RNA–Protein interactions for RNA: ENST00000342628.6

FOXM1-201, Transcript of forkhead box M1, humanhuman

TSL 1 (best) BASIC

Gene FOXM1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-201ENST00000342628 ZNF521Q96K83 1311 aa10.64□□□□□ -0.71
FOXM1-201ENST00000342628 BTBD11A6QL63 1104 aa10.64□□□□□ -0.71
FOXM1-201ENST00000342628 NFATC2IPQ8NCF5 419 aa10.64□□□□□ -0.71
FOXM1-201ENST00000342628 BABAM1Q9NWV8 329 aa10.64□□□□□ -0.71
FOXM1-201ENST00000342628 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
FOXM1-201ENST00000342628 KDM6AO15550 1401 aaPredicted RBP10.64□□□□□ -0.71
FOXM1-201ENST00000342628 TTC5Q8N0Z6 440 aa10.64□□□□□ -0.71
FOXM1-201ENST00000342628 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
FOXM1-201ENST00000342628 SLFN5Q08AF3 891 aa10.63□□□□□ -0.71
FOXM1-201ENST00000342628 FAM182BQ5T319 152 aa10.63□□□□□ -0.71
FOXM1-201ENST00000342628 BRWD3Q6RI45 1802 aa10.63□□□□□ -0.71
FOXM1-201ENST00000342628 RGS12O14924 1447 aa10.63□□□□□ -0.71
FOXM1-201ENST00000342628 CDCA7LQ96GN5 454 aa10.63□□□□□ -0.71
FOXM1-201ENST00000342628 CHL1O00533 1208 aa10.62□□□□□ -0.71
FOXM1-201ENST00000342628 MIS18AQ9NYP9 233 aa10.62□□□□□ -0.71
FOXM1-201ENST00000342628 TSR2Q969E8 191 aaKnown RBP10.61□□□□□ -0.71
FOXM1-201ENST00000342628 MBIPQ9NS73 344 aa10.61□□□□□ -0.71
FOXM1-201ENST00000342628 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
FOXM1-201ENST00000342628 ZNF853P0CG23 659 aa10.6□□□□□ -0.71
FOXM1-201ENST00000342628 DOT1LQ8TEK3 1739 aa10.6□□□□□ -0.71
FOXM1-201ENST00000342628 PIGBQ92521 554 aa10.6□□□□□ -0.71
FOXM1-201ENST00000342628 SMARCC1Q92922 1105 aaPredicted RBP10.6□□□□□ -0.71
FOXM1-201ENST00000342628 ITGB4P16144 1822 aa10.6□□□□□ -0.71
FOXM1-201ENST00000342628 FANCIQ9NVI1 1328 aa10.6□□□□□ -0.71
FOXM1-201ENST00000342628 BCL9O00512 1426 aa10.6□□□□□ -0.71
FOXM1-201ENST00000342628 ZNF790Q6PG37 636 aa10.6□□□□□ -0.71
FOXM1-201ENST00000342628 CHMP4AQ9BY43 222 aa10.6□□□□□ -0.71
FOXM1-201ENST00000342628 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
FOXM1-201ENST00000342628 SLC39A6Q13433 755 aa10.59□□□□□ -0.71
FOXM1-201ENST00000342628 MRC1P22897 1456 aa10.59□□□□□ -0.71
FOXM1-201ENST00000342628 KCNA4P22459 653 aa10.59□□□□□ -0.71
FOXM1-201ENST00000342628 KCNQ2O43526 872 aa10.59□□□□□ -0.71
FOXM1-201ENST00000342628 DUSP27Q5VZP5 1158 aa10.59□□□□□ -0.71
FOXM1-201ENST00000342628 FMNL2Q96PY5 1086 aa10.59□□□□□ -0.71
FOXM1-201ENST00000342628 BCL11BQ9C0K0 894 aaPredicted RBP10.59□□□□□ -0.71
FOXM1-201ENST00000342628 TOGARAM1Q9Y4F4 1720 aa10.58□□□□□ -0.72
FOXM1-201ENST00000342628 EXOSC9Q06265 439 aaKnown RBP10.58□□□□□ -0.72
FOXM1-201ENST00000342628 RBM42Q9BTD8 480 aaKnown RBP10.58□□□□□ -0.72
FOXM1-201ENST00000342628 TRIM37O94972 964 aa10.58□□□□□ -0.72
FOXM1-201ENST00000342628 SIPA1L3O60292 1781 aaPredicted RBP10.58□□□□□ -0.72
FOXM1-201ENST00000342628 SF3B2Q13435 895 aaKnown RBP10.57□□□□□ -0.72
FOXM1-201ENST00000342628 TRMT2AQ8IZ69 625 aaKnown RBP10.57□□□□□ -0.72
FOXM1-201ENST00000342628 PTCD1O75127 700 aaKnown RBP10.57□□□□□ -0.72
FOXM1-201ENST00000342628 ASAP1Q9ULH1 1129 aa10.57□□□□□ -0.72
FOXM1-201ENST00000342628 ELL2O00472 640 aaPredicted RBP10.57□□□□□ -0.72
FOXM1-201ENST00000342628 EIF4A1P60842 406 aaKnown RBP10.57□□□□□ -0.72
FOXM1-201ENST00000342628 ATG3Q9NT62 314 aa10.57□□□□□ -0.72
FOXM1-201ENST00000342628 SBF2Q86WG5 1849 aa10.56□□□□□ -0.72
FOXM1-201ENST00000342628 KCNQ3O43525 872 aa10.56□□□□□ -0.72
FOXM1-201ENST00000342628 CT47B1P0C2W7 299 aaPredicted RBP10.56□□□□□ -0.72
FOXM1-201ENST00000342628 TWISTNBQ3B726 338 aaPredicted RBP10.56□□□□□ -0.72
FOXM1-201ENST00000342628 NHSQ6T4R5 1651 aa10.56□□□□□ -0.72
FOXM1-201ENST00000342628 EIF5BO60841 1220 aaKnown RBP10.56□□□□□ -0.72
FOXM1-201ENST00000342628 SOS1Q07889 1333 aaPredicted RBP10.56□□□□□ -0.72
FOXM1-201ENST00000342628 SNRPA1P09661 255 aaKnown RBP10.56□□□□□ -0.72
FOXM1-201ENST00000342628 KDM3BQ7LBC6 1761 aa10.55□□□□□ -0.72
FOXM1-201ENST00000342628 HMGB2P26583 209 aaKnown RBP10.55□□□□□ -0.72
FOXM1-201ENST00000342628 ZNF496Q96IT1 587 aaPredicted RBP10.55□□□□□ -0.72
FOXM1-201ENST00000342628 TEX13AQ9BXU3 409 aaPredicted RBP10.55□□□□□ -0.72
FOXM1-201ENST00000342628 APBA3O96018 575 aa10.54□□□□□ -0.72
FOXM1-201ENST00000342628 HOXB7P09629 217 aa10.54□□□□□ -0.72
FOXM1-201ENST00000342628 C8orf58Q8NAV2 365 aa10.54□□□□□ -0.72
FOXM1-201ENST00000342628 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
FOXM1-201ENST00000342628 PALLDQ8WX93 1383 aa10.54□□□□□ -0.72
FOXM1-201ENST00000342628 EIF2S2P20042 333 aaKnown RBP10.54□□□□□ -0.72
FOXM1-201ENST00000342628 VSIG10Q8N0Z9 540 aa10.54□□□□□ -0.72
FOXM1-201ENST00000342628 HEG1Q9ULI3 1381 aa10.54□□□□□ -0.72
FOXM1-201ENST00000342628 BTAF1O14981 1849 aa10.54□□□□□ -0.72
FOXM1-201ENST00000342628 ATP6V1AP38606 617 aa10.53□□□□□ -0.72
FOXM1-201ENST00000342628 STK31Q9BXU1 1019 aa10.53□□□□□ -0.72
FOXM1-201ENST00000342628 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
FOXM1-201ENST00000342628 GIGYF1O75420 1035 aaPredicted RBP10.53□□□□□ -0.72
FOXM1-201ENST00000342628 STARD3NLO95772 234 aa10.53□□□□□ -0.72
FOXM1-201ENST00000342628 SIK1P57059 783 aa10.53□□□□□ -0.72
FOXM1-201ENST00000342628 KRT24Q2M2I5 525 aa10.53□□□□□ -0.72
FOXM1-201ENST00000342628 HDGFL1Q5TGJ6 251 aa10.53□□□□□ -0.72
FOXM1-201ENST00000342628 CCDC30Q5VVM6 783 aa10.53□□□□□ -0.72
FOXM1-201ENST00000342628 NPM2Q86SE8 214 aaKnown RBP10.53□□□□□ -0.72
FOXM1-201ENST00000342628 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
FOXM1-201ENST00000342628 VAMP4O75379 141 aa10.52□□□□□ -0.72
FOXM1-201ENST00000342628 PTF1AQ7RTS3 328 aa10.52□□□□□ -0.72
FOXM1-201ENST00000342628 RCAN3Q9UKA8 241 aa10.52□□□□□ -0.73
FOXM1-201ENST00000342628 BAG6P46379 1132 aa10.52□□□□□ -0.73
FOXM1-201ENST00000342628 CCDC125Q86Z20 511 aa10.52□□□□□ -0.73
FOXM1-201ENST00000342628 NECTIN2Q92692 538 aa10.52□□□□□ -0.73
FOXM1-201ENST00000342628 CCNL1Q9UK58 526 aaPredicted RBP10.52□□□□□ -0.73
FOXM1-201ENST00000342628 PAPPAQ13219 1627 aa10.51□□□□□ -0.73
FOXM1-201ENST00000342628 SMC4Q9NTJ3 1288 aa10.51□□□□□ -0.73
FOXM1-201ENST00000342628 PLSCR1O15162 318 aa10.5□□□□□ -0.73
FOXM1-201ENST00000342628 ALDH1L2Q3SY69 923 aa10.5□□□□□ -0.73
FOXM1-201ENST00000342628 DNAJC10Q8IXB1 793 aa10.5□□□□□ -0.73
FOXM1-201ENST00000342628 UBR2Q8IWV8 1755 aa10.5□□□□□ -0.73
FOXM1-201ENST00000342628 SLC27A3Q5K4L6 730 aa10.5□□□□□ -0.73
FOXM1-201ENST00000342628 USP16Q9Y5T5 823 aa10.5□□□□□ -0.73
FOXM1-201ENST00000342628 KCPQ6ZWJ8 1503 aa10.5□□□□□ -0.73
FOXM1-201ENST00000342628 CANXP27824 592 aaKnown RBP10.5□□□□□ -0.73
FOXM1-201ENST00000342628 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.5□□□□□ -0.73
FOXM1-201ENST00000342628 DBF4Q9UBU7 674 aaPredicted RBP10.49□□□□□ -0.73
FOXM1-201ENST00000342628 TCERG1O14776 1098 aaKnown RBP10.49□□□□□ -0.73
FOXM1-201ENST00000342628 PRAMEF22A3QJZ6 481 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms