RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 AKAP4Q5JQC9 854 aa8.76□□□□□ -1.01
USP16-201ENST00000334352 ATG3Q9NT62 314 aa8.76□□□□□ -1.01
USP16-201ENST00000334352 KIF7Q2M1P5 1343 aa8.76□□□□□ -1.01
USP16-201ENST00000334352 TGFB2P61812 414 aa8.75□□□□□ -1.01
USP16-201ENST00000334352 PDZRN3Q9UPQ7 1066 aa8.75□□□□□ -1.01
USP16-201ENST00000334352 DDX54Q8TDD1 881 aaKnown RBP8.75□□□□□ -1.01
USP16-201ENST00000334352 LOC102724428A0A0B4J2F2 783 aa8.75□□□□□ -1.01
USP16-201ENST00000334352 RPS6KA4O75676 772 aa8.75□□□□□ -1.01
USP16-201ENST00000334352 SIK1P57059 783 aa8.75□□□□□ -1.01
USP16-201ENST00000334352 MYH14Q7Z406 1995 aaKnown RBP8.75□□□□□ -1.01
USP16-201ENST00000334352 PXDNLA1KZ92 1463 aa8.74□□□□□ -1.01
USP16-201ENST00000334352 CEMIPQ8WUJ3 1361 aa8.74□□□□□ -1.01
USP16-201ENST00000334352 HTATSF1O43719 755 aaKnown RBP8.74□□□□□ -1.01
USP16-201ENST00000334352 TMOD3Q9NYL9 352 aa8.74□□□□□ -1.01
USP16-201ENST00000334352 ZC3H4Q9UPT8 1303 aaKnown RBP8.74□□□□□ -1.01
USP16-201ENST00000334352 AFDNP55196 1824 aaKnown RBP8.74□□□□□ -1.01
USP16-201ENST00000334352 RIC1Q4ADV7 1423 aa8.74□□□□□ -1.01
USP16-201ENST00000334352 YY1P25490 414 aa8.73□□□□□ -1.01
USP16-201ENST00000334352 LINC00116Q8NCU8 138 aa8.73□□□□□ -1.01
USP16-201ENST00000334352 ZBTB7AO95365 584 aa8.73□□□□□ -1.01
USP16-201ENST00000334352 PDGFDQ9GZP0 370 aaPredicted RBP8.73□□□□□ -1.01
USP16-201ENST00000334352 TFCP2L1Q9NZI6 479 aa8.73□□□□□ -1.01
USP16-201ENST00000334352 SOX12O15370 315 aa8.72□□□□□ -1.01
USP16-201ENST00000334352 KNSTRNQ9Y448 316 aa8.72□□□□□ -1.01
USP16-201ENST00000334352 DICER1Q9UPY3 1922 aaKnown RBP8.72□□□□□ -1.01
USP16-201ENST00000334352 MORC1Q86VD1 984 aa8.72□□□□□ -1.01
USP16-201ENST00000334352 NLGN1Q8N2Q7 840 aa8.72□□□□□ -1.01
USP16-201ENST00000334352 KAT6BQ8WYB5 2073 aa8.72□□□□□ -1.01
USP16-201ENST00000334352 LTV1Q96GA3 475 aaPredicted RBP8.72□□□□□ -1.01
USP16-201ENST00000334352 ITPK1Q13572 414 aa8.71□□□□□ -1.02
USP16-201ENST00000334352 AK7Q96M32 723 aa8.71□□□□□ -1.02
USP16-201ENST00000334352 ATF5Q9Y2D1 282 aaPredicted RBP8.71□□□□□ -1.02
USP16-201ENST00000334352 TEX13AQ9BXU3 409 aaPredicted RBP8.7□□□□□ -1.02
USP16-201ENST00000334352 ATP10DQ9P241 1426 aa8.7□□□□□ -1.02
USP16-201ENST00000334352 SOS1Q07889 1333 aaPredicted RBP8.7□□□□□ -1.02
USP16-201ENST00000334352 FBLN1P23142 703 aa8.7□□□□□ -1.02
USP16-201ENST00000334352 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
USP16-201ENST00000334352 SLC52A2Q9HAB3 445 aa8.7□□□□□ -1.02
USP16-201ENST00000334352 N4BP2Q86UW6 1770 aaPredicted RBP8.7□□□□□ -1.02
USP16-201ENST00000334352 WDR90Q96KV7 1748 aa8.7□□□□□ -1.02
USP16-201ENST00000334352 IBTKQ9P2D0 1353 aaPredicted RBP8.7□□□□□ -1.02
USP16-201ENST00000334352 SBF1O95248 1867 aa8.7□□□□□ -1.02
USP16-201ENST00000334352 SLC4A9Q96Q91 983 aa8.7□□□□□ -1.02
USP16-201ENST00000334352 TM4SF1P30408 202 aa8.69□□□□□ -1.02
USP16-201ENST00000334352 ANKRD31Q8N7Z5 1873 aa8.69□□□□□ -1.02
USP16-201ENST00000334352 A0A087WZG4 1122 aa8.69□□□□□ -1.02
USP16-201ENST00000334352 RNMTO43148 476 aaKnown RBP8.69□□□□□ -1.02
USP16-201ENST00000334352 BABAM1Q9NWV8 329 aa8.69□□□□□ -1.02
USP16-201ENST00000334352 USP42Q9H9J4 1324 aaKnown RBP8.68□□□□□ -1.02
USP16-201ENST00000334352 C1orf141Q5JVX7 400 aa8.68□□□□□ -1.02
USP16-201ENST00000334352 ZNF784Q8NCA9 323 aaPredicted RBP8.68□□□□□ -1.02
USP16-201ENST00000334352 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
USP16-201ENST00000334352 FER1L6Q2WGJ9 1857 aa8.68□□□□□ -1.02
USP16-201ENST00000334352 DIAPH1O60610 1272 aaKnown RBP8.67□□□□□ -1.02
USP16-201ENST00000334352 TRAPPC3LQ5T215 181 aa8.67□□□□□ -1.02
USP16-201ENST00000334352 ZNF530Q6P9A1 599 aaPredicted RBP8.67□□□□□ -1.02
USP16-201ENST00000334352 INTS5Q6P9B9 1019 aaKnown RBP8.67□□□□□ -1.02
USP16-201ENST00000334352 ASAP1Q9ULH1 1129 aa8.67□□□□□ -1.02
USP16-201ENST00000334352 RTCBQ9Y3I0 505 aaKnown RBP8.67□□□□□ -1.02
USP16-201ENST00000334352 HEG1Q9ULI3 1381 aa8.67□□□□□ -1.02
USP16-201ENST00000334352 DLG5Q8TDM6 1919 aa8.67□□□□□ -1.02
USP16-201ENST00000334352 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
USP16-201ENST00000334352 TIAM2Q8IVF5 1701 aa8.67□□□□□ -1.02
USP16-201ENST00000334352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.67□□□□□ -1.02
USP16-201ENST00000334352 ATP6V1AP38606 617 aa8.67□□□□□ -1.02
USP16-201ENST00000334352 CABP4P57796 275 aa8.67□□□□□ -1.02
USP16-201ENST00000334352 MPRIPQ6WCQ1 1025 aa8.67□□□□□ -1.02
USP16-201ENST00000334352 GYS1P13807 737 aa8.66□□□□□ -1.02
USP16-201ENST00000334352 MTHFSP49914 203 aa8.66□□□□□ -1.02
USP16-201ENST00000334352 LTBP3Q9NS15 1303 aa8.66□□□□□ -1.02
USP16-201ENST00000334352 CYP19A1P11511 503 aaPredicted RBP8.65□□□□□ -1.02
USP16-201ENST00000334352 YBX3P16989 372 aaKnown RBP eCLIP8.65□□□□□ -1.022e-6■□□□□ 10.3
USP16-201ENST00000334352 NARFQ9UHQ1 456 aa8.65□□□□□ -1.02
USP16-201ENST00000334352 COL11A2P13942 1736 aaPredicted RBP8.65□□□□□ -1.02
USP16-201ENST00000334352 ANKRD36CQ5JPF3 1778 aa8.65□□□□□ -1.02
USP16-201ENST00000334352 FCHSD2O94868 740 aa8.65□□□□□ -1.02
USP16-201ENST00000334352 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.02
USP16-201ENST00000334352 ARHGEF1Q92888 912 aaKnown RBP8.64□□□□□ -1.03
USP16-201ENST00000334352 SULT6B1Q6IMI4 303 aa8.64□□□□□ -1.03
USP16-201ENST00000334352 AMIGO3Q86WK7 504 aa8.64□□□□□ -1.03
USP16-201ENST00000334352 NLGN2Q8NFZ4 835 aa8.64□□□□□ -1.03
USP16-201ENST00000334352 SYTL4Q96C24 671 aaPredicted RBP8.64□□□□□ -1.03
USP16-201ENST00000334352 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
USP16-201ENST00000334352 LAMB2P55268 1798 aa8.64□□□□□ -1.03
USP16-201ENST00000334352 KCNA3P22001 575 aa8.64□□□□□ -1.03
USP16-201ENST00000334352 C1QTNF8P60827 252 aa8.64□□□□□ -1.03
USP16-201ENST00000334352 CCER1Q8TC90 406 aaPredicted RBP8.64□□□□□ -1.03
USP16-201ENST00000334352 ERBB4Q15303 1308 aa8.63□□□□□ -1.03
USP16-201ENST00000334352 KLRG2A4D1S0 409 aaPredicted RBP8.63□□□□□ -1.03
USP16-201ENST00000334352 CRKLP46109 303 aaKnown RBP8.63□□□□□ -1.03
USP16-201ENST00000334352 COL15A1P39059 1388 aa8.63□□□□□ -1.03
USP16-201ENST00000334352 POLRMTO00411 1230 aaKnown RBP8.63□□□□□ -1.03
USP16-201ENST00000334352 EIF5P55010 431 aaKnown RBP8.63□□□□□ -1.03
USP16-201ENST00000334352 ADAMTSL1Q8N6G6 1762 aa8.63□□□□□ -1.03
USP16-201ENST00000334352 GNPATO15228 680 aa8.62□□□□□ -1.03
USP16-201ENST00000334352 IL6STP40189 918 aaPredicted RBP8.62□□□□□ -1.03
USP16-201ENST00000334352 MTHFSDQ2M296 383 aaKnown RBP8.62□□□□□ -1.03
USP16-201ENST00000334352 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
USP16-201ENST00000334352 PNNQ9H307 717 aaKnown RBP8.62□□□□□ -1.03
USP16-201ENST00000334352 GNAT3A8MTJ3 354 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms