RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TOMM22Q9NS69 142 aa15.78■□□□□ 0.12
IFT88-202ENST00000351808 MADDQ8WXG6 1647 aa15.78■□□□□ 0.12
IFT88-202ENST00000351808 ST5P78524 1137 aa15.77■□□□□ 0.12
IFT88-202ENST00000351808 PTPN14Q15678 1187 aa15.77■□□□□ 0.12
IFT88-202ENST00000351808 TEX35Q5T0J7 233 aa15.77■□□□□ 0.12
IFT88-202ENST00000351808 TXLNBQ8N3L3 684 aa15.77■□□□□ 0.12
IFT88-202ENST00000351808 PTPRCP08575 1304 aa15.77■□□□□ 0.12
IFT88-202ENST00000351808 SLU7O95391 586 aaKnown RBP15.77■□□□□ 0.12
IFT88-202ENST00000351808 PNMA6AP0CW24 399 aaPredicted RBP15.77■□□□□ 0.12
IFT88-202ENST00000351808 ERCC6LQ2NKX8 1250 aa15.77■□□□□ 0.12
IFT88-202ENST00000351808 CCDC191Q8NCU4 936 aa15.77■□□□□ 0.11
IFT88-202ENST00000351808 LRRFIP2Q9Y608 721 aaKnown RBP15.77■□□□□ 0.11
IFT88-202ENST00000351808 CLGNO14967 610 aa15.76■□□□□ 0.11
IFT88-202ENST00000351808 CLCN6P51797 869 aa15.76■□□□□ 0.11
IFT88-202ENST00000351808 H2AFXP16104 143 aaPredicted RBP15.76■□□□□ 0.11
IFT88-202ENST00000351808 CCDC144BQ3MJ40 725 aa15.76■□□□□ 0.11
IFT88-202ENST00000351808 CCDC144CPQ8IYA2 1237 aa15.76■□□□□ 0.11
IFT88-202ENST00000351808 SMARCE1Q969G3 411 aa15.76■□□□□ 0.11
IFT88-202ENST00000351808 PLEKHF1Q96S99 279 aa15.76■□□□□ 0.11
IFT88-202ENST00000351808 EXOC6BQ9Y2D4 811 aa15.76■□□□□ 0.11
IFT88-202ENST00000351808 DISP1Q96F81 1524 aa15.75■□□□□ 0.11
IFT88-202ENST00000351808 HTATSF1O43719 755 aaKnown RBP15.75■□□□□ 0.11
IFT88-202ENST00000351808 ZNF75DP51815 510 aa15.75■□□□□ 0.11
IFT88-202ENST00000351808 TRMT1Q9NXH9 659 aaKnown RBP15.75■□□□□ 0.11
IFT88-202ENST00000351808 UHRF1BP1LA0JNW5 1464 aa15.75■□□□□ 0.11
IFT88-202ENST00000351808 ATP10AO60312 1499 aa15.75■□□□□ 0.11
IFT88-202ENST00000351808 ZSCAN22P10073 491 aaPredicted RBP15.75■□□□□ 0.11
IFT88-202ENST00000351808 ZSCAN26Q16670 478 aa15.75■□□□□ 0.11
IFT88-202ENST00000351808 CTR9Q6PD62 1173 aa15.75■□□□□ 0.11
IFT88-202ENST00000351808 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
IFT88-202ENST00000351808 IL16Q14005 1332 aa15.75■□□□□ 0.11
IFT88-202ENST00000351808 ARID5BQ14865 1188 aa15.74■□□□□ 0.11
IFT88-202ENST00000351808 MYCBPQ99417 103 aaPredicted RBP15.74■□□□□ 0.11
IFT88-202ENST00000351808 MRVI1Q9Y6F6 885 aa15.74■□□□□ 0.11
IFT88-202ENST00000351808 PPRC1Q5VV67 1664 aaKnown RBP15.74■□□□□ 0.11
IFT88-202ENST00000351808 CAMK4Q16566 473 aa15.74■□□□□ 0.11
IFT88-202ENST00000351808 EP400NLQ6ZTU2 488 aa15.74■□□□□ 0.11
IFT88-202ENST00000351808 MRPL50Q8N5N7 158 aaKnown RBP15.74■□□□□ 0.11
IFT88-202ENST00000351808 NCAPGQ9BPX3 1015 aa15.74■□□□□ 0.11
IFT88-202ENST00000351808 CLIP2Q9UDT6 1046 aa15.74■□□□□ 0.11
IFT88-202ENST00000351808 YEATS2Q9ULM3 1422 aa15.74■□□□□ 0.11
IFT88-202ENST00000351808 ADGRB2O60241 1585 aa15.74■□□□□ 0.11
IFT88-202ENST00000351808 ELL2O00472 640 aaPredicted RBP15.73■□□□□ 0.11
IFT88-202ENST00000351808 NYAP1Q6ZVC0 841 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 ZCCHC17Q9NP64 241 aaKnown RBP15.73■□□□□ 0.11
IFT88-202ENST00000351808 KCNG1Q9UIX4 513 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 PLEKHD1A6NEE1 506 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 TYRO3Q06418 890 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 CFAP70Q5T0N1 1121 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 PLA2G4DQ86XP0 818 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 LRRN4CLQ8ND94 238 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 CBX8Q9HC52 389 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 ATG3Q9NT62 314 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 CCDC171Q6TFL3 1326 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 RTL1A6NKG5 1358 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 KIAA0556O60303 1618 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 GPATCH11Q8N954 259 aa15.73■□□□□ 0.11
IFT88-202ENST00000351808 GUCY2CP25092 1073 aa15.72■□□□□ 0.11
IFT88-202ENST00000351808 TPM4P67936 248 aa15.72■□□□□ 0.11
IFT88-202ENST00000351808 ERCC6Q03468 1493 aa15.72■□□□□ 0.11
IFT88-202ENST00000351808 TTC37Q6PGP7 1564 aa15.72■□□□□ 0.11
IFT88-202ENST00000351808 DTNBO60941 627 aa15.72■□□□□ 0.11
IFT88-202ENST00000351808 DNM1Q05193 864 aaKnown RBP15.72■□□□□ 0.11
IFT88-202ENST00000351808 SLC26A8Q96RN1 970 aa15.72■□□□□ 0.11
IFT88-202ENST00000351808 ADGRL1O94910 1474 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 BRPF1P55201 1214 aaPredicted RBP15.71■□□□□ 0.11
IFT88-202ENST00000351808 ANO6Q4KMQ2 910 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 RNF20Q5VTR2 975 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 CKAP2LQ8IYA6 745 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 PIK3R4Q99570 1358 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 STX6O43752 255 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 SYT1P21579 422 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 LMOD3Q0VAK6 560 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 LRRC8AQ8IWT6 810 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 TSPYL6Q8N831 410 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 ARHGAP45Q92619 1136 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 DRC1Q96MC2 740 aa15.71■□□□□ 0.11
IFT88-202ENST00000351808 F13A1P00488 732 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 MCCP23508 829 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 MAP3K11Q16584 847 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 SRLQ86TD4 932 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 VAMP4O75379 141 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 ARHGAP29Q52LW3 1261 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.7■□□□□ 0.1
IFT88-202ENST00000351808 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.7■□□□□ 0.1
IFT88-202ENST00000351808 LARP6Q9BRS8 491 aaKnown RBP15.7■□□□□ 0.1
IFT88-202ENST00000351808 ANO2Q9NQ90 1003 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 RRP15Q9Y3B9 282 aaKnown RBP15.7■□□□□ 0.1
IFT88-202ENST00000351808 JRKLQ9Y4A0 524 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 ABCC4O15439 1325 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 RAD50Q92878 1312 aa15.7■□□□□ 0.1
IFT88-202ENST00000351808 FBLN2P98095 1184 aa15.69■□□□□ 0.1
IFT88-202ENST00000351808 PTPRTO14522 1441 aa15.69■□□□□ 0.1
IFT88-202ENST00000351808 RGS12O14924 1447 aa15.69■□□□□ 0.1
IFT88-202ENST00000351808 SKILP12757 684 aa15.69■□□□□ 0.1
IFT88-202ENST00000351808 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
IFT88-202ENST00000351808 GPS2Q13227 327 aa15.69■□□□□ 0.1
IFT88-202ENST00000351808 CT47A1Q5JQC4 288 aaPredicted RBP15.69■□□□□ 0.1
IFT88-202ENST00000351808 SYTL4Q96C24 671 aaPredicted RBP15.69■□□□□ 0.1
IFT88-202ENST00000351808 BRMS1Q9HCU9 246 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms