RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 HOXB7P09629 217 aa29.03■■■□□ 2.24
SCAMP3-202ENST00000355379 CCDC30Q5VVM6 783 aa29.03■■■□□ 2.24
SCAMP3-202ENST00000355379 CHMP4AQ9BY43 222 aa29.03■■■□□ 2.24
SCAMP3-202ENST00000355379 EIF4A1P60842 406 aaKnown RBP29.02■■■□□ 2.24
SCAMP3-202ENST00000355379 PCDHB15Q9Y5E8 787 aa29.01■■■□□ 2.23
SCAMP3-202ENST00000355379 HSP90AB1P08238 724 aaKnown RBP29■■■□□ 2.23
SCAMP3-202ENST00000355379 EVA1CP58658 441 aa29■■■□□ 2.23
SCAMP3-202ENST00000355379 ZBTB40Q9NUA8 1239 aa29■■■□□ 2.23
SCAMP3-202ENST00000355379 KDM6AO15550 1401 aaPredicted RBP29■■■□□ 2.23
SCAMP3-202ENST00000355379 RGS12O14924 1447 aa28.99■■■□□ 2.23
SCAMP3-202ENST00000355379 IGHDP01880 384 aa28.99■■■□□ 2.23
SCAMP3-202ENST00000355379 SLC4A2P04920 1241 aa28.99■■■□□ 2.23
SCAMP3-202ENST00000355379 MRC1P22897 1456 aa28.99■■■□□ 2.23
SCAMP3-202ENST00000355379 STK31Q9BXU1 1019 aa28.99■■■□□ 2.23
SCAMP3-202ENST00000355379 INTS3Q68E01 1043 aaKnown RBP28.97■■■□□ 2.23
SCAMP3-202ENST00000355379 DCAF5Q96JK2 942 aa28.97■■■□□ 2.23
SCAMP3-202ENST00000355379 RWDD1Q9H446 243 aaPredicted RBP28.97■■■□□ 2.23
SCAMP3-202ENST00000355379 ZBTB7BO15156 539 aaPredicted RBP28.96■■■□□ 2.23
SCAMP3-202ENST00000355379 CYP27B1O15528 508 aa28.96■■■□□ 2.23
SCAMP3-202ENST00000355379 LARP1Q6PKG0 1096 aaKnown RBP28.95■■■□□ 2.23
SCAMP3-202ENST00000355379 SHANK3Q9BYB0 1731 aa28.95■■■□□ 2.23
SCAMP3-202ENST00000355379 HEG1Q9ULI3 1381 aa28.95■■■□□ 2.22
SCAMP3-202ENST00000355379 IL2RBP14784 551 aa28.94■■■□□ 2.22
SCAMP3-202ENST00000355379 SLC52A2Q9HAB3 445 aa28.94■■■□□ 2.22
SCAMP3-202ENST00000355379 STRN4Q9NRL3 753 aa28.94■■■□□ 2.22
SCAMP3-202ENST00000355379 ZCRB1Q8TBF4 217 aaKnown RBP28.94■■■□□ 2.22
SCAMP3-202ENST00000355379 PCDH11XQ9BZA7 1347 aa28.93■■■□□ 2.22
SCAMP3-202ENST00000355379 PCDH11YQ9BZA8 1340 aa28.93■■■□□ 2.22
SCAMP3-202ENST00000355379 BTG4Q9NY30 223 aa28.93■■■□□ 2.22
SCAMP3-202ENST00000355379 N4BP2Q86UW6 1770 aaPredicted RBP28.92■■■□□ 2.22
SCAMP3-202ENST00000355379 KCNQ3O43525 872 aa28.92■■■□□ 2.22
SCAMP3-202ENST00000355379 HDAC1Q13547 482 aaPredicted RBP28.92■■■□□ 2.22
SCAMP3-202ENST00000355379 HDGFL1Q5TGJ6 251 aa28.91■■■□□ 2.22
SCAMP3-202ENST00000355379 PLCH1Q4KWH8 1693 aa28.91■■■□□ 2.22
SCAMP3-202ENST00000355379 G2E3Q7L622 706 aa28.89■■■□□ 2.22
SCAMP3-202ENST00000355379 NKX1-1Q15270 411 aaPredicted RBP28.88■■■□□ 2.21
SCAMP3-202ENST00000355379 FLIIQ13045 1269 aa28.87■■■□□ 2.21
SCAMP3-202ENST00000355379 WNK3Q9BYP7 1800 aa28.87■■■□□ 2.21
SCAMP3-202ENST00000355379 NRAPQ86VF7 1730 aa28.87■■■□□ 2.21
SCAMP3-202ENST00000355379 GIGYF1O75420 1035 aaPredicted RBP28.86■■■□□ 2.21
SCAMP3-202ENST00000355379 PIP4K2BP78356 416 aa28.86■■■□□ 2.21
SCAMP3-202ENST00000355379 NFATC2IPQ8NCF5 419 aa28.85■■■□□ 2.21
SCAMP3-202ENST00000355379 UBAP1LF5GYI3 381 aa28.84■■■□□ 2.21
SCAMP3-202ENST00000355379 CCT4P50991 539 aaKnown RBP28.84■■■□□ 2.21
SCAMP3-202ENST00000355379 ZNF790Q6PG37 636 aa28.84■■■□□ 2.21
SCAMP3-202ENST00000355379 PXDNLA1KZ92 1463 aa28.84■■■□□ 2.21
SCAMP3-202ENST00000355379 NECTIN2Q92692 538 aa28.84■■■□□ 2.21
SCAMP3-202ENST00000355379 DISP2A7MBM2 1401 aa28.83■■■□□ 2.21
SCAMP3-202ENST00000355379 NWD2Q9ULI1 1742 aa28.83■■■□□ 2.21
SCAMP3-202ENST00000355379 ERVV-2B6SEH9 535 aa28.82■■■□□ 2.2
SCAMP3-202ENST00000355379 CABP4P57796 275 aa28.82■■■□□ 2.2
SCAMP3-202ENST00000355379 EIF2S2P20042 333 aaKnown RBP28.81■■■□□ 2.2
SCAMP3-202ENST00000355379 RBM19Q9Y4C8 960 aaKnown RBP28.81■■■□□ 2.2
SCAMP3-202ENST00000355379 C5P01031 1676 aa28.81■■■□□ 2.2
SCAMP3-202ENST00000355379 FKBP5Q13451 457 aaPredicted RBP28.8■■■□□ 2.2
SCAMP3-202ENST00000355379 DBF4Q9UBU7 674 aaPredicted RBP28.79■■■□□ 2.2
SCAMP3-202ENST00000355379 PAPPAQ13219 1627 aa28.79■■■□□ 2.2
SCAMP3-202ENST00000355379 SMC5Q8IY18 1101 aa28.78■■■□□ 2.2
SCAMP3-202ENST00000355379 CHPF2Q9P2E5 772 aa28.78■■■□□ 2.2
SCAMP3-202ENST00000355379 UBR2Q8IWV8 1755 aa28.77■■■□□ 2.2
SCAMP3-202ENST00000355379 AEBP2Q6ZN18 517 aaPredicted RBP28.77■■■□□ 2.2
SCAMP3-202ENST00000355379 SKAP1Q86WV1 359 aa28.77■■■□□ 2.2
SCAMP3-202ENST00000355379 F6X3S4 739 aa28.76■■■□□ 2.19
SCAMP3-202ENST00000355379 SLC39A6Q13433 755 aa28.76■■■□□ 2.19
SCAMP3-202ENST00000355379 LAMB4A4D0S4 1761 aa28.75■■■□□ 2.19
SCAMP3-202ENST00000355379 TTC5Q8N0Z6 440 aa28.75■■■□□ 2.19
SCAMP3-202ENST00000355379 PHAXQ9H814 394 aaKnown RBP28.75■■■□□ 2.19
SCAMP3-202ENST00000355379 PDZRN3Q9UPQ7 1066 aa28.75■■■□□ 2.19
SCAMP3-202ENST00000355379 TOGARAM1Q9Y4F4 1720 aa28.75■■■□□ 2.19
SCAMP3-202ENST00000355379 ADAMTS2O95450 1211 aa28.74■■■□□ 2.19
SCAMP3-202ENST00000355379 SLC4A10Q6U841 1118 aa28.74■■■□□ 2.19
SCAMP3-202ENST00000355379 DDX54Q8TDD1 881 aaKnown RBP28.74■■■□□ 2.19
SCAMP3-202ENST00000355379 FMNL2Q96PY5 1086 aa28.74■■■□□ 2.19
SCAMP3-202ENST00000355379 USP35Q9P2H5 1018 aa28.74■■■□□ 2.19
SCAMP3-202ENST00000355379 GLI3P10071 1580 aa28.73■■■□□ 2.19
SCAMP3-202ENST00000355379 SNRPA1P09661 255 aaKnown RBP28.72■■■□□ 2.19
SCAMP3-202ENST00000355379 ZNF496Q96IT1 587 aaPredicted RBP28.72■■■□□ 2.19
SCAMP3-202ENST00000355379 CDCA7Q9BWT1 371 aaPredicted RBP28.72■■■□□ 2.19
SCAMP3-202ENST00000355379 C1orf115Q9H7X2 142 aa28.72■■■□□ 2.19
SCAMP3-202ENST00000355379 HYPKQ9NX55 129 aa28.72■■■□□ 2.19
SCAMP3-202ENST00000355379 THRAP3Q9Y2W1 955 aaKnown RBP28.72■■■□□ 2.19
SCAMP3-202ENST00000355379 JCADQ9P266 1359 aa28.72■■■□□ 2.19
SCAMP3-202ENST00000355379 SLIT2O94813 1529 aa28.72■■■□□ 2.19
SCAMP3-202ENST00000355379 LRP6O75581 1613 aa28.71■■■□□ 2.19
SCAMP3-202ENST00000355379 GCC1Q96CN9 775 aa28.71■■■□□ 2.19
SCAMP3-202ENST00000355379 DDX21Q9NR30 783 aaKnown RBP eCLIP28.71■■■□□ 2.19
SCAMP3-202ENST00000355379 ATP10DQ9P241 1426 aa28.7■■■□□ 2.19
SCAMP3-202ENST00000355379 RGS3P49796 1198 aa28.7■■■□□ 2.19
SCAMP3-202ENST00000355379 RPAP2Q8IXW5 612 aaPredicted RBP28.7■■■□□ 2.19
SCAMP3-202ENST00000355379 PRAMEF22A3QJZ6 481 aa28.69■■■□□ 2.18
SCAMP3-202ENST00000355379 SIRT2Q8IXJ6 389 aa28.69■■■□□ 2.18
SCAMP3-202ENST00000355379 CERKQ8TCT0 537 aa28.69■■■□□ 2.18
SCAMP3-202ENST00000355379 MEIS3Q99687 375 aa28.69■■■□□ 2.18
SCAMP3-202ENST00000355379 NUTM2BA6NNL0 878 aaPredicted RBP28.69■■■□□ 2.18
SCAMP3-202ENST00000355379 NUTM2EB1AL46 878 aaPredicted RBP28.69■■■□□ 2.18
SCAMP3-202ENST00000355379 PDE4AP27815 886 aa28.69■■■□□ 2.18
SCAMP3-202ENST00000355379 NUTM2AQ8IVF1 878 aaPredicted RBP28.69■■■□□ 2.18
SCAMP3-202ENST00000355379 ANKRD44Q8N8A2 993 aa28.69■■■□□ 2.18
SCAMP3-202ENST00000355379 SPATA31A1Q5TZJ5 1347 aa28.68■■■□□ 2.18
SCAMP3-202ENST00000355379 ITGB4P16144 1822 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms