RNA–Protein interactions for RNA: ENST00000340042.1

GLI4-201, Transcript of GLI family zinc finger 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GLI4, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI4-201ENST00000340042 PPP2R1AP30153 589 aa28.87■■■□□ 2.21
GLI4-201ENST00000340042 MSH5O43196 834 aa28.86■■■□□ 2.21
GLI4-201ENST00000340042 AK7Q96M32 723 aa28.86■■■□□ 2.21
GLI4-201ENST00000340042 ATP6V1AP38606 617 aa28.84■■■□□ 2.21
GLI4-201ENST00000340042 COL23A1Q86Y22 540 aaPredicted RBP28.84■■■□□ 2.21
GLI4-201ENST00000340042 MAP3K5Q99683 1374 aa28.84■■■□□ 2.21
GLI4-201ENST00000340042 MTHFSDQ2M296 383 aaKnown RBP28.83■■■□□ 2.21
GLI4-201ENST00000340042 LINC00116Q8NCU8 138 aa28.83■■■□□ 2.21
GLI4-201ENST00000340042 ITPK1Q13572 414 aa28.82■■■□□ 2.2
GLI4-201ENST00000340042 SCN11AQ9UI33 1791 aa28.82■■■□□ 2.2
GLI4-201ENST00000340042 POLD1P28340 1107 aa28.81■■■□□ 2.2
GLI4-201ENST00000340042 NFATC2IPQ8NCF5 419 aa28.81■■■□□ 2.2
GLI4-201ENST00000340042 FLAD1Q8NFF5 587 aa28.81■■■□□ 2.2
GLI4-201ENST00000340042 RBM42Q9BTD8 480 aaKnown RBP28.81■■■□□ 2.2
GLI4-201ENST00000340042 NUDCQ9Y266 331 aa28.79■■■□□ 2.2
GLI4-201ENST00000340042 PHF14O94880 888 aa28.77■■■□□ 2.2
GLI4-201ENST00000340042 LGR6Q9HBX8 967 aa28.77■■■□□ 2.2
GLI4-201ENST00000340042 MRC1P22897 1456 aa28.77■■■□□ 2.2
GLI4-201ENST00000340042 COL24A1Q17RW2 1714 aa28.77■■■□□ 2.2
GLI4-201ENST00000340042 ZNF831Q5JPB2 1677 aa28.76■■■□□ 2.2
GLI4-201ENST00000340042 RNMTO43148 476 aaKnown RBP28.76■■■□□ 2.19
GLI4-201ENST00000340042 AMIGO3Q86WK7 504 aa28.76■■■□□ 2.19
GLI4-201ENST00000340042 SLC4A9Q96Q91 983 aa28.76■■■□□ 2.19
GLI4-201ENST00000340042 SLC52A2Q9HAB3 445 aa28.76■■■□□ 2.19
GLI4-201ENST00000340042 UBR3Q6ZT12 1888 aa28.76■■■□□ 2.19
GLI4-201ENST00000340042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.74■■■□□ 2.19
GLI4-201ENST00000340042 GNPATO15228 680 aa28.74■■■□□ 2.19
GLI4-201ENST00000340042 PTCD1O75127 700 aaKnown RBP28.74■■■□□ 2.19
GLI4-201ENST00000340042 SSFA2P28290 1259 aa28.74■■■□□ 2.19
GLI4-201ENST00000340042 MSL1Q68DK7 614 aa28.74■■■□□ 2.19
GLI4-201ENST00000340042 GAS2L2Q8NHY3 880 aa28.74■■■□□ 2.19
GLI4-201ENST00000340042 ADAMTS7Q9UKP4 1686 aa28.73■■■□□ 2.19
GLI4-201ENST00000340042 U2AF1L5P0DN76 240 aaPredicted RBP28.73■■■□□ 2.19
GLI4-201ENST00000340042 PRKAR2BP31323 418 aa28.73■■■□□ 2.19
GLI4-201ENST00000340042 U2AF1Q01081 240 aaKnown RBP eCLIP28.73■■■□□ 2.19
GLI4-201ENST00000340042 RSPH6AQ9H0K4 717 aa28.73■■■□□ 2.19
GLI4-201ENST00000340042 SMIM5Q71RC9 77 aa28.72■■■□□ 2.19
GLI4-201ENST00000340042 KLHL34Q8N239 644 aa28.7■■■□□ 2.19
GLI4-201ENST00000340042 VIRMAQ69YN4 1812 aaKnown RBP28.7■■■□□ 2.18
GLI4-201ENST00000340042 COL5A3P25940 1745 aaPredicted RBP28.7■■■□□ 2.18
GLI4-201ENST00000340042 DDX10Q13206 875 aaKnown RBP28.69■■■□□ 2.18
GLI4-201ENST00000340042 GPR162Q16538 588 aa28.69■■■□□ 2.18
GLI4-201ENST00000340042 ZNF784Q8NCA9 323 aaPredicted RBP28.69■■■□□ 2.18
GLI4-201ENST00000340042 CNTNAP4Q9C0A0 1308 aa28.69■■■□□ 2.18
GLI4-201ENST00000340042 GNAT3A8MTJ3 354 aa28.69■■■□□ 2.18
GLI4-201ENST00000340042 PHACTR3Q96KR7 559 aa28.68■■■□□ 2.18
GLI4-201ENST00000340042 RTCBQ9Y3I0 505 aaKnown RBP28.67■■■□□ 2.18
GLI4-201ENST00000340042 FCHSD2O94868 740 aa28.66■■■□□ 2.18
GLI4-201ENST00000340042 SLC39A6Q13433 755 aa28.66■■■□□ 2.18
GLI4-201ENST00000340042 RC3H1Q5TC82 1133 aaKnown RBP28.66■■■□□ 2.18
GLI4-201ENST00000340042 CICQ96RK0 1608 aaPredicted RBP28.65■■■□□ 2.18
GLI4-201ENST00000340042 TJP1Q07157 1748 aa28.64■■■□□ 2.18
GLI4-201ENST00000340042 CHD4Q14839 1912 aa28.64■■■□□ 2.17
GLI4-201ENST00000340042 TEFQ10587 303 aa28.63■■■□□ 2.17
GLI4-201ENST00000340042 RALBP1Q15311 655 aa28.63■■■□□ 2.17
GLI4-201ENST00000340042 IL17REQ8NFR9 667 aa28.63■■■□□ 2.17
GLI4-201ENST00000340042 KCPQ6ZWJ8 1503 aa28.62■■■□□ 2.17
GLI4-201ENST00000340042 TRAPPC3LQ5T215 181 aa28.62■■■□□ 2.17
GLI4-201ENST00000340042 ADRA2BP18089 450 aa28.61■■■□□ 2.17
GLI4-201ENST00000340042 ZEB1P37275 1124 aaPredicted RBP28.61■■■□□ 2.17
GLI4-201ENST00000340042 CRKLP46109 303 aaKnown RBP28.61■■■□□ 2.17
GLI4-201ENST00000340042 UTRNP46939 3433 aa28.6■■■□□ 2.17
GLI4-201ENST00000340042 RPS6KA4O75676 772 aa28.6■■■□□ 2.17
GLI4-201ENST00000340042 TTC5Q8N0Z6 440 aa28.59■■■□□ 2.17
GLI4-201ENST00000340042 CEMIPQ8WUJ3 1361 aa28.59■■■□□ 2.17
GLI4-201ENST00000340042 DNAJC10Q8IXB1 793 aa28.58■■■□□ 2.17
GLI4-201ENST00000340042 NLGN2Q8NFZ4 835 aa28.58■■■□□ 2.17
GLI4-201ENST00000340042 MYH14Q7Z406 1995 aaKnown RBP28.58■■■□□ 2.17
GLI4-201ENST00000340042 ARHGEF1Q92888 912 aaKnown RBP28.57■■■□□ 2.16
GLI4-201ENST00000340042 UBR2Q8IWV8 1755 aa28.56■■■□□ 2.16
GLI4-201ENST00000340042 PELP1Q8IZL8 1130 aaKnown RBP28.56■■■□□ 2.16
GLI4-201ENST00000340042 SIPA1L3O60292 1781 aaPredicted RBP28.55■■■□□ 2.16
GLI4-201ENST00000340042 NEFMP07197 916 aa28.55■■■□□ 2.16
GLI4-201ENST00000340042 RFC4P35249 363 aa28.55■■■□□ 2.16
GLI4-201ENST00000340042 RTF1Q92541 710 aaKnown RBP28.55■■■□□ 2.16
GLI4-201ENST00000340042 GRIN3BO60391 1043 aa28.54■■■□□ 2.16
GLI4-201ENST00000340042 VSIG10Q8N0Z9 540 aa28.54■■■□□ 2.16
GLI4-201ENST00000340042 GOLGB1Q14789 3259 aaKnown RBP28.54■■■□□ 2.16
GLI4-201ENST00000340042 INTS5Q6P9B9 1019 aaKnown RBP28.53■■■□□ 2.16
GLI4-201ENST00000340042 ZNF790Q6PG37 636 aa28.53■■■□□ 2.16
GLI4-201ENST00000340042 CCDC87Q9NVE4 849 aa28.53■■■□□ 2.16
GLI4-201ENST00000340042 CD2APQ9Y5K6 639 aa28.53■■■□□ 2.16
GLI4-201ENST00000340042 C4AP0C0L4 1744 aa28.53■■■□□ 2.16
GLI4-201ENST00000340042 MYBBP1AQ9BQG0 1328 aaKnown RBP28.52■■■□□ 2.16
GLI4-201ENST00000340042 CYP19A1P11511 503 aaPredicted RBP28.51■■■□□ 2.15
GLI4-201ENST00000340042 MCM10Q7L590 875 aa28.51■■■□□ 2.15
GLI4-201ENST00000340042 MMP10P09238 476 aa28.5■■■□□ 2.15
GLI4-201ENST00000340042 NLGN1Q8N2Q7 840 aa28.5■■■□□ 2.15
GLI4-201ENST00000340042 ZNF496Q96IT1 587 aaPredicted RBP28.5■■■□□ 2.15
GLI4-201ENST00000340042 BTBD11A6QL63 1104 aa28.49■■■□□ 2.15
GLI4-201ENST00000340042 GYS1P13807 737 aa28.49■■■□□ 2.15
GLI4-201ENST00000340042 PLEKHF1Q96S99 279 aa28.48■■■□□ 2.15
GLI4-201ENST00000340042 HEG1Q9ULI3 1381 aa28.48■■■□□ 2.15
GLI4-201ENST00000340042 HTATSF1O43719 755 aaKnown RBP28.47■■■□□ 2.15
GLI4-201ENST00000340042 DCTN1Q14203 1278 aa28.47■■■□□ 2.15
GLI4-201ENST00000340042 PNNQ9H307 717 aaKnown RBP28.47■■■□□ 2.15
GLI4-201ENST00000340042 SOS1Q07889 1333 aaPredicted RBP28.47■■■□□ 2.15
GLI4-201ENST00000340042 YBX3P16989 372 aaKnown RBP eCLIP28.46■■■□□ 2.15
GLI4-201ENST00000340042 FMNL2Q96PY5 1086 aa28.46■■■□□ 2.15
GLI4-201ENST00000340042 USP42Q9H9J4 1324 aaKnown RBP28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms