RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ERVV-2B6SEH9 535 aa23.18■■□□□ 1.3
BRCC3-202ENST00000340647 AMOTQ4VCS5 1084 aa23.18■■□□□ 1.3
BRCC3-202ENST00000340647 DCAF5Q96JK2 942 aa23.18■■□□□ 1.3
BRCC3-202ENST00000340647 ARXQ96QS3 562 aa23.18■■□□□ 1.3
BRCC3-202ENST00000340647 MYH14Q7Z406 1995 aaKnown RBP23.18■■□□□ 1.3
BRCC3-202ENST00000340647 ADAMTS7Q9UKP4 1686 aa23.17■■□□□ 1.3
BRCC3-202ENST00000340647 MAP3K5Q99683 1374 aa23.16■■□□□ 1.3
BRCC3-202ENST00000340647 HMOX1P09601 288 aa23.16■■□□□ 1.3
BRCC3-202ENST00000340647 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
BRCC3-202ENST00000340647 GOLGB1Q14789 3259 aaKnown RBP23.14■■□□□ 1.3
BRCC3-202ENST00000340647 DIAPH1O60610 1272 aaKnown RBP23.13■■□□□ 1.29
BRCC3-202ENST00000340647 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
BRCC3-202ENST00000340647 CHD4Q14839 1912 aa23.12■■□□□ 1.29
BRCC3-202ENST00000340647 TJP1Q07157 1748 aa23.11■■□□□ 1.29
BRCC3-202ENST00000340647 ATP6V1AP38606 617 aa23.11■■□□□ 1.29
BRCC3-202ENST00000340647 LGR6Q9HBX8 967 aa23.11■■□□□ 1.29
BRCC3-202ENST00000340647 MTHFSDQ2M296 383 aaKnown RBP23.1■■□□□ 1.29
BRCC3-202ENST00000340647 MSL1Q68DK7 614 aa23.1■■□□□ 1.29
BRCC3-202ENST00000340647 NFATC2IPQ8NCF5 419 aa23.1■■□□□ 1.29
BRCC3-202ENST00000340647 CICQ96RK0 1608 aaPredicted RBP23.1■■□□□ 1.29
BRCC3-202ENST00000340647 MRC1P22897 1456 aa23.09■■□□□ 1.29
BRCC3-202ENST00000340647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.08■■□□□ 1.29
BRCC3-202ENST00000340647 CABP4P57796 275 aa23.08■■□□□ 1.29
BRCC3-202ENST00000340647 AKAP4Q5JQC9 854 aa23.08■■□□□ 1.29
BRCC3-202ENST00000340647 C1orf141Q5JVX7 400 aa23.08■■□□□ 1.29
BRCC3-202ENST00000340647 MSH5O43196 834 aa23.07■■□□□ 1.28
BRCC3-202ENST00000340647 AK7Q96M32 723 aa23.07■■□□□ 1.28
BRCC3-202ENST00000340647 POLD1P28340 1107 aa23.06■■□□□ 1.28
BRCC3-202ENST00000340647 NLGN2Q8NFZ4 835 aa23.06■■□□□ 1.28
BRCC3-202ENST00000340647 SIPA1L3O60292 1781 aaPredicted RBP23.06■■□□□ 1.28
BRCC3-202ENST00000340647 C4AP0C0L4 1744 aa23.05■■□□□ 1.28
BRCC3-202ENST00000340647 PHF14O94880 888 aa23.05■■□□□ 1.28
BRCC3-202ENST00000340647 PPP2R1AP30153 589 aa23.05■■□□□ 1.28
BRCC3-202ENST00000340647 FLAD1Q8NFF5 587 aa23.05■■□□□ 1.28
BRCC3-202ENST00000340647 RNMTO43148 476 aaKnown RBP23.04■■□□□ 1.28
BRCC3-202ENST00000340647 SSFA2P28290 1259 aa23.04■■□□□ 1.28
BRCC3-202ENST00000340647 RBM42Q9BTD8 480 aaKnown RBP23.04■■□□□ 1.28
BRCC3-202ENST00000340647 UBR2Q8IWV8 1755 aa23.04■■□□□ 1.28
BRCC3-202ENST00000340647 GNPATO15228 680 aa23.03■■□□□ 1.28
BRCC3-202ENST00000340647 HMGB2P26583 209 aaKnown RBP23.02■■□□□ 1.28
BRCC3-202ENST00000340647 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
BRCC3-202ENST00000340647 KCPQ6ZWJ8 1503 aa23.02■■□□□ 1.28
BRCC3-202ENST00000340647 PTCD1O75127 700 aaKnown RBP23.01■■□□□ 1.27
BRCC3-202ENST00000340647 RC3H1Q5TC82 1133 aaKnown RBP23.01■■□□□ 1.27
BRCC3-202ENST00000340647 U2SURPO15042 1029 aaKnown RBP23■■□□□ 1.27
BRCC3-202ENST00000340647 PHACTR3Q96KR7 559 aa23■■□□□ 1.27
BRCC3-202ENST00000340647 CNTNAP4Q9C0A0 1308 aa23■■□□□ 1.27
BRCC3-202ENST00000340647 GPR162Q16538 588 aa22.99■■□□□ 1.27
BRCC3-202ENST00000340647 RSPH6AQ9H0K4 717 aa22.99■■□□□ 1.27
BRCC3-202ENST00000340647 C1QTNF8P60827 252 aa22.98■■□□□ 1.27
BRCC3-202ENST00000340647 SLC39A6Q13433 755 aa22.98■■□□□ 1.27
BRCC3-202ENST00000340647 KLHL34Q8N239 644 aa22.98■■□□□ 1.27
BRCC3-202ENST00000340647 IL17REQ8NFR9 667 aa22.98■■□□□ 1.27
BRCC3-202ENST00000340647 KIAA1551Q9HCM1 1747 aa22.97■■□□□ 1.27
BRCC3-202ENST00000340647 KIF13BQ9NQT8 1826 aa22.97■■□□□ 1.27
BRCC3-202ENST00000340647 RPS6KA4O75676 772 aa22.96■■□□□ 1.27
BRCC3-202ENST00000340647 ARHGEF1Q92888 912 aaKnown RBP22.96■■□□□ 1.27
BRCC3-202ENST00000340647 INTS5Q6P9B9 1019 aaKnown RBP22.95■■□□□ 1.26
BRCC3-202ENST00000340647 RTCBQ9Y3I0 505 aaKnown RBP22.95■■□□□ 1.26
BRCC3-202ENST00000340647 SENP3-EIF4A1A0A087X0R7 540 aa22.94■■□□□ 1.26
BRCC3-202ENST00000340647 CRKLP46109 303 aaKnown RBP22.94■■□□□ 1.26
BRCC3-202ENST00000340647 YBX3P16989 372 aaKnown RBP eCLIP22.93■■□□□ 1.26
BRCC3-202ENST00000340647 PRKAR2BP31323 418 aa22.93■■□□□ 1.26
BRCC3-202ENST00000340647 TRAPPC3LQ5T215 181 aa22.93■■□□□ 1.26
BRCC3-202ENST00000340647 DNAJC10Q8IXB1 793 aa22.93■■□□□ 1.26
BRCC3-202ENST00000340647 CD2APQ9Y5K6 639 aa22.93■■□□□ 1.26
BRCC3-202ENST00000340647 DLG5Q8TDM6 1919 aa22.92■■□□□ 1.26
BRCC3-202ENST00000340647 CEMIPQ8WUJ3 1361 aa22.91■■□□□ 1.26
BRCC3-202ENST00000340647 GYS1P13807 737 aa22.91■■□□□ 1.26
BRCC3-202ENST00000340647 GNAT3A8MTJ3 354 aa22.9■■□□□ 1.26
BRCC3-202ENST00000340647 ADRA2BP18089 450 aa22.9■■□□□ 1.26
BRCC3-202ENST00000340647 PELP1Q8IZL8 1130 aaKnown RBP22.9■■□□□ 1.26
BRCC3-202ENST00000340647 GAS2L2Q8NHY3 880 aa22.9■■□□□ 1.26
BRCC3-202ENST00000340647 CFAP53Q96M91 514 aa22.9■■□□□ 1.26
BRCC3-202ENST00000340647 N4BP2Q86UW6 1770 aaPredicted RBP22.89■■□□□ 1.26
BRCC3-202ENST00000340647 CYP19A1P11511 503 aaPredicted RBP22.89■■□□□ 1.25
BRCC3-202ENST00000340647 CEP350Q5VT06 3117 aa22.89■■□□□ 1.25
BRCC3-202ENST00000340647 MMP10P09238 476 aa22.88■■□□□ 1.25
BRCC3-202ENST00000340647 SRP68Q9UHB9 627 aaKnown RBP22.88■■□□□ 1.25
BRCC3-202ENST00000340647 U2AF1L5P0DN76 240 aaPredicted RBP22.87■■□□□ 1.25
BRCC3-202ENST00000340647 U2AF1Q01081 240 aaKnown RBP eCLIP22.87■■□□□ 1.25
BRCC3-202ENST00000340647 BRCA1P38398 1863 aaKnown RBP22.86■■□□□ 1.25
BRCC3-202ENST00000340647 SOS1Q07889 1333 aaPredicted RBP22.85■■□□□ 1.25
BRCC3-202ENST00000340647 KCNQ3O43525 872 aa22.85■■□□□ 1.25
BRCC3-202ENST00000340647 FCHSD2O94868 740 aa22.85■■□□□ 1.25
BRCC3-202ENST00000340647 ZNF496Q96IT1 587 aaPredicted RBP22.85■■□□□ 1.25
BRCC3-202ENST00000340647 CCDC87Q9NVE4 849 aa22.85■■□□□ 1.25
BRCC3-202ENST00000340647 USP42Q9H9J4 1324 aaKnown RBP22.84■■□□□ 1.25
BRCC3-202ENST00000340647 RFC4P35249 363 aa22.84■■□□□ 1.25
BRCC3-202ENST00000340647 VSIG10Q8N0Z9 540 aa22.84■■□□□ 1.25
BRCC3-202ENST00000340647 NLGN1Q8N2Q7 840 aa22.84■■□□□ 1.25
BRCC3-202ENST00000340647 NUDCQ9Y266 331 aa22.84■■□□□ 1.25
BRCC3-202ENST00000340647 ZBTB1Q9Y2K1 713 aa22.84■■□□□ 1.25
BRCC3-202ENST00000340647 AFDNP55196 1824 aaKnown RBP22.83■■□□□ 1.25
BRCC3-202ENST00000340647 GIGYF1O75420 1035 aaPredicted RBP22.83■■□□□ 1.25
BRCC3-202ENST00000340647 FKBP8Q14318 412 aa22.83■■□□□ 1.25
BRCC3-202ENST00000340647 ZNF790Q6PG37 636 aa22.83■■□□□ 1.25
BRCC3-202ENST00000340647 C10orf71Q711Q0 1435 aa22.82■■□□□ 1.24
BRCC3-202ENST00000340647 PXDNLA1KZ92 1463 aa22.82■■□□□ 1.24
BRCC3-202ENST00000340647 HEG1Q9ULI3 1381 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms