RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 POLA1P09884 1462 aaPredicted RBP9.22□□□□□ -0.93
KPNA1-201ENST00000344337 KLHL40Q2TBA0 621 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 H0YHG0 523 aa9.21□□□□□ -0.93
KPNA1-201ENST00000344337 HSP90AB2PQ58FF8 381 aa9.21□□□□□ -0.93
KPNA1-201ENST00000344337 G2E3Q7L622 706 aa9.21□□□□□ -0.93
KPNA1-201ENST00000344337 CERS3Q8IU89 383 aa9.21□□□□□ -0.93
KPNA1-201ENST00000344337 GNAI3P08754 354 aa9.21□□□□□ -0.94
KPNA1-201ENST00000344337 STX6O43752 255 aa9.21□□□□□ -0.94
KPNA1-201ENST00000344337 RXRAP19793 462 aa9.21□□□□□ -0.94
KPNA1-201ENST00000344337 ESCO1Q5FWF5 840 aa9.21□□□□□ -0.94
KPNA1-201ENST00000344337 LRSAM1Q6UWE0 723 aa9.21□□□□□ -0.94
KPNA1-201ENST00000344337 TRMT1LQ7Z2T5 733 aaKnown RBP9.21□□□□□ -0.94
KPNA1-201ENST00000344337 TMC6Q7Z403 805 aa9.21□□□□□ -0.94
KPNA1-201ENST00000344337 TMEM63CQ9P1W3 806 aa9.21□□□□□ -0.94
KPNA1-201ENST00000344337 CCDC183Q5T5S1 534 aa9.21□□□□□ -0.94
KPNA1-201ENST00000344337 TTC22Q5TAA0 569 aa9.21□□□□□ -0.94
KPNA1-201ENST00000344337 RAB3GAP1Q15042 981 aa9.2□□□□□ -0.94
KPNA1-201ENST00000344337 DACT1Q9NYF0 836 aa9.2□□□□□ -0.94
KPNA1-201ENST00000344337 OLFM4Q6UX06 510 aa9.2□□□□□ -0.94
KPNA1-201ENST00000344337 NSFL1CQ9UNZ2 370 aaKnown RBP9.2□□□□□ -0.94
KPNA1-201ENST00000344337 ZNF165P49910 485 aa9.2□□□□□ -0.94
KPNA1-201ENST00000344337 SRCIN1Q9C0H9 1055 aa9.2□□□□□ -0.94
KPNA1-201ENST00000344337 CIZ1Q9ULV3 898 aaPredicted RBP9.2□□□□□ -0.94
KPNA1-201ENST00000344337 EID1Q9Y6B2 187 aa9.2□□□□□ -0.94
KPNA1-201ENST00000344337 HSP90B2PQ58FF3 399 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 KLHDC4Q8TBB5 520 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 TSPYL1Q9H0U9 437 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 EVA1CP58658 441 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 BMP2KLQ5H9B9 411 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 PPP1R42Q7Z4L9 355 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 PLEKHH2Q8IVE3 1493 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 MARCKSP29966 332 aaPredicted RBP9.19□□□□□ -0.94
KPNA1-201ENST00000344337 ARGLU1Q9NWB6 273 aaPredicted RBP9.19□□□□□ -0.94
KPNA1-201ENST00000344337 VPS37DQ86XT2 251 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 ZKSCAN5Q9Y2L8 839 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 CAMSAP2Q08AD1 1489 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 ROCK1Q13464 1354 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 LRMPQ12912 555 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 DDX46Q7L014 1031 aaKnown RBP9.19□□□□□ -0.94
KPNA1-201ENST00000344337 UBXN4Q92575 508 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 RAI14Q9P0K7 980 aa9.19□□□□□ -0.94
KPNA1-201ENST00000344337 BTBD11A6QL63 1104 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
KPNA1-201ENST00000344337 ZHX3Q9H4I2 956 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 TPM1P09493 284 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 MCM6Q14566 821 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 ZNF530Q6P9A1 599 aaPredicted RBP9.18□□□□□ -0.94
KPNA1-201ENST00000344337 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 PI4KAP2A4QPH2 592 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 GPS2Q13227 327 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 PI4KAP1Q8N8J0 262 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 EHBP1L1Q8N3D4 1523 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 PSMA5P28066 241 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 MATR3P43243 847 aaKnown RBP eCLIP9.18□□□□□ -0.94
KPNA1-201ENST00000344337 NINLQ9Y2I6 1382 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 RIOK3O14730 519 aaKnown RBP9.18□□□□□ -0.94
KPNA1-201ENST00000344337 IDH1O75874 414 aaKnown RBP9.18□□□□□ -0.94
KPNA1-201ENST00000344337 ERCC3P19447 782 aa9.18□□□□□ -0.94
KPNA1-201ENST00000344337 LMOD1P29536 600 aaPredicted RBP9.18□□□□□ -0.94
KPNA1-201ENST00000344337 FSIP1Q8NA03 581 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 FAM107BQ9H098 131 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 LMAN1P49257 510 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 DNAJC21Q5F1R6 531 aaKnown RBP9.17□□□□□ -0.94
KPNA1-201ENST00000344337 NUDT16Q96DE0 195 aaKnown RBP9.17□□□□□ -0.94
KPNA1-201ENST00000344337 PLEKHA4Q9H4M7 779 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 CEP135Q66GS9 1140 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 CPLX2Q6PUV4 134 aaKnown RBP9.17□□□□□ -0.94
KPNA1-201ENST00000344337 EDC3Q96F86 508 aaKnown RBP9.17□□□□□ -0.94
KPNA1-201ENST00000344337 ZBTB40Q9NUA8 1239 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 CC2D2AQ9P2K1 1620 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 FCHSD2O94868 740 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 PDE1AP54750 535 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 AK2P54819 239 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 SLC39A6Q13433 755 aa9.17□□□□□ -0.94
KPNA1-201ENST00000344337 NAT10Q9H0A0 1025 aaKnown RBP9.17□□□□□ -0.94
KPNA1-201ENST00000344337 DDX58O95786 925 aaKnown RBP9.16□□□□□ -0.94
KPNA1-201ENST00000344337 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 MTERF4Q7Z6M4 381 aaKnown RBP9.16□□□□□ -0.94
KPNA1-201ENST00000344337 RUFY1Q96T51 708 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 MYD88Q99836 296 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 UNC13AQ9UPW8 1703 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 ATP2B2Q01814 1243 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 KDM6BO15054 1643 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 ATP2C2O75185 946 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 OFD1O75665 1012 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 KARSQ15046 597 aaKnown RBP9.16□□□□□ -0.94
KPNA1-201ENST00000344337 SPECC1Q5M775 1068 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 OTUD7BQ6GQQ9 843 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 CCDC129Q6ZRS4 1044 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 IQSEC3Q9UPP2 1182 aaPredicted RBP9.16□□□□□ -0.94
KPNA1-201ENST00000344337 CEBPAP49715 358 aaPredicted RBP9.16□□□□□ -0.94
KPNA1-201ENST00000344337 DNAI1Q9UI46 699 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 LIMCH1Q9UPQ0 1083 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 SBNO2Q9Y2G9 1366 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 NCAPD3P42695 1498 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 IPO7O95373 1038 aaKnown RBP9.16□□□□□ -0.94
KPNA1-201ENST00000344337 MCM2P49736 904 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 IDI1Q13907 227 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 GPT2Q8TD30 523 aa9.16□□□□□ -0.94
KPNA1-201ENST00000344337 CCDC66A2RUB6 948 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms