RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 PRKCSHP14314 528 aaPredicted RBP8.29□□□□□ -1.08
ZNF28-201ENST00000339844 ZNF772Q68DY9 489 aaPredicted RBP8.29□□□□□ -1.08
ZNF28-201ENST00000339844 NGEFQ8N5V2 710 aa8.29□□□□□ -1.08
ZNF28-201ENST00000339844 EMILIN3Q9NT22 766 aa8.29□□□□□ -1.08
ZNF28-201ENST00000339844 OVOS2A0A0J9YW53 1432 aa8.29□□□□□ -1.08
ZNF28-201ENST00000339844 OVOS2Q6IE36 1432 aa8.29□□□□□ -1.08
ZNF28-201ENST00000339844 NSD3Q9BZ95 1437 aa8.29□□□□□ -1.08
ZNF28-201ENST00000339844 QTRT2Q9H974 415 aaKnown RBP8.28□□□□□ -1.08
ZNF28-201ENST00000339844 PANK3Q9H999 370 aa8.28□□□□□ -1.08
ZNF28-201ENST00000339844 PRDM11Q9NQV5 511 aa8.28□□□□□ -1.08
ZNF28-201ENST00000339844 ATRNO75882 1429 aa8.28□□□□□ -1.08
ZNF28-201ENST00000339844 CPDO75976 1380 aa8.27□□□□□ -1.09
ZNF28-201ENST00000339844 FYB1O15117 783 aa8.27□□□□□ -1.09
ZNF28-201ENST00000339844 PPM1GO15355 546 aaPredicted RBP8.27□□□□□ -1.09
ZNF28-201ENST00000339844 POTEJP0CG39 1038 aa8.27□□□□□ -1.09
ZNF28-201ENST00000339844 UNC5CLQ8IV45 518 aa8.27□□□□□ -1.09
ZNF28-201ENST00000339844 GGNBP2Q9H3C7 697 aa8.27□□□□□ -1.09
ZNF28-201ENST00000339844 BTG4Q9NY30 223 aa8.27□□□□□ -1.09
ZNF28-201ENST00000339844 NFAT5O94916 1531 aa8.27□□□□□ -1.09
ZNF28-201ENST00000339844 PLCH1Q4KWH8 1693 aa8.27□□□□□ -1.09
ZNF28-201ENST00000339844 USP54Q70EL1 1684 aa8.27□□□□□ -1.09
ZNF28-201ENST00000339844 COL14A1Q05707 1796 aaKnown RBP8.26□□□□□ -1.09
ZNF28-201ENST00000339844 ZBTB7CA1YPR0 619 aa8.26□□□□□ -1.09
ZNF28-201ENST00000339844 TESPA1A2RU30 521 aaPredicted RBP8.26□□□□□ -1.09
ZNF28-201ENST00000339844 FBLN1P23142 703 aa8.26□□□□□ -1.09
ZNF28-201ENST00000339844 DEKP35659 375 aaKnown RBP8.26□□□□□ -1.09
ZNF28-201ENST00000339844 ARHGEF25Q86VW2 580 aa8.26□□□□□ -1.09
ZNF28-201ENST00000339844 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
ZNF28-201ENST00000339844 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
ZNF28-201ENST00000339844 BACH2Q9BYV9 841 aa8.26□□□□□ -1.09
ZNF28-201ENST00000339844 TRPC5Q9UL62 973 aaPredicted RBP8.26□□□□□ -1.09
ZNF28-201ENST00000339844 CAMTA1Q9Y6Y1 1673 aa8.26□□□□□ -1.09
ZNF28-201ENST00000339844 NRAPQ86VF7 1730 aa8.26□□□□□ -1.09
ZNF28-201ENST00000339844 NPC1L1Q9UHC9 1359 aa8.25□□□□□ -1.09
ZNF28-201ENST00000339844 LMO7Q8WWI1 1683 aa8.25□□□□□ -1.09
ZNF28-201ENST00000339844 KCNH5Q8NCM2 988 aa8.25□□□□□ -1.09
ZNF28-201ENST00000339844 COG3Q96JB2 828 aa8.25□□□□□ -1.09
ZNF28-201ENST00000339844 AXIN2Q9Y2T1 843 aa8.25□□□□□ -1.09
ZNF28-201ENST00000339844 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.25□□□□□ -1.09
ZNF28-201ENST00000339844 NWD2Q9ULI1 1742 aa8.25□□□□□ -1.09
ZNF28-201ENST00000339844 AATKQ6ZMQ8 1374 aa8.24□□□□□ -1.09
ZNF28-201ENST00000339844 GLI3P10071 1580 aa8.24□□□□□ -1.09
ZNF28-201ENST00000339844 BLMP54132 1417 aaPredicted RBP8.24□□□□□ -1.09
ZNF28-201ENST00000339844 RXRBP28702 533 aa8.24□□□□□ -1.09
ZNF28-201ENST00000339844 RBM6P78332 1123 aaKnown RBP8.24□□□□□ -1.09
ZNF28-201ENST00000339844 VPS72Q15906 364 aa8.24□□□□□ -1.09
ZNF28-201ENST00000339844 RTL5Q5HYW3 569 aaPredicted RBP8.24□□□□□ -1.09
ZNF28-201ENST00000339844 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.24□□□□□ -1.09
ZNF28-201ENST00000339844 CDAN1Q8IWY9 1227 aa8.24□□□□□ -1.09
ZNF28-201ENST00000339844 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.24□□□□□ -1.09
ZNF28-201ENST00000339844 GJD4Q96KN9 370 aaPredicted RBP8.24□□□□□ -1.09
ZNF28-201ENST00000339844 STRN4Q9NRL3 753 aa8.24□□□□□ -1.09
ZNF28-201ENST00000339844 COL18A1P39060 1754 aa8.24□□□□□ -1.09
ZNF28-201ENST00000339844 RGS12O14924 1447 aa8.23□□□□□ -1.09
ZNF28-201ENST00000339844 PDIA6Q15084 440 aa8.23□□□□□ -1.09
ZNF28-201ENST00000339844 LARP1Q6PKG0 1096 aaKnown RBP8.23□□□□□ -1.09
ZNF28-201ENST00000339844 EXOC6Q8TAG9 804 aa8.23□□□□□ -1.09
ZNF28-201ENST00000339844 OXER1Q8TDS5 423 aa8.23□□□□□ -1.09
ZNF28-201ENST00000339844 KIF20BQ96Q89 1820 aa8.23□□□□□ -1.09
ZNF28-201ENST00000339844 COL5A2P05997 1499 aaPredicted RBP8.23□□□□□ -1.09
ZNF28-201ENST00000339844 CGNL1Q0VF96 1302 aa8.23□□□□□ -1.09
ZNF28-201ENST00000339844 GRXCR2A6NFK2 248 aa8.22□□□□□ -1.09
ZNF28-201ENST00000339844 RIMBP2O15034 1052 aa8.22□□□□□ -1.09
ZNF28-201ENST00000339844 RRS1Q15050 365 aaKnown RBP8.22□□□□□ -1.09
ZNF28-201ENST00000339844 CCDC9Q9Y3X0 531 aaKnown RBP8.22□□□□□ -1.09
ZNF28-201ENST00000339844 MAP3K19Q56UN5 1328 aa8.22□□□□□ -1.09
ZNF28-201ENST00000339844 SPATA31A5Q5VU36 1347 aa8.22□□□□□ -1.09
ZNF28-201ENST00000339844 SPATA31A7Q8IWB4 1347 aa8.22□□□□□ -1.09
ZNF28-201ENST00000339844 CDK12Q9NYV4 1490 aaPredicted RBP8.21□□□□□ -1.09
ZNF28-201ENST00000339844 EVI5O60447 810 aa8.21□□□□□ -1.1
ZNF28-201ENST00000339844 EVA1CP58658 441 aa8.21□□□□□ -1.1
ZNF28-201ENST00000339844 AAMPQ13685 434 aa8.21□□□□□ -1.1
ZNF28-201ENST00000339844 DOK7Q18PE1 504 aa8.21□□□□□ -1.1
ZNF28-201ENST00000339844 SPATA31A1Q5TZJ5 1347 aa8.21□□□□□ -1.1
ZNF28-201ENST00000339844 LTN1O94822 1766 aa8.2□□□□□ -1.1
ZNF28-201ENST00000339844 RGPD5Q99666 1765 aa8.2□□□□□ -1.1
ZNF28-201ENST00000339844 HOXC9P31274 260 aa8.2□□□□□ -1.1
ZNF28-201ENST00000339844 MLLT3P42568 568 aaPredicted RBP8.2□□□□□ -1.1
ZNF28-201ENST00000339844 FAM98CQ17RN3 349 aaKnown RBP8.2□□□□□ -1.1
ZNF28-201ENST00000339844 ZNF710Q8N1W2 664 aa8.2□□□□□ -1.1
ZNF28-201ENST00000339844 PTCD2Q8WV60 388 aaKnown RBP8.2□□□□□ -1.1
ZNF28-201ENST00000339844 IP6K1Q92551 441 aa8.2□□□□□ -1.1
ZNF28-201ENST00000339844 KNSTRNQ9Y448 316 aa8.2□□□□□ -1.1
ZNF28-201ENST00000339844 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
ZNF28-201ENST00000339844 ABCC6O95255 1503 aa8.19□□□□□ -1.1
ZNF28-201ENST00000339844 ONECUT3O60422 494 aaPredicted RBP8.19□□□□□ -1.1
ZNF28-201ENST00000339844 SLC34A2O95436 690 aa8.19□□□□□ -1.1
ZNF28-201ENST00000339844 TNNT2P45379 298 aaPredicted RBP8.19□□□□□ -1.1
ZNF28-201ENST00000339844 CENPQQ7L2Z9 268 aaPredicted RBP8.19□□□□□ -1.1
ZNF28-201ENST00000339844 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
ZNF28-201ENST00000339844 TRMT2AQ8IZ69 625 aaKnown RBP8.19□□□□□ -1.1
ZNF28-201ENST00000339844 PEAK1Q9H792 1746 aa8.19□□□□□ -1.1
ZNF28-201ENST00000339844 ERBB3P21860 1342 aa8.19□□□□□ -1.1
ZNF28-201ENST00000339844 WDR17Q8IZU2 1322 aa8.19□□□□□ -1.1
ZNF28-201ENST00000339844 NSD2O96028 1365 aa8.19□□□□□ -1.1
ZNF28-201ENST00000339844 ANKRD26Q9UPS8 1709 aa8.18□□□□□ -1.1
ZNF28-201ENST00000339844 CSB-PGBD3P0DP91 1061 aa8.18□□□□□ -1.1
ZNF28-201ENST00000339844 AMPHP49418 695 aa8.18□□□□□ -1.1
ZNF28-201ENST00000339844 CNGB1Q14028 1251 aaPredicted RBP8.18□□□□□ -1.1
ZNF28-201ENST00000339844 HSP90AB2PQ58FF8 381 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms