RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 PDE4AP27815 886 aa11.66□□□□□ -0.54
GABPA-201ENST00000354828 ARHGEF5Q12774 1597 aa11.65□□□□□ -0.54
GABPA-201ENST00000354828 TTC37Q6PGP7 1564 aa11.65□□□□□ -0.54
GABPA-201ENST00000354828 SLC5A1P13866 664 aa11.65□□□□□ -0.54
GABPA-201ENST00000354828 TMEM132AQ24JP5 1023 aa11.65□□□□□ -0.54
GABPA-201ENST00000354828 CWC25Q9NXE8 425 aaPredicted RBP11.65□□□□□ -0.54
GABPA-201ENST00000354828 AIDAQ96BJ3 306 aa11.65□□□□□ -0.54
GABPA-201ENST00000354828 ATP2B1P20020 1258 aa11.65□□□□□ -0.54
GABPA-201ENST00000354828 SIRT1Q96EB6 747 aa11.65□□□□□ -0.54
GABPA-201ENST00000354828 POLR3DP05423 398 aaPredicted RBP11.65□□□□□ -0.55
GABPA-201ENST00000354828 TPM2P07951 284 aa11.65□□□□□ -0.55
GABPA-201ENST00000354828 LTKP29376 864 aa11.65□□□□□ -0.55
GABPA-201ENST00000354828 BAG6P46379 1132 aa11.65□□□□□ -0.55
GABPA-201ENST00000354828 TMEM2Q9UHN6 1383 aa11.65□□□□□ -0.55
GABPA-201ENST00000354828 YTHDC2Q9H6S0 1430 aaKnown RBP11.64□□□□□ -0.55
GABPA-201ENST00000354828 MAP3K2Q9Y2U5 619 aa11.64□□□□□ -0.55
GABPA-201ENST00000354828 ABCC11Q96J66 1382 aa11.64□□□□□ -0.55
GABPA-201ENST00000354828 ANXA1P04083 346 aa11.64□□□□□ -0.55
GABPA-201ENST00000354828 GRM1Q13255 1194 aa11.64□□□□□ -0.55
GABPA-201ENST00000354828 AKAP4Q5JQC9 854 aa11.64□□□□□ -0.55
GABPA-201ENST00000354828 C16orf71Q8IYS4 520 aaPredicted RBP11.64□□□□□ -0.55
GABPA-201ENST00000354828 RBM19Q9Y4C8 960 aaKnown RBP11.64□□□□□ -0.55
GABPA-201ENST00000354828 CLASP1Q7Z460 1538 aa11.64□□□□□ -0.55
GABPA-201ENST00000354828 NPATQ14207 1427 aa11.64□□□□□ -0.55
GABPA-201ENST00000354828 NIP7Q9Y221 180 aaKnown RBP eCLIP11.64□□□□□ -0.55
GABPA-201ENST00000354828 MAST1Q9Y2H9 1570 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 MVPQ14764 893 aaKnown RBP11.63□□□□□ -0.55
GABPA-201ENST00000354828 LDHAL6AQ6ZMR3 332 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 NFATC2IPQ8NCF5 419 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 NUP133Q8WUM0 1156 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 NLRP3Q96P20 1036 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 CCNL1Q9UK58 526 aaPredicted RBP11.63□□□□□ -0.55
GABPA-201ENST00000354828 EIF4A2Q14240 407 aaKnown RBP11.63□□□□□ -0.55
GABPA-201ENST00000354828 WDR78Q5VTH9 848 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 EXOC6BQ9Y2D4 811 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 ABCC1P33527 1531 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 FLT4P35916 1363 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 GNPATO15228 680 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 APBA3O96018 575 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 FLIIQ13045 1269 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 ANKRD13DQ6ZTN6 518 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 UBE3BQ7Z3V4 1068 aa11.63□□□□□ -0.55
GABPA-201ENST00000354828 RPAP2Q8IXW5 612 aaPredicted RBP11.63□□□□□ -0.55
GABPA-201ENST00000354828 AEBP1Q8IUX7 1158 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 SLF2Q8IX21 1173 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 BICD2Q8TD16 824 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 SAMD9LQ8IVG5 1584 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 UBAC1Q9BSL1 405 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 RALGAPBQ86X10 1494 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 CCDC69A6NI79 296 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 CCDC152Q4G0S7 254 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 TRAPPC3LQ5T215 181 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 IP6K1Q92551 441 aa11.62□□□□□ -0.55
GABPA-201ENST00000354828 CCDC184Q52MB2 194 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 TMEM57Q8N5G2 664 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 JARID2Q92833 1246 aaPredicted RBP11.61□□□□□ -0.55
GABPA-201ENST00000354828 TSR1Q2NL82 804 aaKnown RBP11.61□□□□□ -0.55
GABPA-201ENST00000354828 SOGA3Q5TF21 947 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 TPTE2Q6XPS3 522 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 DZIP3Q86Y13 1208 aaKnown RBP11.61□□□□□ -0.55
GABPA-201ENST00000354828 NUTM1Q86Y26 1132 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 ARHGEF10O15013 1369 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 HOOK1Q9UJC3 728 aaKnown RBP11.61□□□□□ -0.55
GABPA-201ENST00000354828 PI4KAP2A4QPH2 592 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 MYO1BO43795 1136 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 PIP4K2AP48426 406 aaPredicted RBP11.61□□□□□ -0.55
GABPA-201ENST00000354828 SLFN5Q08AF3 891 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 PI4KAP1Q8N8J0 262 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 KRI1Q8N9T8 703 aaKnown RBP11.61□□□□□ -0.55
GABPA-201ENST00000354828 SSH1Q8WYL5 1049 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 DCAF5Q96JK2 942 aa11.61□□□□□ -0.55
GABPA-201ENST00000354828 PCMTD1Q96MG8 357 aaPredicted RBP11.61□□□□□ -0.55
GABPA-201ENST00000354828 WWC2Q6AWC2 1192 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 NOC3LQ8WTT2 800 aaKnown RBP11.6□□□□□ -0.55
GABPA-201ENST00000354828 MKNK2Q9HBH9 465 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 BECN2A8MW95 431 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 HOXC9P31274 260 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 MAP3K12Q12852 859 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 KIF1BPQ96EK5 621 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 CTNNA3Q9UI47 895 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 JDP2Q8WYK2 163 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 COPS6Q7L5N1 327 aa11.6□□□□□ -0.55
GABPA-201ENST00000354828 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
GABPA-201ENST00000354828 MSNP26038 577 aaKnown RBP11.59□□□□□ -0.55
GABPA-201ENST00000354828 ANKRD18AQ8IVF6 992 aa11.59□□□□□ -0.55
GABPA-201ENST00000354828 PUS7Q96PZ0 661 aaKnown RBP11.59□□□□□ -0.55
GABPA-201ENST00000354828 QTRT2Q9H974 415 aaKnown RBP11.59□□□□□ -0.55
GABPA-201ENST00000354828 POLKQ9UBT6 870 aa11.59□□□□□ -0.55
GABPA-201ENST00000354828 TRIM22Q8IYM9 498 aa11.59□□□□□ -0.55
GABPA-201ENST00000354828 C22orf23Q9BZE7 217 aa11.59□□□□□ -0.55
GABPA-201ENST00000354828 NYXQ9GZU5 481 aa11.59□□□□□ -0.55
GABPA-201ENST00000354828 LRRFIP2Q9Y608 721 aaKnown RBP11.59□□□□□ -0.55
GABPA-201ENST00000354828 EYA1Q99502 592 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms