RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 PDCL2Q8N4E4 241 aa17.57■□□□□ 0.4
CUL3-202ENST00000344951 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
CUL3-202ENST00000344951 ERBINQ96RT1 1412 aa17.57■□□□□ 0.4
CUL3-202ENST00000344951 ZFP91Q96JP5 570 aaPredicted RBP17.56■□□□□ 0.4
CUL3-202ENST00000344951 ANKIB1Q9P2G1 1089 aa17.56■□□□□ 0.4
CUL3-202ENST00000344951 NUP62CLQ9H1M0 184 aa17.56■□□□□ 0.4
CUL3-202ENST00000344951 INCENPQ9NQS7 918 aa17.56■□□□□ 0.4
CUL3-202ENST00000344951 TMOD2Q9NZR1 351 aa17.56■□□□□ 0.4
CUL3-202ENST00000344951 CBX1P83916 185 aa17.56■□□□□ 0.4
CUL3-202ENST00000344951 PUF60Q9UHX1 559 aaKnown RBP17.56■□□□□ 0.4
CUL3-202ENST00000344951 SLFN5Q08AF3 891 aa17.56■□□□□ 0.4
CUL3-202ENST00000344951 SCAPERQ9BY12 1400 aa17.56■□□□□ 0.4
CUL3-202ENST00000344951 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
CUL3-202ENST00000344951 STAMBPO95630 424 aa17.55■□□□□ 0.4
CUL3-202ENST00000344951 TRERF1Q96PN7 1200 aa17.55■□□□□ 0.4
CUL3-202ENST00000344951 MRPS9P82933 396 aaKnown RBP17.55■□□□□ 0.4
CUL3-202ENST00000344951 ANKRD1Q15327 319 aa17.55■□□□□ 0.4
CUL3-202ENST00000344951 NUTM1Q86Y26 1132 aa17.55■□□□□ 0.4
CUL3-202ENST00000344951 USP8P40818 1118 aa17.55■□□□□ 0.4
CUL3-202ENST00000344951 CCT4P50991 539 aaKnown RBP17.55■□□□□ 0.4
CUL3-202ENST00000344951 ARL1P40616 181 aaPredicted RBP17.55■□□□□ 0.4
CUL3-202ENST00000344951 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
CUL3-202ENST00000344951 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
CUL3-202ENST00000344951 SEC63Q9UGP8 760 aaKnown RBP17.55■□□□□ 0.4
CUL3-202ENST00000344951 CTNNA2P26232 953 aa17.54■□□□□ 0.4
CUL3-202ENST00000344951 FERMT2Q96AC1 680 aa17.54■□□□□ 0.4
CUL3-202ENST00000344951 KIAA1107Q9UPP5 1409 aa17.54■□□□□ 0.4
CUL3-202ENST00000344951 ERLIN1O75477 346 aa17.54■□□□□ 0.4
CUL3-202ENST00000344951 MIS18AQ9NYP9 233 aa17.54■□□□□ 0.4
CUL3-202ENST00000344951 ZNF530Q6P9A1 599 aaPredicted RBP17.54■□□□□ 0.4
CUL3-202ENST00000344951 LARP1Q6PKG0 1096 aaKnown RBP17.54■□□□□ 0.4
CUL3-202ENST00000344951 CPLX3Q8WVH0 158 aa17.54■□□□□ 0.4
CUL3-202ENST00000344951 DDX23Q9BUQ8 820 aaKnown RBP17.54■□□□□ 0.4
CUL3-202ENST00000344951 ZBTB9Q96C00 473 aa17.54■□□□□ 0.4
CUL3-202ENST00000344951 EIF3JO75822 258 aaKnown RBP17.54■□□□□ 0.4
CUL3-202ENST00000344951 TNIP1Q15025 636 aa17.54■□□□□ 0.4
CUL3-202ENST00000344951 CFAP100Q494V2 611 aa17.54■□□□□ 0.4
CUL3-202ENST00000344951 SLC26A8Q96RN1 970 aa17.53■□□□□ 0.4
CUL3-202ENST00000344951 MKNK2Q9HBH9 465 aa17.53■□□□□ 0.4
CUL3-202ENST00000344951 UPF3BQ9BZI7 483 aaKnown RBP17.53■□□□□ 0.4
CUL3-202ENST00000344951 CBFA2T2O43439 604 aa17.53■□□□□ 0.4
CUL3-202ENST00000344951 HOMER2Q9NSB8 354 aa17.53■□□□□ 0.4
CUL3-202ENST00000344951 IFFO1Q0D2I5 559 aa17.53■□□□□ 0.4
CUL3-202ENST00000344951 AIDAQ96BJ3 306 aa17.53■□□□□ 0.4
CUL3-202ENST00000344951 IGHMBP2P38935 993 aaKnown RBP17.52■□□□□ 0.4
CUL3-202ENST00000344951 RNF187Q5TA31 235 aaPredicted RBP17.52■□□□□ 0.4
CUL3-202ENST00000344951 VTI1AQ96AJ9 217 aa17.52■□□□□ 0.4
CUL3-202ENST00000344951 BTBD11A6QL63 1104 aa17.52■□□□□ 0.4
CUL3-202ENST00000344951 ZNF397Q8NF99 534 aaPredicted RBP17.52■□□□□ 0.4
CUL3-202ENST00000344951 CACNA2D4Q7Z3S7 1137 aa17.52■□□□□ 0.39
CUL3-202ENST00000344951 ARHGAP29Q52LW3 1261 aa17.51■□□□□ 0.39
CUL3-202ENST00000344951 PRAM1Q96QH2 718 aa17.51■□□□□ 0.39
CUL3-202ENST00000344951 ARHGAP5Q13017 1502 aa17.51■□□□□ 0.39
CUL3-202ENST00000344951 APBB1IPQ7Z5R6 666 aaPredicted RBP17.51■□□□□ 0.39
CUL3-202ENST00000344951 VAT1LQ9HCJ6 419 aa17.51■□□□□ 0.39
CUL3-202ENST00000344951 PTCD1O75127 700 aaKnown RBP17.51■□□□□ 0.39
CUL3-202ENST00000344951 TMCO3Q6UWJ1 677 aa17.51■□□□□ 0.39
CUL3-202ENST00000344951 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
CUL3-202ENST00000344951 LARP6Q9BRS8 491 aaKnown RBP17.51■□□□□ 0.39
CUL3-202ENST00000344951 PPFIA3O75145 1194 aa17.51■□□□□ 0.39
CUL3-202ENST00000344951 ZC3H6P61129 1189 aaKnown RBP17.51■□□□□ 0.39
CUL3-202ENST00000344951 TXLNBQ8N3L3 684 aa17.51■□□□□ 0.39
CUL3-202ENST00000344951 PRPF4BQ13523 1007 aaKnown RBP17.5■□□□□ 0.39
CUL3-202ENST00000344951 SSFA2P28290 1259 aa17.5■□□□□ 0.39
CUL3-202ENST00000344951 FERMT3Q86UX7 667 aa17.5■□□□□ 0.39
CUL3-202ENST00000344951 CCDC144CPQ8IYA2 1237 aa17.5■□□□□ 0.39
CUL3-202ENST00000344951 METTL24Q5JXM2 366 aa17.5■□□□□ 0.39
CUL3-202ENST00000344951 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
CUL3-202ENST00000344951 BLOC1S2Q6QNY1 142 aa17.5■□□□□ 0.39
CUL3-202ENST00000344951 IQCEQ6IPM2 695 aa17.5■□□□□ 0.39
CUL3-202ENST00000344951 SRGAP3O43295 1099 aa17.49■□□□□ 0.39
CUL3-202ENST00000344951 CASTP20810 708 aaKnown RBP17.49■□□□□ 0.39
CUL3-202ENST00000344951 SPA17Q15506 151 aa17.49■□□□□ 0.39
CUL3-202ENST00000344951 TBC1D2Q9BYX2 928 aa17.49■□□□□ 0.39
CUL3-202ENST00000344951 SMARCA5O60264 1052 aaPredicted RBP17.49■□□□□ 0.39
CUL3-202ENST00000344951 ADAMTS2O95450 1211 aa17.49■□□□□ 0.39
CUL3-202ENST00000344951 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
CUL3-202ENST00000344951 MAP3K11Q16584 847 aa17.49■□□□□ 0.39
CUL3-202ENST00000344951 PPP1R12BO60237 982 aaPredicted RBP17.49■□□□□ 0.39
CUL3-202ENST00000344951 RANBP6O60518 1105 aaKnown RBP17.48■□□□□ 0.39
CUL3-202ENST00000344951 CETN2P41208 172 aa17.48■□□□□ 0.39
CUL3-202ENST00000344951 CCDC150Q8NCX0 1101 aa17.48■□□□□ 0.39
CUL3-202ENST00000344951 TNPO1Q92973 898 aaKnown RBP17.48■□□□□ 0.39
CUL3-202ENST00000344951 SRCIN1Q9C0H9 1055 aa17.48■□□□□ 0.39
CUL3-202ENST00000344951 SPG7Q9UQ90 795 aa17.48■□□□□ 0.39
CUL3-202ENST00000344951 LMAN1P49257 510 aa17.48■□□□□ 0.39
CUL3-202ENST00000344951 ZSCAN31Q96LW9 406 aaPredicted RBP17.48■□□□□ 0.39
CUL3-202ENST00000344951 PABPN1LA6NDY0 278 aaKnown RBP17.48■□□□□ 0.39
CUL3-202ENST00000344951 LUZP1Q86V48 1076 aa17.48■□□□□ 0.39
CUL3-202ENST00000344951 HOOK3Q86VS8 718 aa17.48■□□□□ 0.39
CUL3-202ENST00000344951 HFM1A2PYH4 1435 aa17.48■□□□□ 0.39
CUL3-202ENST00000344951 CASQ1P31415 396 aa17.47■□□□□ 0.39
CUL3-202ENST00000344951 POLR3GO15318 223 aaPredicted RBP17.47■□□□□ 0.39
CUL3-202ENST00000344951 ZPR1O75312 459 aa17.47■□□□□ 0.39
CUL3-202ENST00000344951 ISM2Q6H9L7 571 aa17.47■□□□□ 0.39
CUL3-202ENST00000344951 CABP1Q9NZU7 370 aa17.47■□□□□ 0.39
CUL3-202ENST00000344951 TDRD12Q587J7 1177 aaKnown RBP17.47■□□□□ 0.39
CUL3-202ENST00000344951 SAMM50Q9Y512 469 aa17.47■□□□□ 0.39
CUL3-202ENST00000344951 DZIP1Q86YF9 867 aaKnown RBP17.47■□□□□ 0.39
CUL3-202ENST00000344951 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms