RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ATP10DQ9P241 1426 aa19.6■□□□□ 0.73
SCARB1-202ENST00000339570 FIBPO43427 364 aa19.6■□□□□ 0.73
SCARB1-202ENST00000339570 MCCP23508 829 aa19.6■□□□□ 0.73
SCARB1-202ENST00000339570 HECW2Q9P2P5 1572 aa19.59■□□□□ 0.73
SCARB1-202ENST00000339570 ANXA1P04083 346 aa19.59■□□□□ 0.73
SCARB1-202ENST00000339570 AMPHP49418 695 aa19.58■□□□□ 0.73
SCARB1-202ENST00000339570 USHBP1Q8N6Y0 703 aa19.58■□□□□ 0.72
SCARB1-202ENST00000339570 TSPY26PQ9H489 355 aa19.58■□□□□ 0.72
SCARB1-202ENST00000339570 ARHGEF40Q8TER5 1519 aa19.58■□□□□ 0.72
SCARB1-202ENST00000339570 METP08581 1390 aa19.58■□□□□ 0.72
SCARB1-202ENST00000339570 MLH3Q9UHC1 1453 aa19.58■□□□□ 0.72
SCARB1-202ENST00000339570 USP48Q86UV5 1035 aa19.58■□□□□ 0.72
SCARB1-202ENST00000339570 SLC26A8Q96RN1 970 aa19.58■□□□□ 0.72
SCARB1-202ENST00000339570 TTC12Q9H892 705 aaPredicted RBP19.58■□□□□ 0.72
SCARB1-202ENST00000339570 NOL7Q9UMY1 257 aaKnown RBP19.58■□□□□ 0.72
SCARB1-202ENST00000339570 SPG7Q9UQ90 795 aa19.58■□□□□ 0.72
SCARB1-202ENST00000339570 KNDC1Q76NI1 1749 aa19.57■□□□□ 0.72
SCARB1-202ENST00000339570 CNPY2Q9Y2B0 182 aa19.57■□□□□ 0.72
SCARB1-202ENST00000339570 ZKSCAN5Q9Y2L8 839 aa19.57■□□□□ 0.72
SCARB1-202ENST00000339570 SURF6O75683 361 aaKnown RBP19.56■□□□□ 0.72
SCARB1-202ENST00000339570 PRR36Q9H6K5 1346 aa19.56■□□□□ 0.72
SCARB1-202ENST00000339570 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
SCARB1-202ENST00000339570 ACEP12821 1306 aa19.56■□□□□ 0.72
SCARB1-202ENST00000339570 CHMLP26374 656 aa19.56■□□□□ 0.72
SCARB1-202ENST00000339570 OS9Q13438 667 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-202ENST00000339570 CPS1P31327 1500 aa19.55■□□□□ 0.72
SCARB1-202ENST00000339570 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
SCARB1-202ENST00000339570 HCLS1P14317 486 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-202ENST00000339570 FLIIQ13045 1269 aa19.55■□□□□ 0.72
SCARB1-202ENST00000339570 CWC27Q6UX04 472 aaKnown RBP19.55■□□□□ 0.72
SCARB1-202ENST00000339570 CLEC17AQ6ZS10 378 aa19.55■□□□□ 0.72
SCARB1-202ENST00000339570 PDCL3Q9H2J4 239 aa19.54■□□□□ 0.72
SCARB1-202ENST00000339570 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.54■□□□□ 0.722e-6■■□□□ 13.2
SCARB1-202ENST00000339570 SPC24Q8NBT2 197 aa19.54■□□□□ 0.72
SCARB1-202ENST00000339570 PHAXQ9H814 394 aaKnown RBP19.54■□□□□ 0.72
SCARB1-202ENST00000339570 ALKQ9UM73 1620 aa19.54■□□□□ 0.72
SCARB1-202ENST00000339570 FAM69CQ0P6D2 419 aa19.53■□□□□ 0.72
SCARB1-202ENST00000339570 CCDC39Q9UFE4 941 aa19.53■□□□□ 0.72
SCARB1-202ENST00000339570 RGS12O14924 1447 aa19.52■□□□□ 0.72
SCARB1-202ENST00000339570 BRD1O95696 1058 aa19.52■□□□□ 0.72
SCARB1-202ENST00000339570 NGDNQ8NEJ9 315 aaKnown RBP19.52■□□□□ 0.72
SCARB1-202ENST00000339570 PTPRCP08575 1304 aa19.52■□□□□ 0.71
SCARB1-202ENST00000339570 TTC21BQ7Z4L5 1316 aa19.52■□□□□ 0.71
SCARB1-202ENST00000339570 EDC4Q6P2E9 1401 aaKnown RBP19.51■□□□□ 0.71
SCARB1-202ENST00000339570 VPS37CA5D8V6 355 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-202ENST00000339570 MBD3O95983 291 aa19.51■□□□□ 0.71
SCARB1-202ENST00000339570 UBTFL1P0CB47 393 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-202ENST00000339570 CCT4P50991 539 aaKnown RBP19.51■□□□□ 0.71
SCARB1-202ENST00000339570 HAP1P54257 671 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-202ENST00000339570 GIMAP6Q6P9H5 292 aa19.51■□□□□ 0.71
SCARB1-202ENST00000339570 SRCIN1Q9C0H9 1055 aa19.5■□□□□ 0.71
SCARB1-202ENST00000339570 FERMT3Q86UX7 667 aa19.5■□□□□ 0.71
SCARB1-202ENST00000339570 PDLIM2Q96JY6 352 aa19.5■□□□□ 0.71
SCARB1-202ENST00000339570 TCEANC2Q96MN5 208 aa19.5■□□□□ 0.71
SCARB1-202ENST00000339570 CCDC83Q8IWF9 413 aa19.49■□□□□ 0.71
SCARB1-202ENST00000339570 SRGAP3O43295 1099 aa19.48■□□□□ 0.71
SCARB1-202ENST00000339570 DLG5Q8TDM6 1919 aa19.48■□□□□ 0.71
SCARB1-202ENST00000339570 FAM173BQ6P4H8 233 aa19.48■□□□□ 0.71
SCARB1-202ENST00000339570 SYAP1Q96A49 352 aaPredicted RBP19.48■□□□□ 0.71
SCARB1-202ENST00000339570 RBM33Q96EV2 1170 aaKnown RBP19.48■□□□□ 0.71
SCARB1-202ENST00000339570 IBTKQ9P2D0 1353 aaPredicted RBP19.48■□□□□ 0.71
SCARB1-202ENST00000339570 PPP1R42Q7Z4L9 355 aa19.48■□□□□ 0.71
SCARB1-202ENST00000339570 EYA1Q99502 592 aa19.48■□□□□ 0.71
SCARB1-202ENST00000339570 ADCY5O95622 1261 aa19.47■□□□□ 0.71
SCARB1-202ENST00000339570 KIAA2012Q0VF49 1180 aa19.47■□□□□ 0.71
SCARB1-202ENST00000339570 RASEFQ8IZ41 740 aa19.47■□□□□ 0.71
SCARB1-202ENST00000339570 KCNJ4P48050 445 aa19.47■□□□□ 0.71
SCARB1-202ENST00000339570 KIF20BQ96Q89 1820 aa19.47■□□□□ 0.71
SCARB1-202ENST00000339570 CASTP20810 708 aaKnown RBP19.46■□□□□ 0.71
SCARB1-202ENST00000339570 CAMK4Q16566 473 aa19.46■□□□□ 0.71
SCARB1-202ENST00000339570 NECAB1Q8N987 351 aa19.46■□□□□ 0.71
SCARB1-202ENST00000339570 AK2P54819 239 aa19.46■□□□□ 0.71
SCARB1-202ENST00000339570 HDGFL1Q5TGJ6 251 aa19.46■□□□□ 0.71
SCARB1-202ENST00000339570 CCDC9Q9Y3X0 531 aaKnown RBP19.46■□□□□ 0.71
SCARB1-202ENST00000339570 LARGE1O95461 756 aa19.45■□□□□ 0.7
SCARB1-202ENST00000339570 GNAI3P08754 354 aa19.45■□□□□ 0.7
SCARB1-202ENST00000339570 NLRP6P59044 892 aa19.45■□□□□ 0.7
SCARB1-202ENST00000339570 SMC3Q9UQE7 1217 aa19.45■□□□□ 0.7
SCARB1-202ENST00000339570 ZNF500O60304 480 aaPredicted RBP19.45■□□□□ 0.7
SCARB1-202ENST00000339570 ATP8B2P98198 1209 aa19.45■□□□□ 0.7
SCARB1-202ENST00000339570 CCDC30Q5VVM6 783 aa19.45■□□□□ 0.7
SCARB1-202ENST00000339570 CDK12Q9NYV4 1490 aaPredicted RBP19.44■□□□□ 0.7
SCARB1-202ENST00000339570 NBPF7P0C2Y1 421 aaPredicted RBP19.44■□□□□ 0.7
SCARB1-202ENST00000339570 DNM1Q05193 864 aaKnown RBP19.44■□□□□ 0.7
SCARB1-202ENST00000339570 TAOK2Q9UL54 1235 aa19.44■□□□□ 0.7
SCARB1-202ENST00000339570 DIP2CQ9Y2E4 1556 aa19.44■□□□□ 0.7
SCARB1-202ENST00000339570 FOSBP53539 338 aa19.43■□□□□ 0.7
SCARB1-202ENST00000339570 USP44Q9H0E7 712 aa19.43■□□□□ 0.7
SCARB1-202ENST00000339570 WDR33Q9C0J8 1336 aaKnown RBP19.43■□□□□ 0.7
SCARB1-202ENST00000339570 PRPF40BQ6NWY9 871 aaKnown RBP19.43■□□□□ 0.7
SCARB1-202ENST00000339570 ATP7BP35670 1465 aa19.42■□□□□ 0.7
SCARB1-202ENST00000339570 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
SCARB1-202ENST00000339570 PPFIA3O75145 1194 aa19.42■□□□□ 0.7
SCARB1-202ENST00000339570 PA2G4Q9UQ80 394 aaKnown RBP19.42■□□□□ 0.7
SCARB1-202ENST00000339570 TMEM131LA2VDJ0 1609 aa19.42■□□□□ 0.7
SCARB1-202ENST00000339570 SYT1P21579 422 aa19.42■□□□□ 0.7
SCARB1-202ENST00000339570 STK3Q13188 491 aa19.42■□□□□ 0.7
SCARB1-202ENST00000339570 JAKMIP1Q96N16 626 aaKnown RBP19.42■□□□□ 0.7
SCARB1-202ENST00000339570 MCM2P49736 904 aa19.41■□□□□ 0.7
SCARB1-202ENST00000339570 TAF7Q15545 349 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms