RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 TMEM57Q8N5G2 664 aa14.14□□□□□ -0.15
ABCD4-201ENST00000356924 AAMPQ13685 434 aa14.13□□□□□ -0.15
ABCD4-201ENST00000356924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.13□□□□□ -0.151e-9■■□□□ 13.7
ABCD4-201ENST00000356924 COL14A1Q05707 1796 aaKnown RBP14.12□□□□□ -0.15
ABCD4-201ENST00000356924 KDM6AO15550 1401 aaPredicted RBP14.12□□□□□ -0.15
ABCD4-201ENST00000356924 CENPQQ7L2Z9 268 aaPredicted RBP14.12□□□□□ -0.15
ABCD4-201ENST00000356924 ABCC4O15439 1325 aa14.11□□□□□ -0.15
ABCD4-201ENST00000356924 RGS12O14924 1447 aa14.11□□□□□ -0.15
ABCD4-201ENST00000356924 PHKG2P15735 406 aa14.11□□□□□ -0.15
ABCD4-201ENST00000356924 SPG7Q9UQ90 795 aa14.11□□□□□ -0.15
ABCD4-201ENST00000356924 IGHDP01880 384 aa14.11□□□□□ -0.15
ABCD4-201ENST00000356924 PCDHB15Q9Y5E8 787 aa14.11□□□□□ -0.15
ABCD4-201ENST00000356924 SHANK3Q9BYB0 1731 aa14.1□□□□□ -0.15
ABCD4-201ENST00000356924 ITPRIPQ8IWB1 547 aa14.1□□□□□ -0.15
ABCD4-201ENST00000356924 KCNQ3O43525 872 aa14.1□□□□□ -0.15
ABCD4-201ENST00000356924 TEFQ10587 303 aa14.1□□□□□ -0.15
ABCD4-201ENST00000356924 TOM1L2Q6ZVM7 507 aa14.1□□□□□ -0.15
ABCD4-201ENST00000356924 USP35Q9P2H5 1018 aa14.1□□□□□ -0.15
ABCD4-201ENST00000356924 DDX19BQ9UMR2 479 aa14.1□□□□□ -0.15
ABCD4-201ENST00000356924 SOS1Q07889 1333 aaPredicted RBP14.1□□□□□ -0.15
ABCD4-201ENST00000356924 EIF4A1P60842 406 aaKnown RBP14.09□□□□□ -0.15
ABCD4-201ENST00000356924 LARP1Q6PKG0 1096 aaKnown RBP14.09□□□□□ -0.15
ABCD4-201ENST00000356924 CARD10Q9BWT7 1032 aa14.09□□□□□ -0.15
ABCD4-201ENST00000356924 API5Q9BZZ5 524 aaKnown RBP14.09□□□□□ -0.15
ABCD4-201ENST00000356924 CYP27B1O15528 508 aa14.09□□□□□ -0.15
ABCD4-201ENST00000356924 BTBD11A6QL63 1104 aa14.08□□□□□ -0.16
ABCD4-201ENST00000356924 IFNL2Q8IZJ0 200 aa14.08□□□□□ -0.16
ABCD4-201ENST00000356924 MRC1P22897 1456 aa14.08□□□□□ -0.16
ABCD4-201ENST00000356924 CACNA1FO60840 1977 aa14.08□□□□□ -0.16
ABCD4-201ENST00000356924 TOM1O60784 492 aa14.08□□□□□ -0.16
ABCD4-201ENST00000356924 STRN4Q9NRL3 753 aa14.08□□□□□ -0.16
ABCD4-201ENST00000356924 SLC4A2P04920 1241 aa14.07□□□□□ -0.16
ABCD4-201ENST00000356924 G2E3Q7L622 706 aa14.07□□□□□ -0.16
ABCD4-201ENST00000356924 ZBTB40Q9NUA8 1239 aa14.07□□□□□ -0.16
ABCD4-201ENST00000356924 SKAP1Q86WV1 359 aa14.07□□□□□ -0.16
ABCD4-201ENST00000356924 PTPRCP08575 1304 aa14.07□□□□□ -0.16
ABCD4-201ENST00000356924 EVA1CP58658 441 aa14.07□□□□□ -0.16
ABCD4-201ENST00000356924 PLCH1Q4KWH8 1693 aa14.06□□□□□ -0.16
ABCD4-201ENST00000356924 BTG4Q9NY30 223 aa14.06□□□□□ -0.16
ABCD4-201ENST00000356924 HEG1Q9ULI3 1381 aa14.06□□□□□ -0.16
ABCD4-201ENST00000356924 ZBTB7BO15156 539 aaPredicted RBP14.06□□□□□ -0.16
ABCD4-201ENST00000356924 PIP4K2BP78356 416 aa14.06□□□□□ -0.16
ABCD4-201ENST00000356924 CCDC30Q5VVM6 783 aa14.06□□□□□ -0.16
ABCD4-201ENST00000356924 SLC52A2Q9HAB3 445 aa14.05□□□□□ -0.16
ABCD4-201ENST00000356924 HOXB7P09629 217 aa14.04□□□□□ -0.16
ABCD4-201ENST00000356924 IL2RBP14784 551 aa14.04□□□□□ -0.16
ABCD4-201ENST00000356924 NRAPQ86VF7 1730 aa14.04□□□□□ -0.16
ABCD4-201ENST00000356924 ZCRB1Q8TBF4 217 aaKnown RBP14.04□□□□□ -0.16
ABCD4-201ENST00000356924 DCAF5Q96JK2 942 aa14.04□□□□□ -0.16
ABCD4-201ENST00000356924 INTS3Q68E01 1043 aaKnown RBP14.04□□□□□ -0.16
ABCD4-201ENST00000356924 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
ABCD4-201ENST00000356924 WNK3Q9BYP7 1800 aa14.03□□□□□ -0.16
ABCD4-201ENST00000356924 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
ABCD4-201ENST00000356924 HSP90AB1P08238 724 aaKnown RBP14.03□□□□□ -0.16
ABCD4-201ENST00000356924 HDGFL1Q5TGJ6 251 aa14.03□□□□□ -0.16
ABCD4-201ENST00000356924 C5P01031 1676 aa14.03□□□□□ -0.16
ABCD4-201ENST00000356924 N4BP2Q86UW6 1770 aaPredicted RBP14.03□□□□□ -0.16
ABCD4-201ENST00000356924 PCDH11XQ9BZA7 1347 aa14.03□□□□□ -0.16
ABCD4-201ENST00000356924 PCDH11YQ9BZA8 1340 aa14.03□□□□□ -0.16
ABCD4-201ENST00000356924 UBAP1LF5GYI3 381 aa14.02□□□□□ -0.16
ABCD4-201ENST00000356924 DISP2A7MBM2 1401 aa14.02□□□□□ -0.16
ABCD4-201ENST00000356924 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.17
ABCD4-201ENST00000356924 RWDD1Q9H446 243 aaPredicted RBP14.01□□□□□ -0.17
ABCD4-201ENST00000356924 GIGYF1O75420 1035 aaPredicted RBP14.01□□□□□ -0.17
ABCD4-201ENST00000356924 FLIIQ13045 1269 aa14.01□□□□□ -0.17
ABCD4-201ENST00000356924 HDAC1Q13547 482 aaPredicted RBP14.01□□□□□ -0.17
ABCD4-201ENST00000356924 NKX1-1Q15270 411 aaPredicted RBP14.01□□□□□ -0.17
ABCD4-201ENST00000356924 TOGARAM1Q9Y4F4 1720 aa14.01□□□□□ -0.17
ABCD4-201ENST00000356924 SLC39A6Q13433 755 aa14.01□□□□□ -0.17
ABCD4-201ENST00000356924 GLI3P10071 1580 aa14□□□□□ -0.17
ABCD4-201ENST00000356924 ZNF790Q6PG37 636 aa14□□□□□ -0.17
ABCD4-201ENST00000356924 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
ABCD4-201ENST00000356924 EIF2S2P20042 333 aaKnown RBP14□□□□□ -0.17
ABCD4-201ENST00000356924 CHMP4BQ9H444 224 aaKnown RBP14□□□□□ -0.17
ABCD4-201ENST00000356924 PAPPAQ13219 1627 aa14□□□□□ -0.17
ABCD4-201ENST00000356924 F6X3S4 739 aa13.99□□□□□ -0.17
ABCD4-201ENST00000356924 ADAMTS2O95450 1211 aa13.99□□□□□ -0.17
ABCD4-201ENST00000356924 C1orf115Q9H7X2 142 aa13.99□□□□□ -0.17
ABCD4-201ENST00000356924 PHAXQ9H814 394 aaKnown RBP13.99□□□□□ -0.17
ABCD4-201ENST00000356924 CHPF2Q9P2E5 772 aa13.99□□□□□ -0.17
ABCD4-201ENST00000356924 NWD2Q9ULI1 1742 aa13.98□□□□□ -0.17
ABCD4-201ENST00000356924 CABP4P57796 275 aa13.98□□□□□ -0.17
ABCD4-201ENST00000356924 UBR2Q8IWV8 1755 aa13.98□□□□□ -0.17
ABCD4-201ENST00000356924 PXDNLA1KZ92 1463 aa13.97□□□□□ -0.17
ABCD4-201ENST00000356924 AEBP2Q6ZN18 517 aaPredicted RBP13.97□□□□□ -0.17
ABCD4-201ENST00000356924 FKBP5Q13451 457 aaPredicted RBP13.97□□□□□ -0.17
ABCD4-201ENST00000356924 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
ABCD4-201ENST00000356924 BRPF3Q9ULD4 1205 aa13.97□□□□□ -0.17
ABCD4-201ENST00000356924 NUTM2BA6NNL0 878 aaPredicted RBP13.96□□□□□ -0.17
ABCD4-201ENST00000356924 NUTM2EB1AL46 878 aaPredicted RBP13.96□□□□□ -0.17
ABCD4-201ENST00000356924 ERVV-2B6SEH9 535 aa13.96□□□□□ -0.17
ABCD4-201ENST00000356924 NUTM2AQ8IVF1 878 aaPredicted RBP13.96□□□□□ -0.17
ABCD4-201ENST00000356924 CHMP4AQ9BY43 222 aa13.96□□□□□ -0.17
ABCD4-201ENST00000356924 SLIT2O94813 1529 aa13.96□□□□□ -0.17
ABCD4-201ENST00000356924 CCT4P50991 539 aaKnown RBP13.96□□□□□ -0.17
ABCD4-201ENST00000356924 SIRT2Q8IXJ6 389 aa13.96□□□□□ -0.17
ABCD4-201ENST00000356924 ZNF496Q96IT1 587 aaPredicted RBP13.96□□□□□ -0.17
ABCD4-201ENST00000356924 PDZRN3Q9UPQ7 1066 aa13.96□□□□□ -0.17
ABCD4-201ENST00000356924 LAMB4A4D0S4 1761 aa13.96□□□□□ -0.18
ABCD4-201ENST00000356924 ANXA1P04083 346 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms