RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 SUPT16HQ9Y5B9 1047 aaKnown RBP26.78■■□□□ 1.88
CLDND1-201ENST00000341181 SLC52A2Q9HAB3 445 aa26.77■■□□□ 1.88
CLDND1-201ENST00000341181 TSPYL4Q9UJ04 414 aa26.77■■□□□ 1.88
CLDND1-201ENST00000341181 TAF7Q15545 349 aaPredicted RBP26.77■■□□□ 1.88
CLDND1-201ENST00000341181 SEPT12Q8IYM1 358 aa26.77■■□□□ 1.88
CLDND1-201ENST00000341181 NFATC2IPQ8NCF5 419 aa26.77■■□□□ 1.88
CLDND1-201ENST00000341181 DOT1LQ8TEK3 1739 aa26.76■■□□□ 1.87
CLDND1-201ENST00000341181 EXOSC9Q06265 439 aaKnown RBP26.75■■□□□ 1.87
CLDND1-201ENST00000341181 KRT24Q2M2I5 525 aa26.75■■□□□ 1.87
CLDND1-201ENST00000341181 KDM3BQ7LBC6 1761 aa26.75■■□□□ 1.87
CLDND1-201ENST00000341181 FAM182BQ5T319 152 aa26.74■■□□□ 1.87
CLDND1-201ENST00000341181 POTEAQ6S8J7 498 aa26.74■■□□□ 1.87
CLDND1-201ENST00000341181 KCNQ3O43525 872 aa26.73■■□□□ 1.87
CLDND1-201ENST00000341181 RBM6P78332 1123 aaKnown RBP26.73■■□□□ 1.87
CLDND1-201ENST00000341181 BTBD11A6QL63 1104 aa26.73■■□□□ 1.87
CLDND1-201ENST00000341181 FKBP8Q14318 412 aa26.73■■□□□ 1.87
CLDND1-201ENST00000341181 CABP4P57796 275 aa26.72■■□□□ 1.87
CLDND1-201ENST00000341181 TSPYL6Q8N831 410 aa26.71■■□□□ 1.87
CLDND1-201ENST00000341181 ERVV-2B6SEH9 535 aa26.71■■□□□ 1.87
CLDND1-201ENST00000341181 SLC39A6Q13433 755 aa26.71■■□□□ 1.87
CLDND1-201ENST00000341181 BRWD3Q6RI45 1802 aa26.71■■□□□ 1.87
CLDND1-201ENST00000341181 ITGB4P16144 1822 aa26.7■■□□□ 1.87
CLDND1-201ENST00000341181 C8orf58Q8NAV2 365 aa26.7■■□□□ 1.87
CLDND1-201ENST00000341181 ELL2O00472 640 aaPredicted RBP26.69■■□□□ 1.86
CLDND1-201ENST00000341181 KAT6BQ8WYB5 2073 aa26.69■■□□□ 1.86
CLDND1-201ENST00000341181 ACSBG1Q96GR2 724 aa26.68■■□□□ 1.86
CLDND1-201ENST00000341181 RXRBP28702 533 aa26.67■■□□□ 1.86
CLDND1-201ENST00000341181 SYTL4Q96C24 671 aaPredicted RBP26.67■■□□□ 1.86
CLDND1-201ENST00000341181 BABAM1Q9NWV8 329 aa26.67■■□□□ 1.86
CLDND1-201ENST00000341181 RGS12O14924 1447 aa26.67■■□□□ 1.86
CLDND1-201ENST00000341181 PIGBQ92521 554 aa26.66■■□□□ 1.86
CLDND1-201ENST00000341181 TMOD3Q9NYL9 352 aa26.66■■□□□ 1.86
CLDND1-201ENST00000341181 PRIM1P49642 420 aaKnown RBP26.65■■□□□ 1.86
CLDND1-201ENST00000341181 RCAN3Q9UKA8 241 aa26.65■■□□□ 1.86
CLDND1-201ENST00000341181 PAPPAQ13219 1627 aa26.65■■□□□ 1.86
CLDND1-201ENST00000341181 BCL9O00512 1426 aa26.65■■□□□ 1.86
CLDND1-201ENST00000341181 IRX6P78412 446 aaPredicted RBP26.65■■□□□ 1.86
CLDND1-201ENST00000341181 ZNF790Q6PG37 636 aa26.65■■□□□ 1.86
CLDND1-201ENST00000341181 EIF4A1P60842 406 aaKnown RBP26.64■■□□□ 1.85
CLDND1-201ENST00000341181 KCNQ2O43526 872 aa26.63■■□□□ 1.85
CLDND1-201ENST00000341181 TWISTNBQ3B726 338 aaPredicted RBP26.63■■□□□ 1.85
CLDND1-201ENST00000341181 PTF1AQ7RTS3 328 aa26.61■■□□□ 1.85
CLDND1-201ENST00000341181 VAMP4O75379 141 aa26.61■■□□□ 1.85
CLDND1-201ENST00000341181 BCL2L13Q9BXK5 485 aa26.61■■□□□ 1.85
CLDND1-201ENST00000341181 KRT27Q7Z3Y8 459 aa26.6■■□□□ 1.85
CLDND1-201ENST00000341181 ASAP1Q9ULH1 1129 aa26.6■■□□□ 1.85
CLDND1-201ENST00000341181 UBR2Q8IWV8 1755 aa26.6■■□□□ 1.85
CLDND1-201ENST00000341181 KCPQ6ZWJ8 1503 aa26.6■■□□□ 1.85
CLDND1-201ENST00000341181 ZNF496Q96IT1 587 aaPredicted RBP26.6■■□□□ 1.85
CLDND1-201ENST00000341181 PRAMEF22A3QJZ6 481 aa26.59■■□□□ 1.85
CLDND1-201ENST00000341181 BCAR3O75815 825 aa26.58■■□□□ 1.85
CLDND1-201ENST00000341181 RARSP54136 660 aaKnown RBP26.58■■□□□ 1.85
CLDND1-201ENST00000341181 HEG1Q9ULI3 1381 aa26.58■■□□□ 1.85
CLDND1-201ENST00000341181 TTC5Q8N0Z6 440 aa26.58■■□□□ 1.85
CLDND1-201ENST00000341181 TCERG1O14776 1098 aaKnown RBP26.57■■□□□ 1.84
CLDND1-201ENST00000341181 C5P01031 1676 aa26.57■■□□□ 1.84
CLDND1-201ENST00000341181 ATG3Q9NT62 314 aa26.57■■□□□ 1.84
CLDND1-201ENST00000341181 NHSQ6T4R5 1651 aa26.56■■□□□ 1.84
CLDND1-201ENST00000341181 CT47B1P0C2W7 299 aaPredicted RBP26.56■■□□□ 1.84
CLDND1-201ENST00000341181 SBF2Q86WG5 1849 aa26.56■■□□□ 1.84
CLDND1-201ENST00000341181 NEFLP07196 543 aa26.56■■□□□ 1.84
CLDND1-201ENST00000341181 PTCD1O75127 700 aaKnown RBP26.55■■□□□ 1.84
CLDND1-201ENST00000341181 SSH1Q8WYL5 1049 aa26.55■■□□□ 1.84
CLDND1-201ENST00000341181 GIGYF1O75420 1035 aaPredicted RBP26.54■■□□□ 1.84
CLDND1-201ENST00000341181 NECTIN2Q92692 538 aa26.54■■□□□ 1.84
CLDND1-201ENST00000341181 FMNL2Q96PY5 1086 aa26.52■■□□□ 1.84
CLDND1-201ENST00000341181 BTAF1O14981 1849 aa26.51■■□□□ 1.83
CLDND1-201ENST00000341181 PLIN1O60240 522 aa26.51■■□□□ 1.83
CLDND1-201ENST00000341181 SMC4Q9NTJ3 1288 aa26.51■■□□□ 1.83
CLDND1-201ENST00000341181 RNF123Q5XPI4 1314 aa26.49■■□□□ 1.83
CLDND1-201ENST00000341181 EIF2S2P20042 333 aaKnown RBP26.48■■□□□ 1.83
CLDND1-201ENST00000341181 SLC4A9Q96Q91 983 aa26.48■■□□□ 1.83
CLDND1-201ENST00000341181 RRP1P56182 461 aaKnown RBP26.48■■□□□ 1.83
CLDND1-201ENST00000341181 HDGFL1Q5TGJ6 251 aa26.48■■□□□ 1.83
CLDND1-201ENST00000341181 FAM196AQ6ZSG2 479 aa26.48■■□□□ 1.83
CLDND1-201ENST00000341181 HOXB7P09629 217 aa26.47■■□□□ 1.83
CLDND1-201ENST00000341181 ZNF428Q96B54 188 aa26.47■■□□□ 1.83
CLDND1-201ENST00000341181 RBM42Q9BTD8 480 aaKnown RBP26.47■■□□□ 1.83
CLDND1-201ENST00000341181 PALLDQ8WX93 1383 aa26.47■■□□□ 1.83
CLDND1-201ENST00000341181 ALDH1L2Q3SY69 923 aa26.46■■□□□ 1.83
CLDND1-201ENST00000341181 SNRPA1P09661 255 aaKnown RBP26.46■■□□□ 1.83
CLDND1-201ENST00000341181 USP16Q9Y5T5 823 aa26.46■■□□□ 1.83
CLDND1-201ENST00000341181 LAMB4A4D0S4 1761 aa26.45■■□□□ 1.82
CLDND1-201ENST00000341181 SOS1Q07889 1333 aaPredicted RBP26.44■■□□□ 1.82
CLDND1-201ENST00000341181 TRIM37O94972 964 aa26.44■■□□□ 1.82
CLDND1-201ENST00000341181 MRPL50Q8N5N7 158 aaKnown RBP26.44■■□□□ 1.82
CLDND1-201ENST00000341181 FRAT1Q92837 279 aaPredicted RBP26.44■■□□□ 1.82
CLDND1-201ENST00000341181 ANXA1P04083 346 aa26.43■■□□□ 1.82
CLDND1-201ENST00000341181 CHPF2Q9P2E5 772 aa26.43■■□□□ 1.82
CLDND1-201ENST00000341181 TJP1Q07157 1748 aa26.42■■□□□ 1.82
CLDND1-201ENST00000341181 TNNQ9UQP3 1299 aa26.42■■□□□ 1.82
CLDND1-201ENST00000341181 PROSER3Q2NL68 480 aa26.41■■□□□ 1.82
CLDND1-201ENST00000341181 CCDC30Q5VVM6 783 aa26.41■■□□□ 1.82
CLDND1-201ENST00000341181 BCL11BQ9C0K0 894 aaPredicted RBP26.41■■□□□ 1.82
CLDND1-201ENST00000341181 SLC4A2P04920 1241 aa26.41■■□□□ 1.82
CLDND1-201ENST00000341181 PIP4K2AP48426 406 aaPredicted RBP26.41■■□□□ 1.82
CLDND1-201ENST00000341181 C20orf194Q5TEA3 1177 aa26.4■■□□□ 1.82
CLDND1-201ENST00000341181 DNAJC10Q8IXB1 793 aa26.4■■□□□ 1.82
CLDND1-201ENST00000341181 LOC102724428A0A0B4J2F2 783 aa26.4■■□□□ 1.82
CLDND1-201ENST00000341181 SIK1P57059 783 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms