RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 FANCIQ9NVI1 1328 aa24.77■■□□□ 1.56
CHMP4A-201ENST00000347519 CHL1O00533 1208 aa24.77■■□□□ 1.56
CHMP4A-201ENST00000347519 TEFQ10587 303 aa24.77■■□□□ 1.56
CHMP4A-201ENST00000347519 TAF7Q15545 349 aaPredicted RBP24.77■■□□□ 1.56
CHMP4A-201ENST00000347519 MBIPQ9NS73 344 aa24.77■■□□□ 1.56
CHMP4A-201ENST00000347519 KDM3BQ7LBC6 1761 aa24.76■■□□□ 1.55
CHMP4A-201ENST00000347519 GNAI1P63096 354 aa24.76■■□□□ 1.55
CHMP4A-201ENST00000347519 FAM182BQ5T319 152 aa24.76■■□□□ 1.55
CHMP4A-201ENST00000347519 SLC52A2Q9HAB3 445 aa24.76■■□□□ 1.55
CHMP4A-201ENST00000347519 RGS12O14924 1447 aa24.75■■□□□ 1.55
CHMP4A-201ENST00000347519 NFATC2IPQ8NCF5 419 aa24.75■■□□□ 1.55
CHMP4A-201ENST00000347519 KAT6BQ8WYB5 2073 aa24.74■■□□□ 1.55
CHMP4A-201ENST00000347519 ERVV-2B6SEH9 535 aa24.73■■□□□ 1.55
CHMP4A-201ENST00000347519 KCNQ3O43525 872 aa24.73■■□□□ 1.55
CHMP4A-201ENST00000347519 CABP4P57796 275 aa24.73■■□□□ 1.55
CHMP4A-201ENST00000347519 MYH16Q9H6N6 1097 aa24.73■■□□□ 1.55
CHMP4A-201ENST00000347519 TSPYL4Q9UJ04 414 aa24.72■■□□□ 1.55
CHMP4A-201ENST00000347519 ACSBG1Q96GR2 724 aa24.71■■□□□ 1.55
CHMP4A-201ENST00000347519 BTBD11A6QL63 1104 aa24.7■■□□□ 1.55
CHMP4A-201ENST00000347519 SBF2Q86WG5 1849 aa24.7■■□□□ 1.54
CHMP4A-201ENST00000347519 PRIM1P49642 420 aaKnown RBP24.69■■□□□ 1.54
CHMP4A-201ENST00000347519 EXOSC9Q06265 439 aaKnown RBP24.69■■□□□ 1.54
CHMP4A-201ENST00000347519 KRT24Q2M2I5 525 aa24.69■■□□□ 1.54
CHMP4A-201ENST00000347519 PAPPAQ13219 1627 aa24.69■■□□□ 1.54
CHMP4A-201ENST00000347519 SLC39A6Q13433 755 aa24.68■■□□□ 1.54
CHMP4A-201ENST00000347519 KRT27Q7Z3Y8 459 aa24.68■■□□□ 1.54
CHMP4A-201ENST00000347519 PIGBQ92521 554 aa24.68■■□□□ 1.54
CHMP4A-201ENST00000347519 UPF1Q92900 1129 aaKnown RBP eCLIP24.68■■□□□ 1.54
CHMP4A-201ENST00000347519 BABAM1Q9NWV8 329 aa24.68■■□□□ 1.54
CHMP4A-201ENST00000347519 BCL9O00512 1426 aa24.67■■□□□ 1.54
CHMP4A-201ENST00000347519 KCNQ2O43526 872 aa24.67■■□□□ 1.54
CHMP4A-201ENST00000347519 CENPBP07199 599 aaPredicted RBP24.67■■□□□ 1.54
CHMP4A-201ENST00000347519 TMOD3Q9NYL9 352 aa24.67■■□□□ 1.54
CHMP4A-201ENST00000347519 PTF1AQ7RTS3 328 aa24.66■■□□□ 1.54
CHMP4A-201ENST00000347519 C8orf58Q8NAV2 365 aa24.66■■□□□ 1.54
CHMP4A-201ENST00000347519 NHSQ6T4R5 1651 aa24.65■■□□□ 1.54
CHMP4A-201ENST00000347519 TSPYL6Q8N831 410 aa24.65■■□□□ 1.54
CHMP4A-201ENST00000347519 SYTL4Q96C24 671 aaPredicted RBP24.65■■□□□ 1.54
CHMP4A-201ENST00000347519 UBR2Q8IWV8 1755 aa24.64■■□□□ 1.54
CHMP4A-201ENST00000347519 EIF4A1P60842 406 aaKnown RBP24.63■■□□□ 1.53
CHMP4A-201ENST00000347519 ZNF790Q6PG37 636 aa24.63■■□□□ 1.53
CHMP4A-201ENST00000347519 ELL2O00472 640 aaPredicted RBP24.62■■□□□ 1.53
CHMP4A-201ENST00000347519 ASAP1Q9ULH1 1129 aa24.62■■□□□ 1.53
CHMP4A-201ENST00000347519 KCPQ6ZWJ8 1503 aa24.61■■□□□ 1.53
CHMP4A-201ENST00000347519 ATG3Q9NT62 314 aa24.61■■□□□ 1.53
CHMP4A-201ENST00000347519 BTAF1O14981 1849 aa24.6■■□□□ 1.53
CHMP4A-201ENST00000347519 C5P01031 1676 aa24.6■■□□□ 1.53
CHMP4A-201ENST00000347519 HEG1Q9ULI3 1381 aa24.58■■□□□ 1.53
CHMP4A-201ENST00000347519 VAMP4O75379 141 aa24.58■■□□□ 1.53
CHMP4A-201ENST00000347519 ZNF496Q96IT1 587 aaPredicted RBP24.58■■□□□ 1.53
CHMP4A-201ENST00000347519 TWISTNBQ3B726 338 aaPredicted RBP24.57■■□□□ 1.52
CHMP4A-201ENST00000347519 FAM196AQ6ZSG2 479 aa24.57■■□□□ 1.52
CHMP4A-201ENST00000347519 PRAMEF22A3QJZ6 481 aa24.56■■□□□ 1.52
CHMP4A-201ENST00000347519 TTC5Q8N0Z6 440 aa24.55■■□□□ 1.52
CHMP4A-201ENST00000347519 RCAN3Q9UKA8 241 aa24.54■■□□□ 1.52
CHMP4A-201ENST00000347519 PTCD1O75127 700 aaKnown RBP24.54■■□□□ 1.52
CHMP4A-201ENST00000347519 GIGYF1O75420 1035 aaPredicted RBP24.53■■□□□ 1.52
CHMP4A-201ENST00000347519 FMNL2Q96PY5 1086 aa24.53■■□□□ 1.52
CHMP4A-201ENST00000347519 TCERG1O14776 1098 aaKnown RBP24.52■■□□□ 1.52
CHMP4A-201ENST00000347519 SLC4A9Q96Q91 983 aa24.52■■□□□ 1.52
CHMP4A-201ENST00000347519 TRIM37O94972 964 aa24.51■■□□□ 1.51
CHMP4A-201ENST00000347519 CT47B1P0C2W7 299 aaPredicted RBP24.51■■□□□ 1.51
CHMP4A-201ENST00000347519 RARSP54136 660 aaKnown RBP24.51■■□□□ 1.51
CHMP4A-201ENST00000347519 BCL11BQ9C0K0 894 aaPredicted RBP24.51■■□□□ 1.51
CHMP4A-201ENST00000347519 LAMB4A4D0S4 1761 aa24.5■■□□□ 1.51
CHMP4A-201ENST00000347519 TJP1Q07157 1748 aa24.5■■□□□ 1.51
CHMP4A-201ENST00000347519 BCAR3O75815 825 aa24.49■■□□□ 1.51
CHMP4A-201ENST00000347519 SSH1Q8WYL5 1049 aa24.49■■□□□ 1.51
CHMP4A-201ENST00000347519 NECTIN2Q92692 538 aa24.49■■□□□ 1.51
CHMP4A-201ENST00000347519 RBM42Q9BTD8 480 aaKnown RBP24.49■■□□□ 1.51
CHMP4A-201ENST00000347519 BCL2L13Q9BXK5 485 aa24.49■■□□□ 1.51
CHMP4A-201ENST00000347519 PALLDQ8WX93 1383 aa24.49■■□□□ 1.51
CHMP4A-201ENST00000347519 EP400Q96L91 3159 aa24.48■■□□□ 1.51
CHMP4A-201ENST00000347519 SNRPA1P09661 255 aaKnown RBP24.47■■□□□ 1.51
CHMP4A-201ENST00000347519 USP16Q9Y5T5 823 aa24.47■■□□□ 1.51
CHMP4A-201ENST00000347519 LY75O60449 1722 aa24.47■■□□□ 1.51
CHMP4A-201ENST00000347519 TNS1Q9HBL0 1735 aaKnown RBP24.47■■□□□ 1.51
CHMP4A-201ENST00000347519 HOXB7P09629 217 aa24.46■■□□□ 1.51
CHMP4A-201ENST00000347519 EIF2S2P20042 333 aaKnown RBP24.46■■□□□ 1.51
CHMP4A-201ENST00000347519 SUPT16HQ9Y5B9 1047 aaKnown RBP24.46■■□□□ 1.51
CHMP4A-201ENST00000347519 SOS1Q07889 1333 aaPredicted RBP24.46■■□□□ 1.51
CHMP4A-201ENST00000347519 SMARCC1Q92922 1105 aaPredicted RBP24.45■■□□□ 1.5
CHMP4A-201ENST00000347519 HDGFL1Q5TGJ6 251 aa24.44■■□□□ 1.5
CHMP4A-201ENST00000347519 DNAJC10Q8IXB1 793 aa24.44■■□□□ 1.5
CHMP4A-201ENST00000347519 MRPL50Q8N5N7 158 aaKnown RBP24.44■■□□□ 1.5
CHMP4A-201ENST00000347519 LOC102724428A0A0B4J2F2 783 aa24.43■■□□□ 1.5
CHMP4A-201ENST00000347519 SIK1P57059 783 aa24.43■■□□□ 1.5
CHMP4A-201ENST00000347519 ALDH1L2Q3SY69 923 aa24.43■■□□□ 1.5
CHMP4A-201ENST00000347519 VSIG10Q8N0Z9 540 aa24.43■■□□□ 1.5
CHMP4A-201ENST00000347519 ZNF428Q96B54 188 aa24.42■■□□□ 1.5
CHMP4A-201ENST00000347519 SMC4Q9NTJ3 1288 aa24.42■■□□□ 1.5
CHMP4A-201ENST00000347519 CICQ96RK0 1608 aaPredicted RBP24.42■■□□□ 1.5
CHMP4A-201ENST00000347519 ZNF831Q5JPB2 1677 aa24.42■■□□□ 1.5
CHMP4A-201ENST00000347519 KCNQ4P56696 695 aa24.42■■□□□ 1.5
CHMP4A-201ENST00000347519 ITPK1Q13572 414 aa24.42■■□□□ 1.5
CHMP4A-201ENST00000347519 CCDC125Q86Z20 511 aa24.42■■□□□ 1.5
CHMP4A-201ENST00000347519 ANXA1P04083 346 aa24.41■■□□□ 1.5
CHMP4A-201ENST00000347519 CCDC30Q5VVM6 783 aa24.41■■□□□ 1.5
CHMP4A-201ENST00000347519 COL5A3P25940 1745 aaPredicted RBP24.4■■□□□ 1.5
CHMP4A-201ENST00000347519 PROSER3Q2NL68 480 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms