RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 U2AF1L5P0DN76 240 aaPredicted RBP27.07■■□□□ 1.92
HCFC1R1-202ENST00000354679 ATP6V1AP38606 617 aa27.07■■□□□ 1.92
HCFC1R1-202ENST00000354679 PTGER2P43116 358 aa27.07■■□□□ 1.92
HCFC1R1-202ENST00000354679 U2AF1Q01081 240 aaKnown RBP eCLIP27.07■■□□□ 1.92
HCFC1R1-202ENST00000354679 RSPH6AQ9H0K4 717 aa27.07■■□□□ 1.92
HCFC1R1-202ENST00000354679 LGR6Q9HBX8 967 aa27.07■■□□□ 1.92
HCFC1R1-202ENST00000354679 PRKAR2BP31323 418 aa27.06■■□□□ 1.92
HCFC1R1-202ENST00000354679 GAS2L2Q8NHY3 880 aa27.06■■□□□ 1.92
HCFC1R1-202ENST00000354679 SLC16A10Q8TF71 515 aa27.06■■□□□ 1.92
HCFC1R1-202ENST00000354679 ITPK1Q13572 414 aa27.05■■□□□ 1.92
HCFC1R1-202ENST00000354679 RALBP1Q15311 655 aa27.05■■□□□ 1.92
HCFC1R1-202ENST00000354679 LINC00116Q8NCU8 138 aa27.05■■□□□ 1.92
HCFC1R1-202ENST00000354679 AK7Q96M32 723 aa27.05■■□□□ 1.92
HCFC1R1-202ENST00000354679 RBM42Q9BTD8 480 aaKnown RBP27.05■■□□□ 1.92
HCFC1R1-202ENST00000354679 SLC52A2Q9HAB3 445 aa27.05■■□□□ 1.92
HCFC1R1-202ENST00000354679 MRC1P22897 1456 aa27.04■■□□□ 1.92
HCFC1R1-202ENST00000354679 COL23A1Q86Y22 540 aaPredicted RBP27.03■■□□□ 1.92
HCFC1R1-202ENST00000354679 SGIP1Q9BQI5 828 aa27.03■■□□□ 1.92
HCFC1R1-202ENST00000354679 ADAMTS7Q9UKP4 1686 aa27.03■■□□□ 1.92
HCFC1R1-202ENST00000354679 MAP3K5Q99683 1374 aa27.02■■□□□ 1.92
HCFC1R1-202ENST00000354679 MSH5O43196 834 aa27.02■■□□□ 1.92
HCFC1R1-202ENST00000354679 PHACTR3Q96KR7 559 aa27.02■■□□□ 1.92
HCFC1R1-202ENST00000354679 SLC4A9Q96Q91 983 aa27.02■■□□□ 1.92
HCFC1R1-202ENST00000354679 FCHSD2O94868 740 aa27.01■■□□□ 1.91
HCFC1R1-202ENST00000354679 FLAD1Q8NFF5 587 aa27.01■■□□□ 1.91
HCFC1R1-202ENST00000354679 VIRMAQ69YN4 1812 aaKnown RBP27.01■■□□□ 1.91
HCFC1R1-202ENST00000354679 ZNF831Q5JPB2 1677 aa27.01■■□□□ 1.91
HCFC1R1-202ENST00000354679 GNAT3A8MTJ3 354 aa27■■□□□ 1.91
HCFC1R1-202ENST00000354679 PTCD1O75127 700 aaKnown RBP26.98■■□□□ 1.91
HCFC1R1-202ENST00000354679 UBR3Q6ZT12 1888 aa26.98■■□□□ 1.91
HCFC1R1-202ENST00000354679 AMIGO3Q86WK7 504 aa26.97■■□□□ 1.91
HCFC1R1-202ENST00000354679 GNPATO15228 680 aa26.96■■□□□ 1.91
HCFC1R1-202ENST00000354679 PHF14O94880 888 aa26.96■■□□□ 1.91
HCFC1R1-202ENST00000354679 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.95■■□□□ 1.9
HCFC1R1-202ENST00000354679 SSFA2P28290 1259 aa26.95■■□□□ 1.9
HCFC1R1-202ENST00000354679 POLD1P28340 1107 aa26.95■■□□□ 1.9
HCFC1R1-202ENST00000354679 ARXQ96QS3 562 aa26.95■■□□□ 1.9
HCFC1R1-202ENST00000354679 COL24A1Q17RW2 1714 aa26.95■■□□□ 1.9
HCFC1R1-202ENST00000354679 MYBBP1AQ9BQG0 1328 aaKnown RBP26.94■■□□□ 1.9
HCFC1R1-202ENST00000354679 SMIM5Q71RC9 77 aa26.94■■□□□ 1.9
HCFC1R1-202ENST00000354679 IL17REQ8NFR9 667 aa26.94■■□□□ 1.9
HCFC1R1-202ENST00000354679 COL5A3P25940 1745 aaPredicted RBP26.93■■□□□ 1.9
HCFC1R1-202ENST00000354679 SLC39A6Q13433 755 aa26.93■■□□□ 1.9
HCFC1R1-202ENST00000354679 TEFQ10587 303 aa26.92■■□□□ 1.9
HCFC1R1-202ENST00000354679 RC3H1Q5TC82 1133 aaKnown RBP26.92■■□□□ 1.9
HCFC1R1-202ENST00000354679 CNTNAP4Q9C0A0 1308 aa26.91■■□□□ 1.9
HCFC1R1-202ENST00000354679 MSL1Q68DK7 614 aa26.91■■□□□ 1.9
HCFC1R1-202ENST00000354679 FHDC1Q9C0D6 1143 aaPredicted RBP26.91■■□□□ 1.9
HCFC1R1-202ENST00000354679 CICQ96RK0 1608 aaPredicted RBP26.9■■□□□ 1.9
HCFC1R1-202ENST00000354679 CEMIPQ8WUJ3 1361 aa26.9■■□□□ 1.9
HCFC1R1-202ENST00000354679 TJP1Q07157 1748 aa26.9■■□□□ 1.9
HCFC1R1-202ENST00000354679 NEFMP07197 916 aa26.89■■□□□ 1.9
HCFC1R1-202ENST00000354679 RTCBQ9Y3I0 505 aaKnown RBP26.89■■□□□ 1.9
HCFC1R1-202ENST00000354679 KCPQ6ZWJ8 1503 aa26.89■■□□□ 1.89
HCFC1R1-202ENST00000354679 TTC5Q8N0Z6 440 aa26.87■■□□□ 1.89
HCFC1R1-202ENST00000354679 RTF1Q92541 710 aaKnown RBP26.87■■□□□ 1.89
HCFC1R1-202ENST00000354679 SYT17Q9BSW7 474 aa26.87■■□□□ 1.89
HCFC1R1-202ENST00000354679 SIPA1L3O60292 1781 aaPredicted RBP26.86■■□□□ 1.89
HCFC1R1-202ENST00000354679 CRKLP46109 303 aaKnown RBP26.86■■□□□ 1.89
HCFC1R1-202ENST00000354679 DNAJC10Q8IXB1 793 aa26.86■■□□□ 1.89
HCFC1R1-202ENST00000354679 PLEKHF1Q96S99 279 aa26.86■■□□□ 1.89
HCFC1R1-202ENST00000354679 PRKRIP1Q9H875 184 aaPredicted RBP26.86■■□□□ 1.89
HCFC1R1-202ENST00000354679 MYH14Q7Z406 1995 aaKnown RBP26.86■■□□□ 1.89
HCFC1R1-202ENST00000354679 UBR2Q8IWV8 1755 aa26.85■■□□□ 1.89
HCFC1R1-202ENST00000354679 RPS6KA4O75676 772 aa26.85■■□□□ 1.89
HCFC1R1-202ENST00000354679 TRAPPC3LQ5T215 181 aa26.85■■□□□ 1.89
HCFC1R1-202ENST00000354679 PNNQ9H307 717 aaKnown RBP26.85■■□□□ 1.89
HCFC1R1-202ENST00000354679 HTATSF1O43719 755 aaKnown RBP26.84■■□□□ 1.89
HCFC1R1-202ENST00000354679 ADRA2BP18089 450 aa26.84■■□□□ 1.89
HCFC1R1-202ENST00000354679 MCM10Q7L590 875 aa26.84■■□□□ 1.89
HCFC1R1-202ENST00000354679 ZNF316A6NFI3 1004 aaPredicted RBP26.83■■□□□ 1.89
HCFC1R1-202ENST00000354679 ZNF790Q6PG37 636 aa26.83■■□□□ 1.89
HCFC1R1-202ENST00000354679 VSIG10Q8N0Z9 540 aa26.83■■□□□ 1.89
HCFC1R1-202ENST00000354679 KLHL34Q8N239 644 aa26.83■■□□□ 1.89
HCFC1R1-202ENST00000354679 MAPK8IP3Q9UPT6 1336 aa26.82■■□□□ 1.88
HCFC1R1-202ENST00000354679 DCTN1Q14203 1278 aa26.81■■□□□ 1.88
HCFC1R1-202ENST00000354679 ARHGEF1Q92888 912 aaKnown RBP26.81■■□□□ 1.88
HCFC1R1-202ENST00000354679 BTBD11A6QL63 1104 aa26.8■■□□□ 1.88
HCFC1R1-202ENST00000354679 INTS5Q6P9B9 1019 aaKnown RBP26.8■■□□□ 1.88
HCFC1R1-202ENST00000354679 DCAF8L1A6NGE4 600 aa26.79■■□□□ 1.88
HCFC1R1-202ENST00000354679 CYP19A1P11511 503 aaPredicted RBP26.79■■□□□ 1.88
HCFC1R1-202ENST00000354679 NFE2L2Q16236 605 aa26.79■■□□□ 1.88
HCFC1R1-202ENST00000354679 ZNF496Q96IT1 587 aaPredicted RBP26.79■■□□□ 1.88
HCFC1R1-202ENST00000354679 CCDC87Q9NVE4 849 aa26.79■■□□□ 1.88
HCFC1R1-202ENST00000354679 RFC4P35249 363 aa26.78■■□□□ 1.88
HCFC1R1-202ENST00000354679 HEG1Q9ULI3 1381 aa26.77■■□□□ 1.88
HCFC1R1-202ENST00000354679 DLG5Q8TDM6 1919 aa26.77■■□□□ 1.88
HCFC1R1-202ENST00000354679 KCNQ3O43525 872 aa26.76■■□□□ 1.87
HCFC1R1-202ENST00000354679 FMNL2Q96PY5 1086 aa26.76■■□□□ 1.87
HCFC1R1-202ENST00000354679 C4AP0C0L4 1744 aa26.75■■□□□ 1.87
HCFC1R1-202ENST00000354679 WDR43Q15061 677 aaKnown RBP eCLIP26.74■■□□□ 1.87
HCFC1R1-202ENST00000354679 ZBTB1Q9Y2K1 713 aa26.74■■□□□ 1.87
HCFC1R1-202ENST00000354679 SOS1Q07889 1333 aaPredicted RBP26.73■■□□□ 1.87
HCFC1R1-202ENST00000354679 STARD3NLO95772 234 aa26.73■■□□□ 1.87
HCFC1R1-202ENST00000354679 GYS1P13807 737 aa26.73■■□□□ 1.87
HCFC1R1-202ENST00000354679 NLGN1Q8N2Q7 840 aa26.73■■□□□ 1.87
HCFC1R1-202ENST00000354679 TEX13AQ9BXU3 409 aaPredicted RBP26.73■■□□□ 1.87
HCFC1R1-202ENST00000354679 NLGN2Q8NFZ4 835 aa26.72■■□□□ 1.87
HCFC1R1-202ENST00000354679 MMP10P09238 476 aa26.71■■□□□ 1.87
HCFC1R1-202ENST00000354679 TAF7Q15545 349 aaPredicted RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms