 1068 aa16.87■□□□□ 0.29
NUP98-203ENST00000359171 STAMBPO95630 424 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 SPECC1LQ69YQ0 1117 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 CKAP2LQ8IYA6 745 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 CCDC150Q8NCX0 1101 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 NUP88Q99567 741 aaPredicted RBP16.86■□□□□ 0.29
NUP98-203ENST00000359171 RARSP54136 660 aaKnown RBP16.86■□□□□ 0.29
NUP98-203ENST00000359171 CDK19Q9BWU1 502 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 ZNF76P36508 570 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 CCDC178Q5BJE1 867 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 CTR9Q6PD62 1173 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 TAOK3Q9H2K8 898 aa16.86■□□□□ 0.29
NUP98-203ENST00000359171 IDH1O75874 414 aaKnown RBP16.86■□□□□ 0.29
NUP98-203ENST00000359171 NEBLO76041 1014 aa16.85■□□□□ 0.29
NUP98-203ENST00000359171 TIGD1Q96MW7 591 aa16.85■□□□□ 0.29
NUP98-203ENST00000359171 KRT222Q8N1A0 295 aa16.85■□□□□ 0.29
NUP98-203ENST00000359171 CLCN1P35523 988 aa16.85■□□□□ 0.29
NUP98-203ENST00000359171 LRP2BPQ9P2M1 347 aa16.85■□□□□ 0.29
NUP98-203ENST00000359171 TRERF1Q96PN7 1200 aa16.85■□□□□ 0.29
NUP98-203ENST00000359171 TICAM2Q86XR7 235 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 FSIP1Q8NA03 581 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 CNNM3Q8NE01 707 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 RAB34Q9BZG1 259 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 CCDC171Q6TFL3 1326 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 LMAN1P49257 510 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 ZNF165P49910 485 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 TMC6Q7Z403 805 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 AKAP2Q9Y2D5 859 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 MYL6BP14649 208 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 BAG4O95429 457 aaKnown RBP16.84■□□□□ 0.29
NUP98-203ENST00000359171 IBSPP21815 317 aaPredicted RBP16.84■□□□□ 0.29
NUP98-203ENST00000359171 ESCO1Q5FWF5 840 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
NUP98-203ENST00000359171 EHBP1Q8NDI1 1231 aa16.83■□□□□ 0.29
NUP98-203ENST00000359171 TDRD12Q587J7 1177 aaKnown RBP16.83■□□□□ 0.28
NUP98-203ENST00000359171 CEP135Q66GS9 1140 aa16.83■□□□□ 0.28
NUP98-203ENST00000359171 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.28
NUP98-203ENST00000359171 HOOK3Q86VS8 718 aa16.83■□□□□ 0.28
NUP98-203ENST00000359171 HLTFQ14527 1009 aaKnown RBP eCLIP16.82■□□□□ 0.285e-6■□□□□ 9.5
NUP98-203ENST00000359171 SSH1Q8WYL5 1049 aa16.82■□□□□ 0.28
NUP98-203ENST00000359171 BMP2KLQ5H9B9 411 aa16.82■□□□□ 0.28
NUP98-203ENST00000359171 ZHX1Q9UKY1 873 aaPredicted RBP16.82■□□□□ 0.28
NUP98-203ENST00000359171 STX6O43752 255 aa16.82■□□□□ 0.28
NUP98-203ENST00000359171 NF2P35240 595 aa16.82■□□□□ 0.28
NUP98-203ENST00000359171 UBE2HP62256 183 aa16.82■□□□□ 0.28
NUP98-203ENST00000359171 CPLX3Q8WVH0 158 aa16.82■□□□□ 0.28
NUP98-203ENST00000359171 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
NUP98-203ENST00000359171 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
NUP98-203ENST00000359171 CTCFLQ8NI51 663 aaPredicted RBP16.82■□□□□ 0.28
NUP98-203ENST00000359171 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms