RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 LMTK3Q96Q04 1460 aa26.55■■□□□ 1.84
PTPN18-202ENST00000347849 GZF1Q9H116 711 aaPredicted RBP26.55■■□□□ 1.84
PTPN18-202ENST00000347849 RRAGDQ9NQL2 400 aaPredicted RBP26.55■■□□□ 1.84
PTPN18-202ENST00000347849 KCNQ3O43525 872 aa26.55■■□□□ 1.84
PTPN18-202ENST00000347849 MCM4P33991 863 aa26.54■■□□□ 1.84
PTPN18-202ENST00000347849 NCOA3Q9Y6Q9 1424 aa26.53■■□□□ 1.84
PTPN18-202ENST00000347849 MEIS3Q99687 375 aa26.53■■□□□ 1.84
PTPN18-202ENST00000347849 CHMP4BQ9H444 224 aaKnown RBP26.53■■□□□ 1.84
PTPN18-202ENST00000347849 ERBB3P21860 1342 aa26.53■■□□□ 1.84
PTPN18-202ENST00000347849 SLC4A10Q6U841 1118 aa26.53■■□□□ 1.84
PTPN18-202ENST00000347849 NCAPD2Q15021 1401 aa26.52■■□□□ 1.84
PTPN18-202ENST00000347849 CHD1LQ86WJ1 897 aa26.52■■□□□ 1.84
PTPN18-202ENST00000347849 RGPD5Q99666 1765 aa26.52■■□□□ 1.84
PTPN18-202ENST00000347849 XRCC6P12956 609 aaKnown RBP eCLIP26.51■■□□□ 1.84
PTPN18-202ENST00000347849 PLEKHO1Q53GL0 409 aaPredicted RBP26.51■■□□□ 1.84
PTPN18-202ENST00000347849 ZNF335Q9H4Z2 1342 aaPredicted RBP26.51■■□□□ 1.83
PTPN18-202ENST00000347849 GOLGA6L3A6NEY3 463 aa26.51■■□□□ 1.83
PTPN18-202ENST00000347849 ANKRD45Q5TZF3 282 aa26.51■■□□□ 1.83
PTPN18-202ENST00000347849 NPHP3Q7Z494 1330 aa26.51■■□□□ 1.83
PTPN18-202ENST00000347849 CHRNA2Q15822 529 aa26.5■■□□□ 1.83
PTPN18-202ENST00000347849 AKAP4Q5JQC9 854 aa26.5■■□□□ 1.83
PTPN18-202ENST00000347849 STRCQ7RTU9 1775 aa26.49■■□□□ 1.83
PTPN18-202ENST00000347849 STK31Q9BXU1 1019 aa26.49■■□□□ 1.83
PTPN18-202ENST00000347849 XIRP1Q702N8 1843 aaKnown RBP26.49■■□□□ 1.83
PTPN18-202ENST00000347849 FLIIQ13045 1269 aa26.48■■□□□ 1.83
PTPN18-202ENST00000347849 CCDC30Q5VVM6 783 aa26.48■■□□□ 1.83
PTPN18-202ENST00000347849 BRINP3Q76B58 766 aa26.48■■□□□ 1.83
PTPN18-202ENST00000347849 CHMP5Q9NZZ3 219 aa26.48■■□□□ 1.83
PTPN18-202ENST00000347849 BABAM1Q9NWV8 329 aa26.48■■□□□ 1.83
PTPN18-202ENST00000347849 ATP10DQ9P241 1426 aa26.48■■□□□ 1.83
PTPN18-202ENST00000347849 EIF4A1P60842 406 aaKnown RBP26.47■■□□□ 1.83
PTPN18-202ENST00000347849 AMOTQ4VCS5 1084 aa26.46■■□□□ 1.83
PTPN18-202ENST00000347849 GCC1Q96CN9 775 aa26.46■■□□□ 1.83
PTPN18-202ENST00000347849 SPATA31A3Q5VYP0 1347 aa26.46■■□□□ 1.83
PTPN18-202ENST00000347849 RNMTO43148 476 aaKnown RBP26.45■■□□□ 1.83
PTPN18-202ENST00000347849 FKBP5Q13451 457 aaPredicted RBP26.45■■□□□ 1.83
PTPN18-202ENST00000347849 NLRP2Q9NX02 1062 aa26.45■■□□□ 1.83
PTPN18-202ENST00000347849 TNS3Q68CZ2 1445 aa26.45■■□□□ 1.83
PTPN18-202ENST00000347849 TRAK2O60296 914 aa26.45■■□□□ 1.82
PTPN18-202ENST00000347849 FSD2A1L4K1 749 aa26.44■■□□□ 1.82
PTPN18-202ENST00000347849 EIF2S2P20042 333 aaKnown RBP26.44■■□□□ 1.82
PTPN18-202ENST00000347849 TEFQ10587 303 aa26.44■■□□□ 1.82
PTPN18-202ENST00000347849 HDGFL1Q5TGJ6 251 aa26.44■■□□□ 1.82
PTPN18-202ENST00000347849 CEP85Q6P2H3 762 aa26.44■■□□□ 1.82
PTPN18-202ENST00000347849 PHAXQ9H814 394 aaKnown RBP26.44■■□□□ 1.82
PTPN18-202ENST00000347849 C1orf141Q5JVX7 400 aa26.44■■□□□ 1.82
PTPN18-202ENST00000347849 PANK2Q9BZ23 570 aa26.44■■□□□ 1.82
PTPN18-202ENST00000347849 BTBD11A6QL63 1104 aa26.43■■□□□ 1.82
PTPN18-202ENST00000347849 ANKRD44Q8N8A2 993 aa26.43■■□□□ 1.82
PTPN18-202ENST00000347849 FAM208AQ9UK61 1670 aaKnown RBP26.43■■□□□ 1.82
PTPN18-202ENST00000347849 LMO7Q8WWI1 1683 aa26.43■■□□□ 1.82
PTPN18-202ENST00000347849 CAMTA1Q9Y6Y1 1673 aa26.42■■□□□ 1.82
PTPN18-202ENST00000347849 HSCBQ8IWL3 235 aa26.41■■□□□ 1.82
PTPN18-202ENST00000347849 DCTPP1Q9H773 170 aa26.41■■□□□ 1.82
PTPN18-202ENST00000347849 ANXA1P04083 346 aa26.4■■□□□ 1.82
PTPN18-202ENST00000347849 CCT4P50991 539 aaKnown RBP26.39■■□□□ 1.82
PTPN18-202ENST00000347849 SLAIN2Q9P270 581 aa26.38■■□□□ 1.81
PTPN18-202ENST00000347849 COL18A1P39060 1754 aa26.38■■□□□ 1.81
PTPN18-202ENST00000347849 PRAMEF22A3QJZ6 481 aa26.38■■□□□ 1.81
PTPN18-202ENST00000347849 CSB-PGBD3P0DP91 1061 aa26.38■■□□□ 1.81
PTPN18-202ENST00000347849 CHPF2Q9P2E5 772 aa26.38■■□□□ 1.81
PTPN18-202ENST00000347849 RPAP2Q8IXW5 612 aaPredicted RBP26.37■■□□□ 1.81
PTPN18-202ENST00000347849 C16orf71Q8IYS4 520 aaPredicted RBP26.37■■□□□ 1.81
PTPN18-202ENST00000347849 KDM3BQ7LBC6 1761 aa26.37■■□□□ 1.81
PTPN18-202ENST00000347849 SOS1Q07889 1333 aaPredicted RBP26.36■■□□□ 1.81
PTPN18-202ENST00000347849 UBE2Q2Q8WVN8 375 aa26.36■■□□□ 1.81
PTPN18-202ENST00000347849 RAPGEF4Q8WZA2 1011 aa26.36■■□□□ 1.81
PTPN18-202ENST00000347849 MEGF6O75095 1541 aa26.36■■□□□ 1.81
PTPN18-202ENST00000347849 APBB1O00213 710 aa26.36■■□□□ 1.81
PTPN18-202ENST00000347849 OTUD7AQ8TE49 926 aaPredicted RBP26.33■■□□□ 1.81
PTPN18-202ENST00000347849 SMARCA5O60264 1052 aaPredicted RBP26.33■■□□□ 1.81
PTPN18-202ENST00000347849 CRYBG1Q9Y4K1 1723 aa26.32■■□□□ 1.8
PTPN18-202ENST00000347849 MRE11P49959 708 aa26.31■■□□□ 1.8
PTPN18-202ENST00000347849 TATP17735 454 aaPredicted RBP26.3■■□□□ 1.8
PTPN18-202ENST00000347849 SLC39A6Q13433 755 aa26.3■■□□□ 1.8
PTPN18-202ENST00000347849 KDM6AO15550 1401 aaPredicted RBP26.3■■□□□ 1.8
PTPN18-202ENST00000347849 DDX11L8A8MPP1 907 aa26.3■■□□□ 1.8
PTPN18-202ENST00000347849 GIGYF1O75420 1035 aaPredicted RBP26.3■■□□□ 1.8
PTPN18-202ENST00000347849 PHKG2P15735 406 aa26.3■■□□□ 1.8
PTPN18-202ENST00000347849 PROSER3Q2NL68 480 aa26.3■■□□□ 1.8
PTPN18-202ENST00000347849 BMP2KLQ5H9B9 411 aa26.3■■□□□ 1.8
PTPN18-202ENST00000347849 PLEKHM2Q8IWE5 1019 aa26.3■■□□□ 1.8
PTPN18-202ENST00000347849 SOS2Q07890 1332 aaPredicted RBP26.3■■□□□ 1.8
PTPN18-202ENST00000347849 RBM25P49756 843 aaKnown RBP26.29■■□□□ 1.8
PTPN18-202ENST00000347849 USP44Q9H0E7 712 aa26.29■■□□□ 1.8
PTPN18-202ENST00000347849 GNAI2P04899 355 aa26.29■■□□□ 1.8
PTPN18-202ENST00000347849 HOXB7P09629 217 aa26.29■■□□□ 1.8
PTPN18-202ENST00000347849 CPDO75976 1380 aa26.28■■□□□ 1.8
PTPN18-202ENST00000347849 PNMA6EA0A0J9YXQ4 647 aa26.28■■□□□ 1.8
PTPN18-202ENST00000347849 OVOS2A0A0G2JMS6 1433 aa26.27■■□□□ 1.8
PTPN18-202ENST00000347849 CYP27B1O15528 508 aa26.27■■□□□ 1.8
PTPN18-202ENST00000347849 GSPT1P15170 499 aaKnown RBP26.27■■□□□ 1.8
PTPN18-202ENST00000347849 HEG1Q9ULI3 1381 aa26.27■■□□□ 1.8
PTPN18-202ENST00000347849 PI4KAP2A4QPH2 592 aa26.27■■□□□ 1.8
PTPN18-202ENST00000347849 PI4KAP1Q8N8J0 262 aa26.27■■□□□ 1.8
PTPN18-202ENST00000347849 NFATC2IPQ8NCF5 419 aa26.27■■□□□ 1.8
PTPN18-202ENST00000347849 GRPEL1Q9HAV7 217 aa26.27■■□□□ 1.8
PTPN18-202ENST00000347849 DDIT3P35638 169 aa26.26■■□□□ 1.79
PTPN18-202ENST00000347849 LRRFIP2Q9Y608 721 aaKnown RBP26.26■■□□□ 1.79
PTPN18-202ENST00000347849 SNX21Q969T3 373 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms