RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 SRGAP3O43295 1099 aa11.92□□□□□ -0.5
MSL3-202ENST00000337339 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
MSL3-202ENST00000337339 PI4KAP2A4QPH2 592 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 PI4KAP1Q8N8J0 262 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 SNX21Q969T3 373 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 USP26Q9BXU7 913 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 CHPF2Q9P2E5 772 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 OVOS2A0A0J9YW53 1432 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 OVOS2Q6IE36 1432 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 IGSF1Q8N6C5 1336 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 ERC2O15083 957 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 RABEP1Q15276 862 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 TECPR2O15040 1411 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 MX1P20591 662 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 UPF3BQ9BZI7 483 aaKnown RBP11.91□□□□□ -0.5
MSL3-202ENST00000337339 SRCIN1Q9C0H9 1055 aa11.91□□□□□ -0.5
MSL3-202ENST00000337339 KIAA0232Q92628 1395 aa11.9□□□□□ -0.5
MSL3-202ENST00000337339 CSB-PGBD3P0DP91 1061 aa11.9□□□□□ -0.5
MSL3-202ENST00000337339 C9orf78Q9NZ63 289 aaPredicted RBP11.9□□□□□ -0.5
MSL3-202ENST00000337339 XRCC6P12956 609 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSL3-202ENST00000337339 ZGPATQ8N5A5 531 aaKnown RBP11.9□□□□□ -0.5
MSL3-202ENST00000337339 CHAMP1Q96JM3 812 aa11.9□□□□□ -0.5
MSL3-202ENST00000337339 PPP1R42Q7Z4L9 355 aa11.89□□□□□ -0.51
MSL3-202ENST00000337339 LARP6Q9BRS8 491 aaKnown RBP11.89□□□□□ -0.51
MSL3-202ENST00000337339 ARHGEF10O15013 1369 aa11.89□□□□□ -0.51
MSL3-202ENST00000337339 SETD1BQ9UPS6 1966 aaKnown RBP11.89□□□□□ -0.51
MSL3-202ENST00000337339 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
MSL3-202ENST00000337339 CRB1P82279 1406 aa11.89□□□□□ -0.51
MSL3-202ENST00000337339 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
MSL3-202ENST00000337339 PKP1Q13835 747 aa11.89□□□□□ -0.51
MSL3-202ENST00000337339 NLRP2Q9NX02 1062 aa11.89□□□□□ -0.51
MSL3-202ENST00000337339 NRXN3Q9Y4C0 1643 aa11.88□□□□□ -0.51
MSL3-202ENST00000337339 DTNBO60941 627 aa11.88□□□□□ -0.51
MSL3-202ENST00000337339 PROSER2Q86WR7 435 aaPredicted RBP11.88□□□□□ -0.51
MSL3-202ENST00000337339 USP44Q9H0E7 712 aa11.88□□□□□ -0.51
MSL3-202ENST00000337339 DDX17Q92841 729 aaKnown RBP11.88□□□□□ -0.51
MSL3-202ENST00000337339 ANKRD26Q9UPS8 1709 aa11.88□□□□□ -0.51
MSL3-202ENST00000337339 MAP3K5Q99683 1374 aa11.88□□□□□ -0.51
MSL3-202ENST00000337339 MCCP23508 829 aa11.88□□□□□ -0.51
MSL3-202ENST00000337339 CCDC9Q9Y3X0 531 aaKnown RBP11.88□□□□□ -0.51
MSL3-202ENST00000337339 USP31Q70CQ4 1352 aa11.87□□□□□ -0.51
MSL3-202ENST00000337339 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
MSL3-202ENST00000337339 GCP02774 474 aa11.87□□□□□ -0.51
MSL3-202ENST00000337339 PIP4K2AP48426 406 aaPredicted RBP11.87□□□□□ -0.51
MSL3-202ENST00000337339 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
MSL3-202ENST00000337339 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
MSL3-202ENST00000337339 MYL6BP14649 208 aa11.86□□□□□ -0.51
MSL3-202ENST00000337339 RAB3GAP1Q15042 981 aa11.86□□□□□ -0.51
MSL3-202ENST00000337339 UNC5CLQ8IV45 518 aa11.86□□□□□ -0.51
MSL3-202ENST00000337339 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
MSL3-202ENST00000337339 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
MSL3-202ENST00000337339 IP6K1Q92551 441 aa11.86□□□□□ -0.51
MSL3-202ENST00000337339 JARID2Q92833 1246 aaPredicted RBP11.86□□□□□ -0.51
MSL3-202ENST00000337339 TRIM44Q96DX7 344 aaPredicted RBP11.86□□□□□ -0.51
MSL3-202ENST00000337339 SLC39A6Q13433 755 aa11.86□□□□□ -0.51
MSL3-202ENST00000337339 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
MSL3-202ENST00000337339 SIL1Q9H173 461 aa11.86□□□□□ -0.51
MSL3-202ENST00000337339 CEP170BQ9Y4F5 1589 aaPredicted RBP11.86□□□□□ -0.51
MSL3-202ENST00000337339 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.85□□□□□ -0.51
MSL3-202ENST00000337339 CAVIN1Q6NZI2 390 aaKnown RBP11.85□□□□□ -0.51
MSL3-202ENST00000337339 CABLES1Q8TDN4 633 aa11.85□□□□□ -0.51
MSL3-202ENST00000337339 DNAAF4Q8WXU2 420 aa11.85□□□□□ -0.51
MSL3-202ENST00000337339 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
MSL3-202ENST00000337339 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
MSL3-202ENST00000337339 ANKRD24Q8TF21 1146 aa11.85□□□□□ -0.51
MSL3-202ENST00000337339 RGS12O14924 1447 aa11.85□□□□□ -0.51
MSL3-202ENST00000337339 HTATSF1O43719 755 aaKnown RBP11.85□□□□□ -0.51
MSL3-202ENST00000337339 BAG4O95429 457 aaKnown RBP11.85□□□□□ -0.51
MSL3-202ENST00000337339 CWC27Q6UX04 472 aaKnown RBP11.85□□□□□ -0.51
MSL3-202ENST00000337339 KIAA1211Q6ZU35 1233 aa11.85□□□□□ -0.51
MSL3-202ENST00000337339 GRPEL1Q9HAV7 217 aa11.85□□□□□ -0.51
MSL3-202ENST00000337339 KCNJ4P48050 445 aa11.84□□□□□ -0.51
MSL3-202ENST00000337339 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
MSL3-202ENST00000337339 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
MSL3-202ENST00000337339 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
MSL3-202ENST00000337339 ANP32BQ92688 251 aaKnown RBP11.84□□□□□ -0.51
MSL3-202ENST00000337339 PALD1Q9ULE6 856 aa11.84□□□□□ -0.51
MSL3-202ENST00000337339 MAP3K2Q9Y2U5 619 aa11.84□□□□□ -0.51
MSL3-202ENST00000337339 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.51
MSL3-202ENST00000337339 SPG7Q9UQ90 795 aa11.83□□□□□ -0.51
MSL3-202ENST00000337339 KIF24Q5T7B8 1368 aa11.83□□□□□ -0.52
MSL3-202ENST00000337339 CHRNA2Q15822 529 aa11.83□□□□□ -0.52
MSL3-202ENST00000337339 ESYT1Q9BSJ8 1104 aa11.83□□□□□ -0.52
MSL3-202ENST00000337339 MRE11P49959 708 aa11.83□□□□□ -0.52
MSL3-202ENST00000337339 NUCB2P80303 420 aa11.83□□□□□ -0.52
MSL3-202ENST00000337339 PROSER3Q2NL68 480 aa11.83□□□□□ -0.52
MSL3-202ENST00000337339 KRT28Q7Z3Y7 464 aa11.83□□□□□ -0.52
MSL3-202ENST00000337339 RHPN1Q8TCX5 695 aa11.83□□□□□ -0.52
MSL3-202ENST00000337339 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
MSL3-202ENST00000337339 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
MSL3-202ENST00000337339 CHMLP26374 656 aa11.82□□□□□ -0.52
MSL3-202ENST00000337339 ZNF330Q9Y3S2 320 aaPredicted RBP11.82□□□□□ -0.52
MSL3-202ENST00000337339 KDRP35968 1356 aa11.82□□□□□ -0.52
MSL3-202ENST00000337339 IFIT2P09913 472 aaKnown RBP11.82□□□□□ -0.52
MSL3-202ENST00000337339 SKOR2Q2VWA4 1001 aaPredicted RBP11.82□□□□□ -0.52
MSL3-202ENST00000337339 GAS2L3Q86XJ1 694 aa11.82□□□□□ -0.52
MSL3-202ENST00000337339 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
MSL3-202ENST00000337339 ITSN1Q15811 1721 aa11.81□□□□□ -0.52
MSL3-202ENST00000337339 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
MSL3-202ENST00000337339 DLG5Q8TDM6 1919 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms