RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 LRRCC1Q9C099 1032 aa20.14■□□□□ 0.82
TRIM9-202ENST00000338969 SETD1BQ9UPS6 1966 aaKnown RBP20.14■□□□□ 0.81
TRIM9-202ENST00000338969 RGS12O14924 1447 aa20.14■□□□□ 0.81
TRIM9-202ENST00000338969 GDPD2Q9HCC8 539 aa20.14■□□□□ 0.81
TRIM9-202ENST00000338969 HDGFL1Q5TGJ6 251 aa20.14■□□□□ 0.81
TRIM9-202ENST00000338969 DLG5Q8TDM6 1919 aa20.13■□□□□ 0.81
TRIM9-202ENST00000338969 SURF6O75683 361 aaKnown RBP20.13■□□□□ 0.81
TRIM9-202ENST00000338969 MPNDQ8N594 471 aa20.13■□□□□ 0.81
TRIM9-202ENST00000338969 AGLP35573 1532 aa20.13■□□□□ 0.81
TRIM9-202ENST00000338969 MX1P20591 662 aa20.13■□□□□ 0.81
TRIM9-202ENST00000338969 PTPRUQ92729 1446 aa20.13■□□□□ 0.81
TRIM9-202ENST00000338969 NUCB2P80303 420 aa20.12■□□□□ 0.81
TRIM9-202ENST00000338969 DDX54Q8TDD1 881 aaKnown RBP20.12■□□□□ 0.81
TRIM9-202ENST00000338969 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
TRIM9-202ENST00000338969 OS9Q13438 667 aaPredicted RBP20.12■□□□□ 0.81
TRIM9-202ENST00000338969 CCDC30Q5VVM6 783 aa20.12■□□□□ 0.81
TRIM9-202ENST00000338969 UBTFL1P0CB47 393 aaPredicted RBP20.12■□□□□ 0.81
TRIM9-202ENST00000338969 USP6P35125 1406 aa20.12■□□□□ 0.81
TRIM9-202ENST00000338969 GNAT3A8MTJ3 354 aa20.11■□□□□ 0.81
TRIM9-202ENST00000338969 LRRC59Q96AG4 307 aaKnown RBP20.11■□□□□ 0.81
TRIM9-202ENST00000338969 DLC1Q96QB1 1528 aa20.11■□□□□ 0.81
TRIM9-202ENST00000338969 IL17REQ8NFR9 667 aa20.11■□□□□ 0.81
TRIM9-202ENST00000338969 TMX3Q96JJ7 454 aa20.1■□□□□ 0.81
TRIM9-202ENST00000338969 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
TRIM9-202ENST00000338969 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
TRIM9-202ENST00000338969 NSFL1CQ9UNZ2 370 aaKnown RBP20.09■□□□□ 0.81
TRIM9-202ENST00000338969 SIRT1Q96EB6 747 aa20.09■□□□□ 0.81
TRIM9-202ENST00000338969 CRB1P82279 1406 aa20.08■□□□□ 0.81
TRIM9-202ENST00000338969 KCNQ3O43525 872 aa20.08■□□□□ 0.81
TRIM9-202ENST00000338969 GNAI3P08754 354 aa20.08■□□□□ 0.8
TRIM9-202ENST00000338969 KLHL40Q2TBA0 621 aa20.08■□□□□ 0.8
TRIM9-202ENST00000338969 ESYT1Q9BSJ8 1104 aa20.08■□□□□ 0.8
TRIM9-202ENST00000338969 SYCE3A1L190 88 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 HOXC9P31274 260 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 LMBRD1Q9NUN5 540 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 PHF8Q9UPP1 1060 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 FLT4P35916 1363 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 KIAA0232Q92628 1395 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 ZSCAN23Q3MJ62 389 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 PLEKHG1Q9ULL1 1385 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 IL25Q9H293 177 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 ZDHHC9Q9Y397 364 aa20.07■□□□□ 0.8
TRIM9-202ENST00000338969 SRGAP3O43295 1099 aa20.06■□□□□ 0.8
TRIM9-202ENST00000338969 PRKCSHP14314 528 aaPredicted RBP20.06■□□□□ 0.8
TRIM9-202ENST00000338969 MCCP23508 829 aa20.06■□□□□ 0.8
TRIM9-202ENST00000338969 PRIM1P49642 420 aaKnown RBP20.06■□□□□ 0.8
TRIM9-202ENST00000338969 MPRIPQ6WCQ1 1025 aa20.06■□□□□ 0.8
TRIM9-202ENST00000338969 LGR6Q9HBX8 967 aa20.06■□□□□ 0.8
TRIM9-202ENST00000338969 PPP1R42Q7Z4L9 355 aa20.06■□□□□ 0.8
TRIM9-202ENST00000338969 CLCN1P35523 988 aa20.05■□□□□ 0.8
TRIM9-202ENST00000338969 RIMS1Q86UR5 1692 aaKnown RBP20.05■□□□□ 0.8
TRIM9-202ENST00000338969 CPA1P15085 419 aa20.05■□□□□ 0.8
TRIM9-202ENST00000338969 ORAI2Q96SN7 254 aa20.05■□□□□ 0.8
TRIM9-202ENST00000338969 OVOS2A0A0J9YW53 1432 aa20.05■□□□□ 0.8
TRIM9-202ENST00000338969 OVOS2Q6IE36 1432 aa20.05■□□□□ 0.8
TRIM9-202ENST00000338969 NRXN3Q9Y4C0 1643 aa20.04■□□□□ 0.8
TRIM9-202ENST00000338969 TAF7Q15545 349 aaPredicted RBP20.04■□□□□ 0.8
TRIM9-202ENST00000338969 GPT2Q8TD30 523 aa20.04■□□□□ 0.8
TRIM9-202ENST00000338969 USP44Q9H0E7 712 aa20.04■□□□□ 0.8
TRIM9-202ENST00000338969 RBSNQ9H1K0 784 aa20.04■□□□□ 0.8
TRIM9-202ENST00000338969 CHMLP26374 656 aa20.04■□□□□ 0.8
TRIM9-202ENST00000338969 ATP8B2P98198 1209 aa20.04■□□□□ 0.8
TRIM9-202ENST00000338969 CHPF2Q9P2E5 772 aa20.03■□□□□ 0.8
TRIM9-202ENST00000338969 NBPF7P0C2Y1 421 aaPredicted RBP20.03■□□□□ 0.8
TRIM9-202ENST00000338969 PTMSP20962 102 aa20.03■□□□□ 0.8
TRIM9-202ENST00000338969 ZC3H6P61129 1189 aaKnown RBP20.03■□□□□ 0.8
TRIM9-202ENST00000338969 SPG7Q9UQ90 795 aa20.03■□□□□ 0.8
TRIM9-202ENST00000338969 KIF24Q5T7B8 1368 aa20.03■□□□□ 0.8
TRIM9-202ENST00000338969 PI4KAP2A4QPH2 592 aa20.02■□□□□ 0.8
TRIM9-202ENST00000338969 CWC27Q6UX04 472 aaKnown RBP20.02■□□□□ 0.8
TRIM9-202ENST00000338969 ANKLE2Q86XL3 938 aa20.02■□□□□ 0.8
TRIM9-202ENST00000338969 PI4KAP1Q8N8J0 262 aa20.02■□□□□ 0.8
TRIM9-202ENST00000338969 SBNO1A3KN83 1393 aa20.02■□□□□ 0.8
TRIM9-202ENST00000338969 AIMP1Q12904 312 aaKnown RBP20.02■□□□□ 0.79
TRIM9-202ENST00000338969 TTC21AQ8NDW8 1320 aa20.01■□□□□ 0.79
TRIM9-202ENST00000338969 TEFQ10587 303 aa20.01■□□□□ 0.79
TRIM9-202ENST00000338969 SRCIN1Q9C0H9 1055 aa20.01■□□□□ 0.79
TRIM9-202ENST00000338969 CEP170BQ9Y4F5 1589 aaPredicted RBP20.01■□□□□ 0.79
TRIM9-202ENST00000338969 NBPF6Q5VWK0 638 aa20.01■□□□□ 0.79
TRIM9-202ENST00000338969 NBPF4Q96M43 638 aa20.01■□□□□ 0.79
TRIM9-202ENST00000338969 TMEM63CQ9P1W3 806 aa20.01■□□□□ 0.79
TRIM9-202ENST00000338969 IGSF1Q8N6C5 1336 aa20.01■□□□□ 0.79
TRIM9-202ENST00000338969 DDX17Q92841 729 aaKnown RBP20.01■□□□□ 0.79
TRIM9-202ENST00000338969 MSNP26038 577 aaKnown RBP20■□□□□ 0.79
TRIM9-202ENST00000338969 CWC22Q9HCG8 908 aaKnown RBP20■□□□□ 0.79
TRIM9-202ENST00000338969 ARHGEF10O15013 1369 aa19.99■□□□□ 0.79
TRIM9-202ENST00000338969 PLCB2Q00722 1185 aa19.99■□□□□ 0.79
TRIM9-202ENST00000338969 PA2G4Q9UQ80 394 aaKnown RBP19.99■□□□□ 0.79
TRIM9-202ENST00000338969 ZNF530Q6P9A1 599 aaPredicted RBP19.99■□□□□ 0.79
TRIM9-202ENST00000338969 ARID3AQ99856 593 aa19.99■□□□□ 0.79
TRIM9-202ENST00000338969 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.98■□□□□ 0.79
TRIM9-202ENST00000338969 TECPR2O15040 1411 aa19.98■□□□□ 0.79
TRIM9-202ENST00000338969 CCDC9Q9Y3X0 531 aaKnown RBP19.98■□□□□ 0.79
TRIM9-202ENST00000338969 CCDC173Q0VFZ6 552 aa19.97■□□□□ 0.79
TRIM9-202ENST00000338969 RHPN1Q8TCX5 695 aa19.97■□□□□ 0.79
TRIM9-202ENST00000338969 CYP2E1P05181 493 aaPredicted RBP19.97■□□□□ 0.79
TRIM9-202ENST00000338969 ISY1Q9ULR0 285 aaKnown RBP19.97■□□□□ 0.79
TRIM9-202ENST00000338969 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
TRIM9-202ENST00000338969 PRAMEF22A3QJZ6 481 aa19.96■□□□□ 0.79
TRIM9-202ENST00000338969 GADD45BO75293 160 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms