RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 LINC00116Q8NCU8 138 aa28.18■■■□□ 2.1
RAB28-203ENST00000338176 NFATC2IPQ8NCF5 419 aa28.17■■■□□ 2.1
RAB28-203ENST00000338176 CFAP53Q96M91 514 aa28.17■■■□□ 2.1
RAB28-203ENST00000338176 DDX10Q13206 875 aaKnown RBP28.16■■■□□ 2.1
RAB28-203ENST00000338176 SLC4A9Q96Q91 983 aa28.16■■■□□ 2.1
RAB28-203ENST00000338176 MSH5O43196 834 aa28.16■■■□□ 2.1
RAB28-203ENST00000338176 ATP6V1AP38606 617 aa28.15■■■□□ 2.1
RAB28-203ENST00000338176 RBM42Q9BTD8 480 aaKnown RBP28.15■■■□□ 2.1
RAB28-203ENST00000338176 VIRMAQ69YN4 1812 aaKnown RBP28.15■■■□□ 2.1
RAB28-203ENST00000338176 RNMTO43148 476 aaKnown RBP28.12■■■□□ 2.09
RAB28-203ENST00000338176 AK7Q96M32 723 aa28.12■■■□□ 2.09
RAB28-203ENST00000338176 UBR3Q6ZT12 1888 aa28.11■■■□□ 2.09
RAB28-203ENST00000338176 SLC16A10Q8TF71 515 aa28.11■■■□□ 2.09
RAB28-203ENST00000338176 PHACTR3Q96KR7 559 aa28.11■■■□□ 2.09
RAB28-203ENST00000338176 RSPH6AQ9H0K4 717 aa28.11■■■□□ 2.09
RAB28-203ENST00000338176 PHF14O94880 888 aa28.1■■■□□ 2.09
RAB28-203ENST00000338176 PRKAR2BP31323 418 aa28.1■■■□□ 2.09
RAB28-203ENST00000338176 MSL1Q68DK7 614 aa28.1■■■□□ 2.09
RAB28-203ENST00000338176 PTCD1O75127 700 aaKnown RBP28.09■■■□□ 2.09
RAB28-203ENST00000338176 U2AF1L5P0DN76 240 aaPredicted RBP28.09■■■□□ 2.09
RAB28-203ENST00000338176 U2AF1Q01081 240 aaKnown RBP eCLIP28.09■■■□□ 2.09
RAB28-203ENST00000338176 ARXQ96QS3 562 aa28.09■■■□□ 2.09
RAB28-203ENST00000338176 FHDC1Q9C0D6 1143 aaPredicted RBP28.09■■■□□ 2.09
RAB28-203ENST00000338176 SLC52A2Q9HAB3 445 aa28.09■■■□□ 2.09
RAB28-203ENST00000338176 NUDCQ9Y266 331 aa28.08■■■□□ 2.09
RAB28-203ENST00000338176 COL24A1Q17RW2 1714 aa28.08■■■□□ 2.08
RAB28-203ENST00000338176 ADAMTS7Q9UKP4 1686 aa28.07■■■□□ 2.08
RAB28-203ENST00000338176 SLC39A6Q13433 755 aa28.06■■■□□ 2.08
RAB28-203ENST00000338176 MRC1P22897 1456 aa28.05■■■□□ 2.08
RAB28-203ENST00000338176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.05■■■□□ 2.08
RAB28-203ENST00000338176 GNPATO15228 680 aa28.05■■■□□ 2.08
RAB28-203ENST00000338176 ZNF831Q5JPB2 1677 aa28.03■■■□□ 2.08
RAB28-203ENST00000338176 COL5A3P25940 1745 aaPredicted RBP28.03■■■□□ 2.08
RAB28-203ENST00000338176 IL17REQ8NFR9 667 aa28.03■■■□□ 2.08
RAB28-203ENST00000338176 GAS2L2Q8NHY3 880 aa28.03■■■□□ 2.08
RAB28-203ENST00000338176 SYT17Q9BSW7 474 aa28.03■■■□□ 2.08
RAB28-203ENST00000338176 MAP3K5Q99683 1374 aa28.03■■■□□ 2.08
RAB28-203ENST00000338176 POLD1P28340 1107 aa28.01■■■□□ 2.08
RAB28-203ENST00000338176 FLAD1Q8NFF5 587 aa28.01■■■□□ 2.08
RAB28-203ENST00000338176 MYH14Q7Z406 1995 aaKnown RBP28.01■■■□□ 2.07
RAB28-203ENST00000338176 GNAT3A8MTJ3 354 aa28.01■■■□□ 2.07
RAB28-203ENST00000338176 HMGB2P26583 209 aaKnown RBP28.01■■■□□ 2.07
RAB28-203ENST00000338176 KLHL34Q8N239 644 aa28.01■■■□□ 2.07
RAB28-203ENST00000338176 TJP1Q07157 1748 aa28■■■□□ 2.07
RAB28-203ENST00000338176 SSFA2P28290 1259 aa27.99■■■□□ 2.07
RAB28-203ENST00000338176 FCHSD2O94868 740 aa27.98■■■□□ 2.07
RAB28-203ENST00000338176 KCPQ6ZWJ8 1503 aa27.96■■■□□ 2.07
RAB28-203ENST00000338176 CNTNAP4Q9C0A0 1308 aa27.95■■■□□ 2.07
RAB28-203ENST00000338176 ZEB1P37275 1124 aaPredicted RBP27.95■■■□□ 2.06
RAB28-203ENST00000338176 RALBP1Q15311 655 aa27.95■■■□□ 2.06
RAB28-203ENST00000338176 DNAJC10Q8IXB1 793 aa27.95■■■□□ 2.06
RAB28-203ENST00000338176 CRKLP46109 303 aaKnown RBP27.94■■■□□ 2.06
RAB28-203ENST00000338176 RC3H1Q5TC82 1133 aaKnown RBP27.94■■■□□ 2.06
RAB28-203ENST00000338176 RTCBQ9Y3I0 505 aaKnown RBP27.94■■■□□ 2.06
RAB28-203ENST00000338176 SIPA1L3O60292 1781 aaPredicted RBP27.93■■■□□ 2.06
RAB28-203ENST00000338176 TEFQ10587 303 aa27.93■■■□□ 2.06
RAB28-203ENST00000338176 RPS6KA4O75676 772 aa27.91■■■□□ 2.06
RAB28-203ENST00000338176 NLGN2Q8NFZ4 835 aa27.91■■■□□ 2.06
RAB28-203ENST00000338176 ARHGEF1Q92888 912 aaKnown RBP27.91■■■□□ 2.06
RAB28-203ENST00000338176 CICQ96RK0 1608 aaPredicted RBP27.91■■■□□ 2.06
RAB28-203ENST00000338176 CEMIPQ8WUJ3 1361 aa27.91■■■□□ 2.06
RAB28-203ENST00000338176 DCTN1Q14203 1278 aa27.91■■■□□ 2.06
RAB28-203ENST00000338176 TRAPPC3LQ5T215 181 aa27.91■■■□□ 2.06
RAB28-203ENST00000338176 MCM10Q7L590 875 aa27.91■■■□□ 2.06
RAB28-203ENST00000338176 UTRNP46939 3433 aa27.91■■■□□ 2.06
RAB28-203ENST00000338176 UBR2Q8IWV8 1755 aa27.9■■■□□ 2.06
RAB28-203ENST00000338176 INTS5Q6P9B9 1019 aaKnown RBP27.9■■■□□ 2.06
RAB28-203ENST00000338176 GOLGB1Q14789 3259 aaKnown RBP27.88■■■□□ 2.05
RAB28-203ENST00000338176 KCNQ3O43525 872 aa27.88■■■□□ 2.05
RAB28-203ENST00000338176 PLEKHF1Q96S99 279 aa27.88■■■□□ 2.05
RAB28-203ENST00000338176 C4AP0C0L4 1744 aa27.87■■■□□ 2.05
RAB28-203ENST00000338176 MYBBP1AQ9BQG0 1328 aaKnown RBP27.87■■■□□ 2.05
RAB28-203ENST00000338176 CYP19A1P11511 503 aaPredicted RBP27.86■■■□□ 2.05
RAB28-203ENST00000338176 TTC5Q8N0Z6 440 aa27.86■■■□□ 2.05
RAB28-203ENST00000338176 ZNF496Q96IT1 587 aaPredicted RBP27.86■■■□□ 2.05
RAB28-203ENST00000338176 ZNF790Q6PG37 636 aa27.86■■■□□ 2.05
RAB28-203ENST00000338176 DLG5Q8TDM6 1919 aa27.85■■■□□ 2.05
RAB28-203ENST00000338176 CCDC87Q9NVE4 849 aa27.85■■■□□ 2.05
RAB28-203ENST00000338176 SRP68Q9UHB9 627 aaKnown RBP27.85■■■□□ 2.05
RAB28-203ENST00000338176 RFC4P35249 363 aa27.84■■■□□ 2.05
RAB28-203ENST00000338176 RTF1Q92541 710 aaKnown RBP27.84■■■□□ 2.05
RAB28-203ENST00000338176 ADRA2BP18089 450 aa27.83■■■□□ 2.05
RAB28-203ENST00000338176 DCAF8L1A6NGE4 600 aa27.83■■■□□ 2.05
RAB28-203ENST00000338176 BTBD11A6QL63 1104 aa27.83■■■□□ 2.05
RAB28-203ENST00000338176 GYS1P13807 737 aa27.82■■■□□ 2.04
RAB28-203ENST00000338176 MMP10P09238 476 aa27.81■■■□□ 2.04
RAB28-203ENST00000338176 VSIG10Q8N0Z9 540 aa27.81■■■□□ 2.04
RAB28-203ENST00000338176 PRKRIP1Q9H875 184 aaPredicted RBP27.81■■■□□ 2.04
RAB28-203ENST00000338176 ZBTB1Q9Y2K1 713 aa27.81■■■□□ 2.04
RAB28-203ENST00000338176 HEG1Q9ULI3 1381 aa27.8■■■□□ 2.04
RAB28-203ENST00000338176 SOS1Q07889 1333 aaPredicted RBP27.79■■■□□ 2.04
RAB28-203ENST00000338176 NEFMP07197 916 aa27.78■■■□□ 2.04
RAB28-203ENST00000338176 PELP1Q8IZL8 1130 aaKnown RBP27.78■■■□□ 2.04
RAB28-203ENST00000338176 NFE2L2Q16236 605 aa27.78■■■□□ 2.04
RAB28-203ENST00000338176 THUMPD2Q9BTF0 503 aaKnown RBP27.78■■■□□ 2.04
RAB28-203ENST00000338176 MIS18AQ9NYP9 233 aa27.78■■■□□ 2.04
RAB28-203ENST00000338176 HTATSF1O43719 755 aaKnown RBP27.77■■■□□ 2.04
RAB28-203ENST00000338176 USP42Q9H9J4 1324 aaKnown RBP27.77■■■□□ 2.04
RAB28-203ENST00000338176 CANXP27824 592 aaKnown RBP27.76■■■□□ 2.03
RAB28-203ENST00000338176 NLGN1Q8N2Q7 840 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms