RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 NFATC2IPQ8NCF5 419 aa28.95■■■□□ 2.22
RBM38-201ENST00000342690 SIPA1L3O60292 1781 aaPredicted RBP28.95■■■□□ 2.22
RBM38-201ENST00000342690 DCTN1Q14203 1278 aa28.94■■■□□ 2.22
RBM38-201ENST00000342690 MCM10Q7L590 875 aa28.94■■■□□ 2.22
RBM38-201ENST00000342690 RTF1Q92541 710 aaKnown RBP28.94■■■□□ 2.22
RBM38-201ENST00000342690 PALLDQ8WX93 1383 aa28.93■■■□□ 2.22
RBM38-201ENST00000342690 HTATSF1O43719 755 aaKnown RBP28.93■■■□□ 2.22
RBM38-201ENST00000342690 PROM2Q8N271 834 aa28.93■■■□□ 2.22
RBM38-201ENST00000342690 RRP7AQ9Y3A4 280 aaKnown RBP28.93■■■□□ 2.22
RBM38-201ENST00000342690 PAPPAQ13219 1627 aa28.93■■■□□ 2.22
RBM38-201ENST00000342690 TXNRD1Q16881 649 aa28.92■■■□□ 2.22
RBM38-201ENST00000342690 ASAP1Q9ULH1 1129 aa28.92■■■□□ 2.22
RBM38-201ENST00000342690 RIPK4P57078 832 aa28.91■■■□□ 2.22
RBM38-201ENST00000342690 ATG3Q9NT62 314 aa28.91■■■□□ 2.22
RBM38-201ENST00000342690 SMARCC1Q92922 1105 aaPredicted RBP28.9■■■□□ 2.22
RBM38-201ENST00000342690 APAF1O14727 1248 aa28.89■■■□□ 2.22
RBM38-201ENST00000342690 TEFQ10587 303 aa28.89■■■□□ 2.22
RBM38-201ENST00000342690 NEUROD2Q15784 382 aa28.88■■■□□ 2.21
RBM38-201ENST00000342690 THUMPD2Q9BTF0 503 aaKnown RBP28.86■■■□□ 2.21
RBM38-201ENST00000342690 LMOD3Q0VAK6 560 aa28.85■■■□□ 2.21
RBM38-201ENST00000342690 LRRC4BQ9NT99 713 aa28.85■■■□□ 2.21
RBM38-201ENST00000342690 KCNQ4P56696 695 aa28.84■■■□□ 2.21
RBM38-201ENST00000342690 SLC27A3Q5K4L6 730 aa28.84■■■□□ 2.21
RBM38-201ENST00000342690 CCNL1Q9UK58 526 aaPredicted RBP28.84■■■□□ 2.21
RBM38-201ENST00000342690 SLC39A6Q13433 755 aa28.83■■■□□ 2.21
RBM38-201ENST00000342690 TRIM35Q9UPQ4 493 aa28.83■■■□□ 2.21
RBM38-201ENST00000342690 UBR2Q8IWV8 1755 aa28.83■■■□□ 2.21
RBM38-201ENST00000342690 KCPQ6ZWJ8 1503 aa28.82■■■□□ 2.2
RBM38-201ENST00000342690 LOC102724428A0A0B4J2F2 783 aa28.81■■■□□ 2.2
RBM38-201ENST00000342690 SIK1P57059 783 aa28.81■■■□□ 2.2
RBM38-201ENST00000342690 TAF1LQ8IZX4 1826 aa28.8■■■□□ 2.2
RBM38-201ENST00000342690 C5P01031 1676 aa28.8■■■□□ 2.2
RBM38-201ENST00000342690 SENP3-EIF4A1A0A087X0R7 540 aa28.8■■■□□ 2.2
RBM38-201ENST00000342690 ZNF831Q5JPB2 1677 aa28.8■■■□□ 2.2
RBM38-201ENST00000342690 RBM42Q9BTD8 480 aaKnown RBP28.79■■■□□ 2.2
RBM38-201ENST00000342690 BTBD11A6QL63 1104 aa28.78■■■□□ 2.2
RBM38-201ENST00000342690 PTCD1O75127 700 aaKnown RBP28.78■■■□□ 2.2
RBM38-201ENST00000342690 SLC4A9Q96Q91 983 aa28.78■■■□□ 2.2
RBM38-201ENST00000342690 ANO8Q9HCE9 1232 aaPredicted RBP28.78■■■□□ 2.2
RBM38-201ENST00000342690 TAF7Q15545 349 aaPredicted RBP28.77■■■□□ 2.2
RBM38-201ENST00000342690 KDM3BQ7LBC6 1761 aa28.77■■■□□ 2.2
RBM38-201ENST00000342690 CICQ96RK0 1608 aaPredicted RBP28.76■■■□□ 2.2
RBM38-201ENST00000342690 ZNF790Q6PG37 636 aa28.76■■■□□ 2.19
RBM38-201ENST00000342690 TJP1Q07157 1748 aa28.76■■■□□ 2.19
RBM38-201ENST00000342690 KCNQ3O43525 872 aa28.75■■■□□ 2.19
RBM38-201ENST00000342690 ATP6V1AP38606 617 aa28.75■■■□□ 2.19
RBM38-201ENST00000342690 ITPK1Q13572 414 aa28.75■■■□□ 2.19
RBM38-201ENST00000342690 TTC5Q8N0Z6 440 aa28.75■■■□□ 2.19
RBM38-201ENST00000342690 NGEFQ8N5V2 710 aa28.75■■■□□ 2.19
RBM38-201ENST00000342690 NCBP3Q53F19 620 aaKnown RBP28.74■■■□□ 2.19
RBM38-201ENST00000342690 NBPF14Q5TI25 921 aa28.74■■■□□ 2.19
RBM38-201ENST00000342690 C4BP0C0L5 1744 aa28.73■■■□□ 2.19
RBM38-201ENST00000342690 COL5A3P25940 1745 aaPredicted RBP28.73■■■□□ 2.19
RBM38-201ENST00000342690 MIS18AQ9NYP9 233 aa28.73■■■□□ 2.19
RBM38-201ENST00000342690 ZNF827Q17R98 1081 aa28.72■■■□□ 2.19
RBM38-201ENST00000342690 CCDC27Q2M243 656 aa28.71■■■□□ 2.19
RBM38-201ENST00000342690 LINC00116Q8NCU8 138 aa28.71■■■□□ 2.19
RBM38-201ENST00000342690 ZNF496Q96IT1 587 aaPredicted RBP28.71■■■□□ 2.19
RBM38-201ENST00000342690 SALL2Q9Y467 1007 aaPredicted RBP28.71■■■□□ 2.19
RBM38-201ENST00000342690 STK32BQ9NY57 414 aa28.7■■■□□ 2.18
RBM38-201ENST00000342690 TUBGCP6Q96RT7 1819 aa28.69■■■□□ 2.18
RBM38-201ENST00000342690 AKT1S1Q96B36 256 aa28.69■■■□□ 2.18
RBM38-201ENST00000342690 HEG1Q9ULI3 1381 aa28.68■■■□□ 2.18
RBM38-201ENST00000342690 CALD1Q05682 793 aaKnown RBP28.68■■■□□ 2.18
RBM38-201ENST00000342690 R3HDM1Q15032 1099 aaKnown RBP28.68■■■□□ 2.18
RBM38-201ENST00000342690 SLC15A2Q16348 729 aa28.68■■■□□ 2.18
RBM38-201ENST00000342690 PSDA5PKW4 1024 aaPredicted RBP28.67■■■□□ 2.18
RBM38-201ENST00000342690 FMNL2Q96PY5 1086 aa28.67■■■□□ 2.18
RBM38-201ENST00000342690 TSPYL4Q9UJ04 414 aa28.67■■■□□ 2.18
RBM38-201ENST00000342690 WWC1Q8IX03 1113 aa28.66■■■□□ 2.18
RBM38-201ENST00000342690 DNAJC10Q8IXB1 793 aa28.66■■■□□ 2.18
RBM38-201ENST00000342690 VSIG10Q8N0Z9 540 aa28.66■■■□□ 2.18
RBM38-201ENST00000342690 QSER1Q2KHR3 1735 aa28.66■■■□□ 2.18
RBM38-201ENST00000342690 HNRNPUQ00839 825 aaKnown RBP eCLIP28.65■■■□□ 2.18
RBM38-201ENST00000342690 BABAM1Q9NWV8 329 aa28.65■■■□□ 2.18
RBM38-201ENST00000342690 HMGB2P26583 209 aaKnown RBP28.64■■■□□ 2.18
RBM38-201ENST00000342690 LAS1LQ9Y4W2 734 aaKnown RBP28.64■■■□□ 2.18
RBM38-201ENST00000342690 CHL1O00533 1208 aa28.63■■■□□ 2.17
RBM38-201ENST00000342690 UBR3Q6ZT12 1888 aa28.62■■■□□ 2.17
RBM38-201ENST00000342690 EIF4A1P60842 406 aaKnown RBP28.62■■■□□ 2.17
RBM38-201ENST00000342690 CNTNAP4Q9C0A0 1308 aa28.62■■■□□ 2.17
RBM38-201ENST00000342690 MYH14Q7Z406 1995 aaKnown RBP28.61■■■□□ 2.17
RBM38-201ENST00000342690 ZNF853P0CG23 659 aa28.61■■■□□ 2.17
RBM38-201ENST00000342690 AK7Q96M32 723 aa28.61■■■□□ 2.17
RBM38-201ENST00000342690 CFAP44Q96MT7 982 aa28.61■■■□□ 2.17
RBM38-201ENST00000342690 CASZ1Q86V15 1759 aa28.6■■■□□ 2.17
RBM38-201ENST00000342690 IFT57Q9NWB7 429 aa28.6■■■□□ 2.17
RBM38-201ENST00000342690 TFCP2L1Q9NZI6 479 aa28.6■■■□□ 2.17
RBM38-201ENST00000342690 PRAMEF22A3QJZ6 481 aa28.59■■■□□ 2.17
RBM38-201ENST00000342690 CYP19A1P11511 503 aaPredicted RBP28.59■■■□□ 2.17
RBM38-201ENST00000342690 CRKLP46109 303 aaKnown RBP28.59■■■□□ 2.17
RBM38-201ENST00000342690 WDR63Q8IWG1 891 aa28.59■■■□□ 2.17
RBM38-201ENST00000342690 LAMB4A4D0S4 1761 aa28.59■■■□□ 2.17
RBM38-201ENST00000342690 RC3H1Q5TC82 1133 aaKnown RBP28.58■■■□□ 2.17
RBM38-201ENST00000342690 AMIGO3Q86WK7 504 aa28.58■■■□□ 2.17
RBM38-201ENST00000342690 GNPATO15228 680 aa28.57■■■□□ 2.16
RBM38-201ENST00000342690 SNRPA1P09661 255 aaKnown RBP28.57■■■□□ 2.16
RBM38-201ENST00000342690 GNAI1P63096 354 aa28.57■■■□□ 2.16
RBM38-201ENST00000342690 MBIPQ9NS73 344 aa28.57■■■□□ 2.16
RBM38-201ENST00000342690 IL16Q14005 1332 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms