RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 RCAN3Q9UKA8 241 aa26.04■■□□□ 1.76
SIGMAR1-202ENST00000353468 THSD7AQ9UPZ6 1657 aa26.03■■□□□ 1.76
SIGMAR1-202ENST00000353468 MARCH10Q8NA82 808 aaPredicted RBP26.03■■□□□ 1.76
SIGMAR1-202ENST00000353468 CT47B1P0C2W7 299 aaPredicted RBP26.02■■□□□ 1.76
SIGMAR1-202ENST00000353468 MRC1P22897 1456 aa26.02■■□□□ 1.76
SIGMAR1-202ENST00000353468 SIPA1L3O60292 1781 aaPredicted RBP26.02■■□□□ 1.76
SIGMAR1-202ENST00000353468 C8orf58Q8NAV2 365 aa25.99■■□□□ 1.75
SIGMAR1-202ENST00000353468 SUPT16HQ9Y5B9 1047 aaKnown RBP25.99■■□□□ 1.75
SIGMAR1-202ENST00000353468 RBM6P78332 1123 aaKnown RBP25.99■■□□□ 1.75
SIGMAR1-202ENST00000353468 SEPT12Q8IYM1 358 aa25.99■■□□□ 1.75
SIGMAR1-202ENST00000353468 TSPYL6Q8N831 410 aa25.98■■□□□ 1.75
SIGMAR1-202ENST00000353468 ELL2O00472 640 aaPredicted RBP25.97■■□□□ 1.75
SIGMAR1-202ENST00000353468 KCNQ3O43525 872 aa25.97■■□□□ 1.75
SIGMAR1-202ENST00000353468 KDM3BQ7LBC6 1761 aa25.96■■□□□ 1.75
SIGMAR1-202ENST00000353468 TOGARAM1Q9Y4F4 1720 aa25.96■■□□□ 1.75
SIGMAR1-202ENST00000353468 VAMP4O75379 141 aa25.96■■□□□ 1.75
SIGMAR1-202ENST00000353468 KRT24Q2M2I5 525 aa25.96■■□□□ 1.75
SIGMAR1-202ENST00000353468 TWISTNBQ3B726 338 aaPredicted RBP25.96■■□□□ 1.75
SIGMAR1-202ENST00000353468 EIF4A1P60842 406 aaKnown RBP25.95■■□□□ 1.75
SIGMAR1-202ENST00000353468 TMOD3Q9NYL9 352 aa25.95■■□□□ 1.75
SIGMAR1-202ENST00000353468 RGS17Q9UGC6 210 aaPredicted RBP25.95■■□□□ 1.75
SIGMAR1-202ENST00000353468 ZNF790Q6PG37 636 aa25.95■■□□□ 1.74
SIGMAR1-202ENST00000353468 RARSP54136 660 aaKnown RBP25.94■■□□□ 1.74
SIGMAR1-202ENST00000353468 SLC39A6Q13433 755 aa25.94■■□□□ 1.74
SIGMAR1-202ENST00000353468 ILDR1Q86SU0 546 aaPredicted RBP25.94■■□□□ 1.74
SIGMAR1-202ENST00000353468 ZNF428Q96B54 188 aa25.93■■□□□ 1.74
SIGMAR1-202ENST00000353468 KAT6BQ8WYB5 2073 aa25.93■■□□□ 1.74
SIGMAR1-202ENST00000353468 RXRBP28702 533 aa25.91■■□□□ 1.74
SIGMAR1-202ENST00000353468 PRIM1P49642 420 aaKnown RBP25.91■■□□□ 1.74
SIGMAR1-202ENST00000353468 PIGBQ92521 554 aa25.91■■□□□ 1.74
SIGMAR1-202ENST00000353468 TTC5Q8N0Z6 440 aa25.9■■□□□ 1.74
SIGMAR1-202ENST00000353468 ITGB4P16144 1822 aa25.9■■□□□ 1.74
SIGMAR1-202ENST00000353468 SYTL4Q96C24 671 aaPredicted RBP25.9■■□□□ 1.74
SIGMAR1-202ENST00000353468 BCAR3O75815 825 aa25.89■■□□□ 1.73
SIGMAR1-202ENST00000353468 ACSBG1Q96GR2 724 aa25.89■■□□□ 1.73
SIGMAR1-202ENST00000353468 SOS1Q07889 1333 aaPredicted RBP25.89■■□□□ 1.73
SIGMAR1-202ENST00000353468 RNF123Q5XPI4 1314 aa25.89■■□□□ 1.73
SIGMAR1-202ENST00000353468 DOT1LQ8TEK3 1739 aa25.88■■□□□ 1.73
SIGMAR1-202ENST00000353468 ALDH1L2Q3SY69 923 aa25.88■■□□□ 1.73
SIGMAR1-202ENST00000353468 POTEAQ6S8J7 498 aa25.88■■□□□ 1.73
SIGMAR1-202ENST00000353468 BCL9O00512 1426 aa25.88■■□□□ 1.73
SIGMAR1-202ENST00000353468 HEG1Q9ULI3 1381 aa25.87■■□□□ 1.73
SIGMAR1-202ENST00000353468 SSH1Q8WYL5 1049 aa25.86■■□□□ 1.73
SIGMAR1-202ENST00000353468 BCL2L13Q9BXK5 485 aa25.86■■□□□ 1.73
SIGMAR1-202ENST00000353468 FAM182BQ5T319 152 aa25.86■■□□□ 1.73
SIGMAR1-202ENST00000353468 ZNF496Q96IT1 587 aaPredicted RBP25.86■■□□□ 1.73
SIGMAR1-202ENST00000353468 GIGYF1O75420 1035 aaPredicted RBP25.85■■□□□ 1.73
SIGMAR1-202ENST00000353468 HOXB7P09629 217 aa25.85■■□□□ 1.73
SIGMAR1-202ENST00000353468 RRP1P56182 461 aaKnown RBP25.85■■□□□ 1.73
SIGMAR1-202ENST00000353468 KRT27Q7Z3Y8 459 aa25.85■■□□□ 1.73
SIGMAR1-202ENST00000353468 FMNL2Q96PY5 1086 aa25.85■■□□□ 1.73
SIGMAR1-202ENST00000353468 SMC4Q9NTJ3 1288 aa25.85■■□□□ 1.73
SIGMAR1-202ENST00000353468 ATG3Q9NT62 314 aa25.84■■□□□ 1.73
SIGMAR1-202ENST00000353468 ASAP1Q9ULH1 1129 aa25.84■■□□□ 1.73
SIGMAR1-202ENST00000353468 PAPPAQ13219 1627 aa25.83■■□□□ 1.72
SIGMAR1-202ENST00000353468 KCNQ2O43526 872 aa25.82■■□□□ 1.72
SIGMAR1-202ENST00000353468 BRWD3Q6RI45 1802 aa25.82■■□□□ 1.72
SIGMAR1-202ENST00000353468 TCERG1O14776 1098 aaKnown RBP25.82■■□□□ 1.72
SIGMAR1-202ENST00000353468 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.82■■□□□ 1.72
SIGMAR1-202ENST00000353468 PLIN1O60240 522 aa25.8■■□□□ 1.72
SIGMAR1-202ENST00000353468 SNRPA1P09661 255 aaKnown RBP25.8■■□□□ 1.72
SIGMAR1-202ENST00000353468 BRPF1P55201 1214 aaPredicted RBP25.8■■□□□ 1.72
SIGMAR1-202ENST00000353468 CCDC30Q5VVM6 783 aa25.8■■□□□ 1.72
SIGMAR1-202ENST00000353468 MRPL50Q8N5N7 158 aaKnown RBP25.8■■□□□ 1.72
SIGMAR1-202ENST00000353468 CHMP4AQ9BY43 222 aa25.8■■□□□ 1.72
SIGMAR1-202ENST00000353468 UBR2Q8IWV8 1755 aa25.79■■□□□ 1.72
SIGMAR1-202ENST00000353468 PRAMEF22A3QJZ6 481 aa25.79■■□□□ 1.72
SIGMAR1-202ENST00000353468 PTCD1O75127 700 aaKnown RBP25.79■■□□□ 1.72
SIGMAR1-202ENST00000353468 EIF2S2P20042 333 aaKnown RBP25.79■■□□□ 1.72
SIGMAR1-202ENST00000353468 HDGFL1Q5TGJ6 251 aa25.79■■□□□ 1.72
SIGMAR1-202ENST00000353468 KCPQ6ZWJ8 1503 aa25.79■■□□□ 1.72
SIGMAR1-202ENST00000353468 NECTIN2Q92692 538 aa25.78■■□□□ 1.72
SIGMAR1-202ENST00000353468 FAM196AQ6ZSG2 479 aa25.78■■□□□ 1.72
SIGMAR1-202ENST00000353468 NEFLP07196 543 aa25.77■■□□□ 1.72
SIGMAR1-202ENST00000353468 FRAT1Q92837 279 aaPredicted RBP25.77■■□□□ 1.72
SIGMAR1-202ENST00000353468 RGS12O14924 1447 aa25.76■■□□□ 1.71
SIGMAR1-202ENST00000353468 STK31Q9BXU1 1019 aa25.76■■□□□ 1.71
SIGMAR1-202ENST00000353468 KIF16BQ96L93 1317 aa25.75■■□□□ 1.71
SIGMAR1-202ENST00000353468 SLC4A2P04920 1241 aa25.75■■□□□ 1.71
SIGMAR1-202ENST00000353468 RBM42Q9BTD8 480 aaKnown RBP25.75■■□□□ 1.71
SIGMAR1-202ENST00000353468 CANXP27824 592 aaKnown RBP25.74■■□□□ 1.71
SIGMAR1-202ENST00000353468 VSIG10Q8N0Z9 540 aa25.74■■□□□ 1.71
SIGMAR1-202ENST00000353468 NOB1Q9ULX3 412 aaKnown RBP25.74■■□□□ 1.71
SIGMAR1-202ENST00000353468 USP16Q9Y5T5 823 aa25.74■■□□□ 1.71
SIGMAR1-202ENST00000353468 NHSQ6T4R5 1651 aa25.74■■□□□ 1.71
SIGMAR1-202ENST00000353468 PTF1AQ7RTS3 328 aa25.73■■□□□ 1.71
SIGMAR1-202ENST00000353468 SMARCC1Q92922 1105 aaPredicted RBP25.73■■□□□ 1.71
SIGMAR1-202ENST00000353468 SBF2Q86WG5 1849 aa25.73■■□□□ 1.71
SIGMAR1-202ENST00000353468 IRX6P78412 446 aaPredicted RBP25.73■■□□□ 1.71
SIGMAR1-202ENST00000353468 C5P01031 1676 aa25.73■■□□□ 1.71
SIGMAR1-202ENST00000353468 IPO8O15397 1037 aaKnown RBP25.72■■□□□ 1.71
SIGMAR1-202ENST00000353468 ZKSCAN2Q63HK3 967 aa25.72■■□□□ 1.71
SIGMAR1-202ENST00000353468 TEX13AQ9BXU3 409 aaPredicted RBP25.7■■□□□ 1.71
SIGMAR1-202ENST00000353468 BCL11BQ9C0K0 894 aaPredicted RBP25.7■■□□□ 1.71
SIGMAR1-202ENST00000353468 CHPF2Q9P2E5 772 aa25.7■■□□□ 1.71
SIGMAR1-202ENST00000353468 CACNA1FO60840 1977 aa25.7■■□□□ 1.7
SIGMAR1-202ENST00000353468 PALLDQ8WX93 1383 aa25.69■■□□□ 1.7
SIGMAR1-202ENST00000353468 SLC4A9Q96Q91 983 aa25.69■■□□□ 1.7
SIGMAR1-202ENST00000353468 DBF4Q9UBU7 674 aaPredicted RBP25.69■■□□□ 1.7
SIGMAR1-202ENST00000353468 FKBP8Q14318 412 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms